NZ_CP0492021..167766

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167766 bp
Accession: NZ_CP049202        Location: 1..167766         Organism: Escherichia coli strain PapRG-04-4       Replicon: plasmid pIncFIB


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G6Z99_RS26045 () 1..978 + 978 WP_001414517.1 RepB family plasmid replication initiator protein -
G6Z99_RS26050 () 1257..1997 - 741 WP_089586202.1 tyrosine-type recombinase/integrase -
G6Z99_RS26055 () 2118..2267 - 150 WP_164476316.1 transcriptional regulator -
G6Z99_RS26060 () 3703..4395 - 693 WP_040089280.1 Chaperone protein FaeE VF
G6Z99_RS26065 () 4388..6796 - 2409 WP_164476269.1 Outer membrane usher protein FimD VF
G6Z99_RS26070 () 6993..7523 - 531 WP_089587956.1 hypothetical protein VF
G6Z99_RS26075 () 8326..8913 - 588 WP_164476270.1 hypothetical protein -
G6Z99_RS26080 () 9205..9564 + 360 WP_164476272.1 hypothetical protein -
G6Z99_RS26085 () 10230..10619 + 390 WP_057697823.1 hypothetical protein -
G6Z99_RS26090 () 10946..11764 - 819 WP_040100202.1 hypothetical protein -
G6Z99_RS26095 () 12212..12916 - 705 WP_180932806.1 Chaperone protein FaeE VF
G6Z99_RS26100 () 13964..15454 + 1491 WP_164476274.1 Autotransporter adhesin BtaE VF
G6Z99_RS26105 () 15444..16043 + 600 WP_164476275.1 Autotransporter adhesin UpaG VF
G6Z99_RS26110 () 16233..16460 - 228 Protein_13 IS256 family transposase ISEic2 Transposase
G6Z99_RS26115 () 16549..17499 - 951 Protein_14 IS66 family transposase ISCro1 Transposase
G6Z99_RS26120 () 17657..17986 + 330 WP_001137792.1 IS66 family transposase ISEc49 Transposase
G6Z99_RS26125 () 17973..18353 + 381 WP_000957247.1 IS66 family transposase ISEc49 Transposase
G6Z99_RS26130 () 18474..19979 + 1506 WP_164476276.1 IS66 family transposase ISEc49 Transposase
G6Z99_RS26135 () 19993..20136 - 144 WP_164475337.1 hypothetical protein -
G6Z99_RS26140 () 20356..20928 + 573 WP_164476278.1 hypothetical protein -
G6Z99_RS26145 () 21437..21685 + 249 WP_096935885.1 type II toxin-antitoxin system CcdA family antitoxin -
G6Z99_RS26150 () 21685..22008 + 324 WP_096935884.1 CcdB family protein -
G6Z99_RS26155 () 22521..23084 + 564 WP_164476279.1 hypothetical protein -
G6Z99_RS26160 () 23263..23418 - 156 WP_164476281.1 hypothetical protein -
G6Z99_RS26165 () 23603..24022 + 420 WP_000422694.1 IS66 family transposase ISEc23 Transposase
G6Z99_RS26170 () 24019..24369 + 351 WP_057697740.1 IS66 family transposase IS682 Transposase
G6Z99_RS26175 () 24400..25962 + 1563 Protein_26 IS66 family transposase ISEc47 Transposase
G6Z99_RS26180 () 26193..27728 + 1536 WP_000447022.1 IS21 family transposase ISSso4 Transposase
G6Z99_RS26185 () 27745..28500 + 756 WP_001282649.1 IS21 family transposase ISSso4 Transposase
G6Z99_RS26190 () 28704..28820 + 117 Protein_29 transposase -
G6Z99_RS26195 () 28861..29016 - 156 Protein_30 IS66 family transposase ISEc49 Transposase
G6Z99_RS26200 () 29109..29747 - 639 WP_040089121.1 ParB N-terminal domain-containing protein -
G6Z99_RS26205 () 29732..30961 - 1230 WP_040089139.1 phosphoadenosine phosphosulfate reductase -
G6Z99_RS26210 () 31615..32454 - 840 WP_164475336.1 Right origin-binding protein VF
G6Z99_RS26215 () 32475..33353 - 879 WP_160521686.1 hypothetical protein -
G6Z99_RS26220 () 33388..34533 - 1146 WP_057697995.1 DUF4056 domain-containing protein -
G6Z99_RS26225 () 34626..34877 - 252 WP_040100188.1 hypothetical protein -
G6Z99_RS26230 () 35075..36022 - 948 WP_040089126.1 hypothetical protein -
G6Z99_RS26235 () 36034..36975 - 942 WP_164475335.1 VirK/YbjX family protein -
G6Z99_RS26240 () 37057..38154 - 1098 WP_164475334.1 glycosyltransferase family 4 protein -
G6Z99_RS26245 () 38164..38994 - 831 WP_040100192.1 polysaccharide deacetylase family protein -
G6Z99_RS26250 () 39180..40085 - 906 WP_052516961.1 Right origin-binding protein VF
G6Z99_RS26255 () 40385..43885 - 3501 WP_164476282.1 Autotransporter adhesin EhaG VF
G6Z99_RS26260 () 44656..45028 - 373 Protein_43 IS3 family transposase IS2 Transposase
G6Z99_RS26265 () 45251..45487 - 237 Protein_44 IS256 family transposase IS1414 Transposase
G6Z99_RS26275 () 46930..49212 - 2283 Protein_46 Tn3 family transposase -
G6Z99_RS26280 () 49368..49949 + 582 WP_001196199.1 Tn3 family transposase TnpR_Tn3 Transposase
G6Z99_RS26285 () 49994..50587 + 594 Protein_48 ISKra4 family transposase ISEc51 Transposase
G6Z99_RS26290 () 50665..52174 + 1510 Protein_49 group II intron reverse transcriptase/maturase -
G6Z99_RS26295 () 52258..52722 + 465 Protein_50 IS3 family transposase IS629 Transposase
G6Z99_RS26300 () 52949..53665 - 717 WP_072146479.1 helix-turn-helix domain-containing protein -
G6Z99_RS26305 () 54231..54848 + 618 WP_057697731.1 YfdX family protein -
G6Z99_RS26310 () 55123..55401 + 279 Protein_53 IS3 family transposase ISEc48 Transposase
G6Z99_RS26315 () 55669..56673 - 1005 WP_057697732.1 IS110 family transposase ISPlu13 Transposase
G6Z99_RS26320 () 56925..57443 - 519 WP_164476285.1 hypothetical protein -
G6Z99_RS26325 () 57443..57844 - 402 WP_164476286.1 hypothetical protein -
G6Z99_RS26330 () 57934..58215 - 282 WP_164476287.1 hypothetical protein -
G6Z99_RS26335 () 58337..58717 - 381 WP_164476288.1 hypothetical protein -
G6Z99_RS26340 () 58740..59018 - 279 WP_164476318.1 hypothetical protein -
G6Z99_RS26345 () 59082..59303 - 222 WP_164476289.1 helix-turn-helix domain-containing protein -
G6Z99_RS26350 () 59753..59962 - 210 WP_164476290.1 hypothetical protein -
G6Z99_RS26355 () 60453..61282 + 830 Protein_62 IS3 family transposase ISEc48 Transposase
G6Z99_RS26360 () 61829..62224 + 396 WP_144429266.1 hypothetical protein -
G6Z99_RS26365 () 62653..63399 - 747 WP_164476291.1 MipA/OmpV family protein -
G6Z99_RS26370 () 63908..64423 + 516 Protein_65 IS66 family transposase ISEc49 Transposase
G6Z99_RS26375 () 64740..64963 + 224 Protein_66 IS4 family transposase -
G6Z99_RS26380 () 65283..65453 - 171 WP_164476292.1 hypothetical protein -
G6Z99_RS26385 () 66105..66392 - 288 WP_186291731.1 helix-turn-helix transcriptional regulator -
G6Z99_RS26390 () 66392..66703 - 312 WP_057697738.1 type II toxin-antitoxin system RelE/ParE family toxin -
G6Z99_RS26395 () 67058..68650 - 1593 WP_164476293.1 IS66 family transposase ISEc47 Transposase
G6Z99_RS26400 () 68681..69031 - 351 WP_057697740.1 IS66 family transposase IS682 Transposase
G6Z99_RS26405 () 69028..69447 - 420 WP_000422694.1 IS66 family transposase ISEc23 Transposase
G6Z99_RS26410 () 69528..70178 - 651 Protein_73 IS66 family transposase ISEc49 Transposase
G6Z99_RS26415 () 70210..71781 - 1572 WP_164476294.1 IS66 family transposase ISCro1 Transposase
G6Z99_RS26420 () 71801..72148 - 348 WP_164476295.1 IS66 family transposase ISCro1 Transposase
G6Z99_RS26425 () 72148..72825 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
G6Z99_RS26430 () 72880..73245 - 366 Protein_77 IS66 family transposase ISEc49 Transposase
G6Z99_RS26435 () 73518..74540 - 1023 WP_164476296.1 IS110 family transposase ISEc66 Transposase
G6Z99_RS26440 () 74606..75778 + 1173 WP_164476297.1 IS21 family transposase IS21 Transposase
G6Z99_RS26445 () 75778..76575 + 798 WP_123017530.1 IS21 family transposase IS21 Transposase
G6Z99_RS26450 () 76806..76973 - 168 Protein_81 IS66 family transposase -
G6Z99_RS26455 () 77016..77396 - 381 WP_164476298.1 IS66 family transposase ISEc49 Transposase
G6Z99_RS26460 () 77383..77712 - 330 WP_001137792.1 IS66 family transposase ISEc49 Transposase
G6Z99_RS26465 () 78373..79524 - 1152 WP_061358723.1 Alcohol dehydrogenase 2 VF
G6Z99_RS26470 () 79976..80128 - 153 WP_106426530.1 Rop family plasmid primer RNA-binding protein -
G6Z99_RS26475 () 80142..80414 - 273 WP_061358403.1 hypothetical protein -
G6Z99_RS26480 () 81971..82531 - 561 WP_061361387.1 hypothetical protein -
G6Z99_RS26485 () 82528..83238 - 711 WP_061358400.1 Chaperone protein FaeE VF
G6Z99_RS26490 () 83231..85657 - 2427 WP_061358399.1 Outer membrane usher protein FimD VF
G6Z99_RS26495 () 85805..86353 - 549 WP_061358398.1 hypothetical protein VF
G6Z99_RS26500 () 86511..86750 - 240 WP_072320500.1 Major pilu subunit operon regulatory protein PapB VF
G6Z99_RS26510 () 88633..89637 - 1005 WP_158179422.1 IS110 family transposase IS4321 Transposase
G6Z99_RS26515 () 89970..90293 - 324 WP_063848438.1 type II toxin-antitoxin system RelE/ParE family toxin -
G6Z99_RS26520 () 90290..90541 - 252 WP_164476299.1 antitoxin -
G6Z99_RS26525 () 90693..90868 - 176 Protein_96 transposase -
G6Z99_RS26530 () 90872..91138 - 267 WP_063610219.1 Major pilu subunit operon regulatory protein PapB VF
G6Z99_RS26535 () 91396..92241 - 846 WP_164476300.1 AraC family transcriptional regulator -
G6Z99_RS26540 () 92765..93466 - 702 Protein_99 ISL3 family transposase ISEc38 Transposase
G6Z99_RS26545 () 93575..93805 - 231 Protein_100 colicin immunity protein Cui -
G6Z99_RS26550 () 93899..94489 + 591 WP_087901131.1 plasmid pRiA4b ORF-3 family protein -
G6Z99_RS26555 () 94625..95197 + 573 WP_052939164.1 Tn3 family transposase TnpR_TnAs2 Transposase
G6Z99_RS26560 () 95232..96635 + 1404 WP_164476301.1 ISKra4 family transposase ISEc51 Transposase
G6Z99_RS26565 () 96665..96877 + 213 Protein_104 Tn3 family transposase TnpA_ISPsy30 Transposase
G6Z99_RS26570 () 97260..97769 - 510 Protein_105 hypothetical protein -
G6Z99_RS26575 () 97847..98137 - 291 WP_158179414.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
G6Z99_RS26580 () 98127..98381 - 255 WP_097468987.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
G6Z99_RS26590 () 99259..100281 - 1023 WP_164476302.1 replication initiation protein -
G6Z99_RS26595 () 100271..100804 - 534 WP_040089446.1 replication protein -
G6Z99_RS26600 () 100797..100871 - 75 WP_001367777.1 RepA leader peptide Tap -
G6Z99_RS26605 () 101105..101362 - 258 WP_001136637.1 replication regulatory protein RepA -
G6Z99_RS26610 () 101670..102152 - 483 WP_000405250.1 GNAT family N-acetyltransferase Toxin Detail
G6Z99_RS26615 () 102143..102445 - 303 WP_072146426.1 DUF1778 domain-containing protein Antitoxin Detail
G6Z99_RS26620 () 102766..102972 - 207 WP_206438902.1 Hok/Gef family protein Toxin Detail
- () 102959..103020 + 62 NuclAT_1 - Antitoxin Detail
- () 102959..103020 + 62 NuclAT_1 - Antitoxin Detail
- () 102959..103020 + 62 NuclAT_1 - Antitoxin Detail
- () 102959..103020 + 62 NuclAT_1 - Antitoxin Detail
G6Z99_RS26625 () 103261..103470 - 210 WP_040089443.1 hemolysin expression modulator Hha -
G6Z99_RS26630 () 103527..103763 - 237 WP_061358569.1 hypothetical protein -
G6Z99_RS26635 () 104010..104570 - 561 WP_164476304.1 fertility inhibition protein FinO -
G6Z99_RS26640 () 104625..105371 - 747 WP_164476305.1 conjugal transfer pilus acetylase TraX -
G6Z99_RS26645 () 105391..110661 - 5271 WP_164476306.1 Multifunctional conjugation protein TraI Relaxase
G6Z99_RS26650 () 110661..112814 - 2154 WP_164476307.1 type IV conjugative transfer system coupling protein TraD -
G6Z99_RS26655 () 112865..113602 - 738 WP_143192297.1 hypothetical protein -
G6Z99_RS26660 () 113805..114536 - 732 WP_073521275.1 complement resistance protein TraT -
G6Z99_RS26665 () 114550..115059 - 510 WP_105517748.1 conjugal transfer entry exclusion protein TraS -
G6Z99_RS26670 () 115056..117902 - 2847 WP_164476308.1 conjugal transfer mating pair stabilization protein TraG -
G6Z99_RS26675 () 117899..119272 - 1374 WP_206438905.1 F-type conjugal transfer protein TraH -
G6Z99_RS26680 () 119259..119684 - 426 WP_164476310.1 F-type conjugal transfer protein TrbF -
G6Z99_RS26685 () 119605..119979 - 375 WP_072040280.1 P-type conjugative transfer protein TrbJ -
G6Z99_RS26690 () 119909..120454 - 546 WP_040089431.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
G6Z99_RS26695 () 120441..120725 - 285 WP_040089429.1 type-F conjugative transfer system pilin chaperone TraQ -
G6Z99_RS26700 () 120806..121120 + 315 WP_000415566.1 protein ArtA -
G6Z99_RS26705 () 121122..121469 - 348 WP_057698271.1 conjugal transfer protein TrbA -
G6Z99_RS26710 () 121485..122228 - 744 WP_057698272.1 type-F conjugative transfer system pilin assembly protein TraF -
G6Z99_RS26715 () 122221..122478 - 258 WP_000864320.1 conjugal transfer protein TrbE -
G6Z99_RS26720 () 122505..124292 - 1788 WP_164476320.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
G6Z99_RS26725 () 124603..124983 - 381 WP_039052469.1 hypothetical protein -
G6Z99_RS26730 () 124980..125618 - 639 WP_164476311.1 type-F conjugative transfer system pilin assembly protein TrbC -
G6Z99_RS26735 () 125646..126098 - 453 WP_057698276.1 hypothetical protein -
G6Z99_RS26740 () 126091..126426 - 336 WP_206438903.1 hypothetical protein -
G6Z99_RS26745 () 126455..127447 - 993 WP_000830839.1 conjugal transfer pilus assembly protein TraU -
G6Z99_RS26750 () 127444..128076 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
G6Z99_RS26755 () 128073..128453 - 381 WP_057698278.1 type-F conjugative transfer system protein TrbI -
G6Z99_RS26760 () 128537..128812 + 276 WP_160521696.1 hypothetical protein -
G6Z99_RS26765 () 128871..129644 + 774 WP_160521697.1 hypothetical protein -
G6Z99_RS26770 () 130027..132672 - 2646 WP_057698280.1 type IV secretion system protein TraC -
G6Z99_RS26775 () 132799..133161 - 363 WP_000836688.1 hypothetical protein -
G6Z99_RS26780 () 133559..133777 - 219 WP_000556751.1 hypothetical protein -
G6Z99_RS26785 () 133856..134329 - 474 WP_057698281.1 hypothetical protein -
G6Z99_RS26790 () 134322..134543 - 222 WP_001756934.1 conjugal transfer protein TraR -
G6Z99_RS26795 () 134678..135193 - 516 WP_137499815.1 type IV conjugative transfer system lipoprotein TraV -
G6Z99_RS26800 () 135190..135441 - 252 WP_032198481.1 conjugal transfer protein TrbG -
G6Z99_RS26805 () 135434..135802 - 369 WP_164476312.1 conjugal transfer protein TrbD -
G6Z99_RS26810 () 135741..136328 - 588 Protein_152 conjugal transfer protein TraP -
G6Z99_RS26815 () 136318..137745 - 1428 WP_164476313.1 conjugal transfer protein TraB -
G6Z99_RS26820 () 137745..138449 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
G6Z99_RS26825 () 138460..139026 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
G6Z99_RS26830 () 139048..139359 - 312 WP_057698286.1 type IV conjugative transfer system protein TraL -
G6Z99_RS26835 () 139374..139733 - 360 WP_019842731.1 type IV conjugative transfer system pilin TraA -
G6Z99_RS26840 () 139776..139991 - 216 WP_000086381.1 conjugal transfer relaxosome protein TraY -
G6Z99_RS26845 () 140127..140774 - 648 WP_057698287.1 conjugal transfer transcriptional regulator TraJ -
G6Z99_RS26850 () 140965..141348 - 384 WP_001063021.1 relaxosome protein TraM -
G6Z99_RS26855 () 141699..142289 + 591 WP_206438904.1 hypothetical protein VF
G6Z99_RS26860 () 142585..143406 - 822 Protein_162 DUF945 domain-containing protein -
G6Z99_RS27110 () 143525..143707 - 183 WP_089607097.1 hypothetical protein -
G6Z99_RS27115 () 144155..144472 + 318 WP_001356354.1 hypothetical protein -
G6Z99_RS26875 () 144710..144868 - 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 144933..145131 - 199 NuclAT_0 - Antitoxin Detail
- () 144933..145131 - 199 NuclAT_0 - Antitoxin Detail
- () 144933..145131 - 199 NuclAT_0 - Antitoxin Detail
- () 144933..145131 - 199 NuclAT_0 - Antitoxin Detail
G6Z99_RS26880 () 145143..145862 - 720 WP_040072503.1 plasmid SOS inhibition protein A -
G6Z99_RS26885 () 145859..146293 - 435 WP_000845926.1 conjugation system SOS inhibitor PsiB -
G6Z99_RS26890 () 146348..148306 - 1959 WP_032219150.1 ParB/RepB/Spo0J family partition protein -
G6Z99_RS26895 () 148370..148603 - 234 WP_000005988.1 DUF905 family protein -
G6Z99_RS26900 () 148666..149205 - 540 WP_032219151.1 single-stranded DNA-binding protein -
G6Z99_RS27120 () 149685..150040 + 356 Protein_171 pilus assembly protein -
G6Z99_RS26910 () 150019..150210 - 192 WP_001027497.1 hypothetical protein -
G6Z99_RS26915 () 150210..150629 - 420 WP_000271711.1 DUF1380 family protein -
G6Z99_RS26920 () 150676..150978 - 303 WP_001436678.1 antirestriction protein -
G6Z99_RS26930 () 151518..152288 - 771 WP_032219112.1 hypothetical protein -
G6Z99_RS26935 () 152333..152767 - 435 WP_040072501.1 DUF1380 family protein -
G6Z99_RS26940 () 152781..153002 - 222 WP_001104885.1 hypothetical protein -
G6Z99_RS26945 () 153003..153686 - 684 WP_032219114.1 DNA methylase -
G6Z99_RS26950 () 153763..154074 - 312 WP_032219116.1 hypothetical protein -
G6Z99_RS26955 () 154071..154973 - 903 WP_164476322.1 DUF1281 domain-containing protein -
G6Z99_RS26960 () 155391..155639 + 249 WP_164476315.1 DinI-like family protein -
G6Z99_RS26965 () 155636..156073 + 438 WP_032219119.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
G6Z99_RS26970 () 156073..157343 + 1271 Protein_183 translesion error-prone DNA polymerase V subunit UmuC -
G6Z99_RS26980 () 157348..157740 - 393 WP_000340833.1 plasmid partitioning/stability family protein -
G6Z99_RS26985 () 157745..158716 - 972 WP_001103694.1 hypothetical protein -
G6Z99_RS26990 () 158945..159589 + 645 WP_000633911.1 AAA family ATPase -
G6Z99_RS26995 () 159583..159858 + 276 WP_000239529.1 hypothetical protein -
G6Z99_RS27000 () 159996..160805 - 810 WP_040101096.1 site-specific integrase -
G6Z99_RS27005 () 160806..161111 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB -
G6Z99_RS27010 () 161113..161331 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA -
G6Z99_RS27015 () 161885..165016 - 3132 WP_012775851.1 hypothetical protein -
G6Z99_RS27020 () 165696..166900 + 1205 Protein_192 ISL3 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance