Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 101670..102445 Replicon plasmid pIncFIB
Accession NZ_CP049202
Organism Escherichia coli strain PapRG-04-4

Toxin (Protein)


Gene name tacT Uniprot ID A0A0C2EI97
Locus tag G6Z99_RS26610 Protein ID WP_000405250.1
Coordinates 101670..102152 (-) Length 161 a.a.

Antitoxin (Protein)


Gene name tacA Uniprot ID -
Locus tag G6Z99_RS26615 Protein ID WP_072146426.1
Coordinates 102143..102445 (-) Length 101 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G6Z99_RS26570 97260..97769 - 510 Protein_105 hypothetical protein -
G6Z99_RS26575 97847..98137 - 291 WP_158179414.1 type II toxin-antitoxin system RelE/ParE family toxin -
G6Z99_RS26580 98127..98381 - 255 WP_097468987.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
G6Z99_RS26590 99259..100281 - 1023 WP_164476302.1 replication initiation protein -
G6Z99_RS26595 100271..100804 - 534 WP_040089446.1 replication protein -
G6Z99_RS26600 100797..100871 - 75 WP_001367777.1 RepA leader peptide Tap -
G6Z99_RS26605 101105..101362 - 258 WP_001136637.1 replication regulatory protein RepA -
G6Z99_RS26610 101670..102152 - 483 WP_000405250.1 GNAT family N-acetyltransferase Toxin
G6Z99_RS26615 102143..102445 - 303 WP_072146426.1 DUF1778 domain-containing protein Antitoxin
G6Z99_RS26620 102766..102972 - 207 WP_206438902.1 Hok/Gef family protein -
- 102959..103020 + 62 NuclAT_1 - -
- 102959..103020 + 62 NuclAT_1 - -
- 102959..103020 + 62 NuclAT_1 - -
- 102959..103020 + 62 NuclAT_1 - -
G6Z99_RS26625 103261..103470 - 210 WP_040089443.1 hemolysin expression modulator Hha -
G6Z99_RS26630 103527..103763 - 237 WP_061358569.1 hypothetical protein -
G6Z99_RS26635 104010..104570 - 561 WP_164476304.1 fertility inhibition protein FinO -
G6Z99_RS26640 104625..105371 - 747 WP_164476305.1 conjugal transfer pilus acetylase TraX -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Conjugative plasmid - pefD / pefC / pefA 1..167766 167766


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(30-149)

Antitoxin

(19-94)


Sequences


Toxin        


Download         Length: 161 a.a.        Molecular weight: 17649.42 Da        Isoelectric Point: 7.0386

>T151012 WP_000405250.1 NZ_CP049202:c102152-101670 [Escherichia coli]
MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNASRTFVICLEGTLRVVGFYSLATGSVTHAELGRSLRHN
MPNPVPVVLLGRLAVDVCTQGHGFGKWLLSDAIHRVVNVAEQVGVKAVMVHAIDDDARAFYERFGFVQSVVAPDTLFYKV

Download         Length: 483 bp

>T151012 NZ_CP065177:c170182-170003 [Pectobacterium quasiaquaticum]
ATGGATAGCAGGACGTTAATAGCAGAAATCAAGGCCGATGGGTGGGAACTGATAAGAGTGAACGGAAGCCACCACCATTT
TATGCATCCTAGTAAACTGGGGTTAGTCACAATCCCCCACCCTAAGAAAGATTTACCGATAGGCACGGTAAAAAACATCA
GGAAACAAGCAGGAATATGA

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11630.17 Da        Isoelectric Point: 4.7174

>AT151012 WP_072146426.1 NZ_CP049202:c102445-102143 [Escherichia coli]
IEVFMSTAASVRKTPRENQINIRATDEERAVIDYAASLVNKNRTDFIIELAYQEAKNIILDQRLFVLDNERYDSFITQLE
APVQNAEGRERLMAVKPEWK

Download         Length: 303 bp

>AT151012 NZ_CP065177:c169975-169565 [Pectobacterium quasiaquaticum]
ATGTTTTATCCGATTGCAATTGAAGCAGGCGACGATACCCACGCATACGGTGTAACAGTGCCAGATCTACCGGGCTGTTT
TTCCGCAGGCGATACGCTAGACGATGCCATCGCGAATGCGAAAGAGGCGATTACCGGACATATCGAACTGCTGATCGAGA
TGGGTCAGGATATTCCTACCGTGTCTTCAGTAGGCCAATGGGCAAAAAGCGCAGAATACGCTGGGTACACGTGGGCGGTT
GTTGATATCGATGTGACGCGTTTAATGGGCGGTTCAGAAAAAATTAACGTCACGCTGCCTAAATCCCTGATTGACCGAAT
TGATCGTTGCGTGGCGAGTAATCCTGAATTTAAAAGCCGCTCAGGTTTTCTCGCGCAGGCGGCATTAGCGCGAATCTCGT
CTTCCCGATGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A0C2EI97


Antitoxin

Source ID Structure

References