MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 159741 bp
Accession: NZ_CP048631 Location: 1..159741 Organism: Ancylobacter pratisalsi strain DSM 102029 Replicon: plasmid pLGM
Accession: NZ_CP048631 Location: 1..159741 Organism: Ancylobacter pratisalsi strain DSM 102029 Replicon: plasmid pLGM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3A50_RS21510 () | 1..618 | + | 618 | WP_163078003.1 | Urease accessory protein UreG | VF |
| G3A50_RS21515 () | 615..1460 | + | 846 | WP_163078006.1 | urease accessory protein UreD | - |
| G3A50_RS21520 () | 1470..1955 | + | 486 | WP_126278341.1 | urease accessory protein UreE | - |
| G3A50_RS21525 () | 1957..2652 | + | 696 | WP_163078009.1 | urease accessory protein UreF | - |
| G3A50_RS21530 () | 2658..3167 | - | 510 | WP_163078409.1 | aliphatic amidase regulator, AmiR | - |
| G3A50_RS21535 () | 3264..4397 | - | 1134 | WP_163078011.1 | transporter substrate-binding domain-containing protein | - |
| G3A50_RS21540 () | 4489..6048 | + | 1560 | WP_163078013.1 | ABC transporter substrate-binding protein | - |
| G3A50_RS21545 () | 6271..6614 | + | 344 | Protein_7 | IS3 family transposase ISXau1 | Transposase |
| G3A50_RS21550 () | 6636..7427 | - | 792 | WP_163078015.1 | creatininase | - |
| G3A50_RS21555 () | 7488..8579 | - | 1092 | WP_163078018.1 | Trehalose import ATP-binding protein SugC | VF |
| G3A50_RS21560 () | 8576..9376 | - | 801 | WP_210255339.1 | Inner membrane ABC transporter permease protein YdcV | VF |
| G3A50_RS21565 () | 9379..10203 | - | 825 | WP_163078412.1 | ABC transporter permease | - |
| G3A50_RS21570 () | 10362..11525 | - | 1164 | WP_163078023.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| G3A50_RS21575 () | 11596..12072 | - | 477 | WP_163078025.1 | nucleoside deaminase | - |
| G3A50_RS21580 () | 12183..13970 | - | 1788 | WP_163078028.1 | hydantoinase B/oxoprolinase family protein | - |
| G3A50_RS21585 () | 13982..16054 | - | 2073 | WP_163078031.1 | hydantoinase/oxoprolinase family protein | - |
| G3A50_RS21590 () | 16126..16839 | - | 714 | WP_163078034.1 | isochorismatase family protein | - |
| G3A50_RS21595 () | 17061..17972 | + | 912 | WP_163078036.1 | LysR family transcriptional regulator | - |
| G3A50_RS21600 () | 18553..19494 | - | 942 | WP_163078038.1 | HTH-type transcriptional regulator YjiE | VF |
| G3A50_RS21605 () | 19601..20623 | + | 1023 | WP_163078041.1 | D-cysteine desulfhydrase | - |
| G3A50_RS21610 () | 20627..21835 | + | 1209 | WP_163078044.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| G3A50_RS21615 () | 21835..22533 | + | 699 | WP_163078047.1 | amino acid racemase | - |
| G3A50_RS21620 () | 22593..23585 | + | 993 | WP_163078049.1 | taurine ABC transporter substrate-binding protein | - |
| G3A50_RS21625 () | 23650..24438 | + | 789 | WP_163078052.1 | Taurine import ATP-binding protein TauB | VF |
| G3A50_RS21630 () | 24435..25304 | + | 870 | WP_163078055.1 | ABC transporter permease subunit | - |
| G3A50_RS21635 () | 25313..26623 | + | 1311 | WP_163078058.1 | histidinol dehydrogenase | - |
| G3A50_RS21640 () | 26932..27174 | + | 243 | WP_163078061.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| G3A50_RS21645 () | 27176..27508 | + | 333 | WP_163078416.1 | endoribonuclease MazF | Toxin Detail |
| G3A50_RS21650 () | 27622..29895 | - | 2274 | WP_163078063.1 | recombinase RmuC | - |
| G3A50_RS21655 () | 29892..30956 | - | 1065 | WP_163078066.1 | Type IV secretion system protein VirB11 | VF |
| G3A50_RS21660 () | 30986..32143 | - | 1158 | WP_163078069.1 | Type IV secretion system protein virB10 | VF |
| G3A50_RS21665 () | 32154..33026 | - | 873 | WP_163078073.1 | Type IV secretion system protein virB9 | VF |
| G3A50_RS21670 () | 33026..33694 | - | 669 | WP_163078419.1 | Type IV secretion system protein virB8 | VF |
| G3A50_RS21675 () | 33707..33916 | - | 210 | WP_163078000.1 | hypothetical protein | VF |
| G3A50_RS21680 () | 34007..34918 | - | 912 | WP_163078076.1 | Type IV secretion system protein VirB6 | VF |
| G3A50_RS21685 () | 34964..35197 | - | 234 | WP_126278331.1 | EexN family lipoprotein | - |
| G3A50_RS21690 () | 35194..35886 | - | 693 | WP_163078079.1 | P-type DNA transfer protein VirB5 | - |
| G3A50_RS21695 () | 35901..38258 | - | 2358 | WP_163078082.1 | Type IV secretion system protein virB4 | VF |
| G3A50_RS21700 () | 38248..38598 | - | 351 | WP_163078084.1 | Type IV secretion system protein virB3 | VF |
| G3A50_RS21705 () | 38598..38927 | - | 330 | WP_126278327.1 | Type IV secretion system protein virB2 | VF |
| G3A50_RS21710 () | 38960..39607 | - | 648 | WP_163078088.1 | Type IV secretion system protein virB1 | VF |
| G3A50_RS22475 () | 39607..40290 | - | 684 | WP_210255340.1 | hypothetical protein | - |
| G3A50_RS21720 () | 40416..40754 | + | 339 | WP_131837300.1 | MarR family transcriptional regulator | - |
| G3A50_RS21725 () | 41247..42527 | + | 1281 | WP_163078091.1 | replication initiation protein RepC | - |
| G3A50_RS21730 () | 42671..42931 | + | 261 | WP_163078094.1 | hypothetical protein | - |
| G3A50_RS21735 () | 42928..43515 | + | 588 | WP_163078097.1 | thermonuclease family protein | - |
| G3A50_RS21740 () | 43549..43828 | + | 280 | Protein_46 | TetR family transcriptional regulator | - |
| G3A50_RS21745 () | 43946..47299 | + | 3354 | WP_163078100.1 | hypothetical protein | - |
| G3A50_RS21750 () | 47705..48922 | + | 1218 | WP_163078103.1 | hypothetical protein | VF |
| G3A50_RS21755 () | 49103..50101 | + | 999 | WP_163078106.1 | plasmid partitioning protein RepB | - |
| G3A50_RS21760 () | 50290..51513 | + | 1224 | WP_163078108.1 | replication initiation protein RepC | - |
| G3A50_RS21765 () | 51585..51830 | + | 246 | WP_163078111.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| G3A50_RS21770 () | 51830..52267 | + | 438 | WP_163078114.1 | type II toxin-antitoxin system VapC family toxin | - |
| G3A50_RS21775 () | 52291..53370 | - | 1080 | WP_163078117.1 | site-specific integrase | - |
| G3A50_RS21780 () | 53370..53774 | - | 405 | WP_163078121.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G3A50_RS21785 () | 53774..54028 | - | 255 | WP_163078124.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| G3A50_RS21790 () | 54261..55217 | + | 957 | WP_163078127.1 | DUF1403 family protein | - |
| G3A50_RS21795 () | 55222..55932 | + | 711 | WP_163078130.1 | SMC-Scp complex subunit ScpB | - |
| G3A50_RS21800 () | 56197..56991 | - | 795 | WP_163078133.1 | IS21 family transposase IS1600 | Transposase |
| G3A50_RS21805 () | 56981..58015 | - | 1035 | Protein_59 | IS21 family transposase ISMex27 | Transposase |
| G3A50_RS21815 () | 59264..59752 | - | 489 | Protein_61 | IS21 family transposase ISRsp3 | Transposase |
| G3A50_RS21820 () | 59962..60420 | + | 459 | WP_163078138.1 | MarR family transcriptional regulator | - |
| G3A50_RS21825 () | 60417..61232 | + | 816 | WP_163078141.1 | NAD(P)-dependent oxidoreductase | - |
| G3A50_RS21830 () | 61512..62870 | - | 1359 | WP_163078144.1 | peptidase | - |
| G3A50_RS21835 () | 62916..63464 | - | 549 | WP_163078147.1 | hypothetical protein | - |
| G3A50_RS21840 () | 63461..64600 | - | 1140 | WP_163078150.1 | DUF3500 domain-containing protein | - |
| G3A50_RS21845 () | 64821..65537 | - | 717 | WP_163078422.1 | class I SAM-dependent methyltransferase | - |
| G3A50_RS21850 () | 65762..66319 | - | 558 | WP_163078425.1 | PadR family transcriptional regulator | - |
| G3A50_RS21855 () | 66729..67403 | - | 675 | WP_163078153.1 | TetR/AcrR family transcriptional regulator | - |
| G3A50_RS21860 () | 67749..68834 | + | 1086 | WP_163078156.1 | Multidrug resistance protein MdtE | VF |
| G3A50_RS21865 () | 68858..71992 | + | 3135 | WP_163078429.1 | Multidrug efflux pump subunit AcrB | VF |
| G3A50_RS21870 () | 72390..73259 | - | 870 | Protein_72 | IS110 family transposase ISAzs4 | Transposase |
| G3A50_RS21875 () | 73240..73518 | + | 279 | Protein_73 | ISL3 family transposase ISMex24 | Transposase |
| G3A50_RS21880 () | 73642..73911 | + | 270 | WP_163078159.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| G3A50_RS21885 () | 73908..74201 | + | 294 | WP_163078162.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G3A50_RS21890 () | 74390..74578 | + | 189 | WP_163078432.1 | hypothetical protein | - |
| G3A50_RS21895 () | 74892..75395 | + | 504 | WP_163078165.1 | RNA polymerase sigma factor CarQ | VF |
| G3A50_RS21900 () | 75506..76228 | + | 723 | WP_163078168.1 | FecR domain-containing protein | - |
| G3A50_RS21905 () | 76295..77161 | - | 867 | WP_163078170.1 | TniQ family protein | - |
| G3A50_RS21910 () | 77158..78039 | - | 882 | WP_163078172.1 | TniB family NTP-binding protein | - |
| G3A50_RS21915 () | 78052..79665 | - | 1614 | WP_163078175.1 | DDE-type integrase/transposase/recombinase | - |
| G3A50_RS21920 () | 79826..80794 | - | 969 | Protein_82 | IS21 family transposase IS1600 | Transposase |
| G3A50_RS21925 () | 80980..81774 | - | 795 | WP_163078178.1 | IS21 family transposase IS1600 | Transposase |
| G3A50_RS21930 () | 81764..83293 | - | 1530 | WP_163078435.1 | IS21 family transposase ISRsp3 | Transposase |
| G3A50_RS21935 () | 83554..84450 | + | 897 | WP_163078181.1 | 2,3-dimethylmalate lyase | VF |
| G3A50_RS21940 () | 84481..85743 | + | 1263 | WP_163078183.1 | 3-isopropylmalate dehydratase large subunit | - |
| G3A50_RS21945 () | 85740..86237 | + | 498 | WP_163078186.1 | 3-isopropylmalate dehydratase | - |
| G3A50_RS21950 () | 86531..86968 | - | 438 | WP_131837174.1 | Rrf2 family transcriptional regulator | - |
| G3A50_RS21955 () | 87118..87798 | + | 681 | WP_126281268.1 | class I SAM-dependent methyltransferase | - |
| G3A50_RS21960 () | 88052..89452 | - | 1401 | WP_163078189.1 | chromate efflux transporter | - |
| G3A50_RS21965 () | 89464..90282 | - | 819 | WP_163078191.1 | sulfurtransferase/chromate resistance protein | - |
| G3A50_RS21970 () | 90409..91134 | - | 726 | WP_163078194.1 | sulfite exporter TauE/SafE family protein | - |
| G3A50_RS21975 () | 91137..91574 | - | 438 | WP_163078196.1 | DedA family protein | - |
| G3A50_RS21980 () | 91600..92919 | - | 1320 | WP_163078199.1 | MFS transporter | - |
| G3A50_RS21985 () | 92923..94131 | - | 1209 | WP_163078202.1 | nickel/cobalt efflux transporter RcnA | - |
| G3A50_RS21990 () | 94139..94420 | - | 282 | WP_163078216.1 | metal-sensing transcriptional repressor | - |
| G3A50_RS21995 () | 94543..94935 | + | 393 | WP_163078219.1 | hypothetical protein | - |
| G3A50_RS22000 () | 94985..95719 | + | 735 | WP_163078222.1 | HupE/UreJ family protein | - |
| G3A50_RS22005 () | 95747..96379 | + | 633 | WP_163078225.1 | transmembrane anchor protein | - |
| G3A50_RS22010 () | 96692..97087 | - | 396 | WP_163078228.1 | hypothetical protein | - |
| G3A50_RS22020 () | 99013..99921 | + | 909 | WP_163078234.1 | DUF1738 domain-containing protein | - |
| G3A50_RS22025 () | 100150..100845 | + | 696 | WP_163078237.1 | outer membrane beta-barrel protein | - |
| G3A50_RS22030 () | 100836..101438 | - | 603 | WP_163078240.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| G3A50_RS22035 () | 101454..101852 | - | 399 | WP_163078438.1 | hypothetical protein | - |
| G3A50_RS22040 () | 102297..102650 | + | 354 | WP_163078243.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| G3A50_RS22045 () | 102847..103440 | - | 594 | WP_163078246.1 | pilus assembly protein | - |
| G3A50_RS22050 () | 103450..103986 | - | 537 | WP_163078441.1 | pilus assembly protein | - |
| G3A50_RS22055 () | 103991..104467 | - | 477 | WP_163078249.1 | pilus assembly protein N-terminal domain-containing protein | - |
| G3A50_RS22060 () | 104686..104889 | + | 204 | WP_126281622.1 | hypothetical protein | - |
| G3A50_RS22065 () | 104988..105191 | + | 204 | WP_163078253.1 | hypothetical protein | - |
| G3A50_RS22070 () | 105238..105762 | + | 525 | WP_163078256.1 | prepilin peptidase | - |
| G3A50_RS22075 () | 105813..106559 | + | 747 | WP_163078444.1 | Flp pilus assembly protein CpaB | - |
| G3A50_RS22080 () | 106576..108081 | + | 1506 | WP_163078259.1 | type II and III secretion system protein family protein | - |
| G3A50_RS22085 () | 108096..108833 | + | 738 | WP_163078261.1 | CpaD family pilus assembly lipoprotein | - |
| G3A50_RS22090 () | 108833..110137 | + | 1305 | WP_163078263.1 | Iron-sulfur cluster carrier protein | VF |
| G3A50_RS22095 () | 110146..111540 | + | 1395 | WP_163078265.1 | Putative conjugal transfer protein | VF |
| G3A50_RS22100 () | 111540..112532 | + | 993 | WP_163078268.1 | type II secretion system F family protein | - |
| G3A50_RS22105 () | 112529..113440 | + | 912 | WP_163078271.1 | type II secretion system F family protein | - |
| G3A50_RS22110 () | 113443..114366 | + | 924 | WP_163078275.1 | Tad domain-containing protein | - |
| G3A50_RS22115 () | 114410..115060 | + | 651 | WP_163078277.1 | tetratricopeptide repeat protein | - |
| G3A50_RS22120 () | 115158..115406 | + | 249 | WP_163078280.1 | hypothetical protein | - |
| G3A50_RS22125 () | 115462..118884 | - | 3423 | WP_163078283.1 | class I SAM-dependent DNA methyltransferase | - |
| G3A50_RS22130 () | 119235..121214 | + | 1980 | WP_163078286.1 | ParB/RepB/Spo0J family partition protein | - |
| G3A50_RS22135 () | 121269..121424 | + | 156 | WP_163078289.1 | hypothetical protein | - |
| G3A50_RS22145 () | 121801..122046 | + | 246 | WP_163078292.1 | hypothetical protein | - |
| G3A50_RS22150 () | 122757..123062 | + | 306 | WP_163078295.1 | hypothetical protein | - |
| G3A50_RS22155 () | 123059..123385 | + | 327 | WP_163078297.1 | hypothetical protein | - |
| G3A50_RS22160 () | 124084..124920 | + | 837 | WP_163078300.1 | methyltransferase | - |
| G3A50_RS22165 () | 124929..125261 | + | 333 | WP_163078303.1 | theronine dehydrogenase | - |
| G3A50_RS22170 () | 125641..126681 | + | 1041 | WP_163078305.1 | hypothetical protein | - |
| G3A50_RS22175 () | 126678..127022 | + | 345 | WP_163078308.1 | hypothetical protein | - |
| G3A50_RS22180 () | 127106..127444 | + | 339 | WP_163078311.1 | hypothetical protein | - |
| G3A50_RS22185 () | 127942..128301 | + | 360 | WP_163078314.1 | single-stranded DNA-binding protein | - |
| G3A50_RS22190 () | 128510..128740 | + | 231 | WP_163078317.1 | hypothetical protein | - |
| G3A50_RS22195 () | 129101..129412 | - | 312 | WP_126280787.1 | DUF982 domain-containing protein | - |
| G3A50_RS22200 () | 129496..129735 | + | 240 | WP_163078319.1 | hypothetical protein | - |
| G3A50_RS22205 () | 129787..129990 | + | 204 | WP_163078322.1 | hypothetical protein | - |
| G3A50_RS22210 () | 130048..130455 | - | 408 | WP_163078447.1 | hypothetical protein | - |
| G3A50_RS22215 () | 130556..131107 | - | 552 | WP_163078325.1 | hypothetical protein | - |
| G3A50_RS22220 () | 131110..133029 | - | 1920 | WP_170308676.1 | Protein VirD4 | VF |
| G3A50_RS22225 () | 133101..133346 | - | 246 | WP_163078331.1 | conjugal transfer protein TraD | - |
| G3A50_RS22230 () | 133387..133644 | - | 258 | WP_163078334.1 | pilus assembly protein | - |
| G3A50_RS22235 () | 133913..138445 | + | 4533 | WP_163078337.1 | Adenosine monophosphate-protein transferase VbhT | Relaxase |
| G3A50_RS22240 () | 138471..139181 | + | 711 | WP_126280792.1 | BID domain-containing protein | - |
| G3A50_RS22245 () | 139381..140387 | - | 1007 | Protein_146 | IS3 family transposase ISMlo4 | Transposase |
| G3A50_RS22250 () | 140432..141652 | - | 1221 | WP_163078340.1 | site-specific integrase | - |
| G3A50_RS22255 () | 141783..142019 | - | 237 | WP_163078343.1 | hypothetical protein | - |
| G3A50_RS22260 () | 142028..142552 | - | 525 | WP_163078346.1 | hypothetical protein | - |
| G3A50_RS22265 () | 142925..143485 | - | 561 | WP_163078349.1 | HNH endonuclease | - |
| G3A50_RS22270 () | 143617..143847 | - | 231 | WP_163078351.1 | hypothetical protein | - |
| G3A50_RS22275 () | 143844..145820 | - | 1977 | WP_163078354.1 | hypothetical protein | - |
| G3A50_RS22280 () | 145822..146130 | - | 309 | WP_163078356.1 | hypothetical protein | - |
| G3A50_RS22285 () | 146123..146677 | - | 555 | WP_163078359.1 | HK97 gp10 family phage protein | - |
| G3A50_RS22290 () | 146857..147387 | - | 531 | WP_163078450.1 | HK97 family phage prohead protease | - |
| G3A50_RS22295 () | 147414..148505 | - | 1092 | WP_163078362.1 | phage major capsid protein | - |
| G3A50_RS22300 () | 148566..148781 | - | 216 | WP_163078364.1 | hypothetical protein | - |
| G3A50_RS22305 () | 148784..149176 | - | 393 | WP_163078368.1 | hypothetical protein | - |
| G3A50_RS22310 () | 149296..150357 | - | 1062 | WP_163078371.1 | phage regulatory protein/antirepressor Ant | - |
| G3A50_RS22315 () | 150365..150628 | - | 264 | WP_163078374.1 | helix-turn-helix domain-containing protein | - |
| G3A50_RS22320 () | 150830..150970 | - | 141 | Protein_161 | IS3 family transposase ISXau2 | Transposase |
| G3A50_RS22325 () | 151554..152423 | + | 870 | WP_126280794.1 | nitrilase family protein | - |
| G3A50_RS22330 () | 152475..153632 | + | 1158 | WP_163078378.1 | substrate-binding protein | - |
| G3A50_RS22335 () | 153967..154803 | + | 837 | WP_163078381.1 | branched-chain amino acid ABC transporter permease | - |
| G3A50_RS22340 () | 154796..156625 | + | 1830 | WP_163078383.1 | ATP-binding cassette domain-containing protein | - |
| G3A50_RS22345 () | 156622..157320 | + | 699 | WP_163078386.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| G3A50_RS22350 () | 157330..158022 | + | 693 | WP_163078403.1 | Urease subunit alpha | VF |
| G3A50_RS22355 () | 158024..159739 | + | 1716 | WP_163078406.1 | Urease subunit alpha | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|