NZ_CP0483601..144585

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 144585 bp
Accession: NZ_CP048360        Location: 1..144585         Organism: Escherichia coli strain 53       Replicon: plasmid p53_A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GZS09_RS23360 () 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
GZS09_RS23365 () 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
GZS09_RS23370 () 2124..2312 - 189 WP_001309252.1 hypothetical protein -
GZS09_RS23375 () 2679..3848 + 1170 WP_001072358.1 hypothetical protein -
GZS09_RS23380 () 4074..4249 - 176 Protein_4 IS3 family transposase -
GZS09_RS23385 () 4695..4967 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
GZS09_RS23390 () 5492..5928 - 437 Protein_6 IS3 family transposase IS2 Transposase
GZS09_RS23395 () 6210..8180 + 1971 WP_001298664.1 Hemin receptor VF
GZS09_RS23400 () 8187..8978 + 792 WP_000977394.1 DUF4198 domain-containing protein -
GZS09_RS23405 () 9041..9649 - 609 Protein_9 IS66 family transposase ISEc22 Transposase
GZS09_RS23410 () 9717..10499 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
GZS09_RS23415 () 10496..11431 - 936 Protein_11 IS21 family transposase IS100kyp Transposase
GZS09_RS23420 () 11481..12185 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS23425 () 12250..13101 + 852 Protein_13 Tn3 family transposase TnpA_ISSba14 Transposase
GZS09_RS23430 () 13135..13239 + 105 Protein_14 IS5/IS1182 family transposase -
GZS09_RS23435 () 13389..14021 - 633 Protein_15 histidine-type phosphatase -
GZS09_RS23440 () 14143..14628 - 486 WP_000874189.1 hypothetical protein -
GZS09_RS23445 () 14653..15138 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
GZS09_RS23450 () 15125..15820 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
GZS09_RS23455 () 15825..16955 - 1131 WP_000729219.1 ABC transporter permease -
GZS09_RS23460 () 16945..18228 - 1284 WP_000964653.1 ABC transporter permease -
GZS09_RS23465 () 18231..19610 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
GZS09_RS23470 () 19714..20241 - 528 WP_000178050.1 iron transporter -
GZS09_RS23475 () 20282..22168 - 1887 WP_000118029.1 FTR1 family iron permease -
GZS09_RS23480 () 22515..23330 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
GZS09_RS23485 () 23513..24019 - 507 WP_000949452.1 protein disulfide oxidoreductase -
GZS09_RS23490 () 24009..24167 - 159 WP_000449408.1 DsbA family protein -
GZS09_RS23495 () 24317..25021 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS23500 () 25415..26581 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
GZS09_RS23505 () 26581..27552 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
GZS09_RS23510 () 28290..29192 + 903 WP_064766247.1 DUF1281 domain-containing protein -
GZS09_RS23515 () 29196..29500 + 305 Protein_31 hypothetical protein -
GZS09_RS23520 () 29577..30260 + 684 WP_040110341.1 DNA methylase -
GZS09_RS23525 () 30261..30482 + 222 WP_001104873.1 hypothetical protein -
GZS09_RS23530 () 30496..30930 + 435 WP_001546462.1 DUF1380 family protein -
GZS09_RS23535 () 30975..31745 + 771 WP_001006251.1 hypothetical protein -
GZS09_RS23550 () 32282..32584 + 303 WP_001666994.1 antirestriction protein -
GZS09_RS23555 () 32631..33053 + 423 WP_000271685.1 DUF1380 family protein -
GZS09_RS23560 () 33050..33241 + 192 WP_001027495.1 hypothetical protein -
GZS09_RS23565 () 33513..33761 - 249 WP_071781657.1 hypothetical protein -
GZS09_RS23570 () 34273..34503 + 231 WP_000218642.1 hypothetical protein -
GZS09_RS23575 () 34555..35916 + 1362 WP_000199439.1 DUF3560 domain-containing protein -
GZS09_RS23580 () 35964..36529 + 566 Protein_42 class I SAM-dependent methyltransferase -
GZS09_RS23585 () 36555..36773 + 219 WP_001496291.1 hypothetical protein -
GZS09_RS25690 () 37183..37389 + 207 WP_000275856.1 hypothetical protein -
GZS09_RS23595 () 37415..37954 + 540 WP_000290840.1 single-stranded DNA-binding protein -
GZS09_RS23600 () 38022..38255 + 234 WP_000005990.1 DUF905 family protein -
GZS09_RS23605 () 38283..38480 + 198 Protein_47 hypothetical protein -
GZS09_RS23610 () 38535..38969 + 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
GZS09_RS23615 () 38966..39685 + 720 WP_001276238.1 plasmid SOS inhibition protein A -
GZS09_RS23620 () 39697..39885 - 189 WP_001299721.1 hypothetical protein -
- () 39697..39921 + 225 NuclAT_0 - -
- () 39697..39921 + 225 NuclAT_0 - -
- () 39697..39921 + 225 NuclAT_0 - -
- () 39697..39921 + 225 NuclAT_0 - -
GZS09_RS23625 () 39965..40123 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
GZS09_RS23635 () 41044..41331 + 288 WP_000107535.1 hypothetical protein -
GZS09_RS23640 () 41450..42271 + 822 WP_001234426.1 DUF945 domain-containing protein -
GZS09_RS23645 () 42568..43170 - 603 WP_013362798.1 hypothetical protein VF
GZS09_RS23650 () 43491..43874 + 384 WP_001151524.1 relaxosome protein TraM -
GZS09_RS23655 () 44061..44750 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
GZS09_RS23660 () 44849..45244 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
GZS09_RS23665 () 45277..45642 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
GZS09_RS23670 () 45657..45968 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
GZS09_RS23675 () 45990..46556 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
GZS09_RS23680 () 46567..47271 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
GZS09_RS23685 () 47271..48698 + 1428 WP_000146685.1 conjugal transfer protein TraB -
GZS09_RS23690 () 48688..49278 + 591 WP_000002787.1 conjugal transfer protein TraP -
GZS09_RS23695 () 49232..49462 + 231 WP_001352845.1 conjugal transfer protein TrbD -
GZS09_RS23700 () 49474..49725 + 252 WP_001038342.1 conjugal transfer protein TrbG -
GZS09_RS23705 () 49722..50237 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
GZS09_RS23710 () 50372..50593 + 222 WP_001278689.1 conjugal transfer protein TraR -
GZS09_RS23715 () 50753..53380 + 2628 WP_001064245.1 type IV secretion system protein TraC -
GZS09_RS23720 () 53377..53763 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
GZS09_RS23725 () 53760..54392 + 633 WP_001203726.1 type-F conjugative transfer system protein TraW -
GZS09_RS23730 () 54389..55381 + 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
GZS09_RS23735 () 55390..56028 + 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
GZS09_RS23740 () 56025..57833 + 1809 WP_162647495.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
GZS09_RS23745 () 57860..58117 + 258 WP_000864312.1 conjugal transfer protein TrbE -
GZS09_RS23750 () 58110..58853 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
GZS09_RS23755 () 58867..59208 + 342 WP_000556794.1 conjugal transfer protein TrbA -
GZS09_RS23760 () 59189..59524 - 336 WP_000415571.1 hypothetical protein -
GZS09_RS23765 () 59605..59889 + 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
GZS09_RS23770 () 59876..60430 + 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
GZS09_RS23775 () 60360..60734 + 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
GZS09_RS23780 () 60688..61080 + 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
GZS09_RS23785 () 61067..62440 + 1374 WP_021518370.1 conjugal transfer protein TraH -
GZS09_RS23790 () 62437..65262 + 2826 WP_162647496.1 conjugal transfer mating pair stabilization protein TraG -
GZS09_RS23795 () 65259..65768 + 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
GZS09_RS23800 () 65782..66513 + 732 WP_000850424.1 complement resistance protein TraT -
GZS09_RS23805 () 66765..68972 + 2208 WP_048257129.1 type IV conjugative transfer system coupling protein TraD -
GZS09_RS23810 () 68972..74092 + 5121 WP_013362805.1 Multifunctional conjugation protein TraI Relaxase
GZS09_RS23815 () 74112..74858 + 747 WP_162647497.1 conjugal transfer pilus acetylase TraX -
GZS09_RS23820 () 74913..75473 + 561 WP_000139363.1 fertility inhibition protein FinO -
GZS09_RS23825 () 75607..75819 + 213 WP_005012601.1 hypothetical protein -
GZS09_RS25695 () 76120..76209 - 90 Protein_91 IS1 family transposase -
GZS09_RS23835 () 76264..76941 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
GZS09_RS23840 () 76941..77288 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
GZS09_RS23845 () 77308..78879 + 1572 WP_023149734.1 IS66 family transposase ISCro1 Transposase
GZS09_RS23850 () 78917..79533 - 617 Protein_95 IS1 family transposase IS1S Transposase
GZS09_RS23855 () 79634..79816 + 183 WP_000968309.1 hypothetical protein -
- () 79955..80016 - 62 NuclAT_1 - Antitoxin Detail
- () 79955..80016 - 62 NuclAT_1 - Antitoxin Detail
- () 79955..80016 - 62 NuclAT_1 - Antitoxin Detail
- () 79955..80016 - 62 NuclAT_1 - Antitoxin Detail
GZS09_RS23860 () 80003..80209 + 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
GZS09_RS23865 () 80493..80750 + 258 WP_000083833.1 replication regulatory protein RepA -
GZS09_RS23870 () 80986..81060 + 75 WP_032336874.1 RepA leader peptide Tap -
GZS09_RS23875 () 81053..81499 + 447 Protein_100 incFII family plasmid replication initiator RepA -
GZS09_RS23880 () 81445..81927 - 483 Protein_101 VENN motif pre-toxin domain-containing protein -
GZS09_RS23885 () 82820..84040 + 1221 WP_000410951.1 arginine deiminase -
GZS09_RS23890 () 84051..84962 + 912 WP_000440183.1 carbamate kinase -
GZS09_RS23895 () 85047..86051 + 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
GZS09_RS23900 () 86099..87502 + 1404 WP_000514417.1 YfcC family protein -
GZS09_RS23905 () 87583..88062 + 480 WP_001496175.1 ArgR family transcriptional regulator -
GZS09_RS23910 () 88126..88467 - 342 Protein_107 transposase -
GZS09_RS23915 () 88419..88640 - 222 WP_000080227.1 hypothetical protein -
GZS09_RS23920 () 88671..89021 - 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
GZS09_RS23925 () 89018..89380 - 363 WP_059330006.1 IS66 family insertion sequence hypothetical protein -
GZS09_RS23930 () 89489..90186 - 698 Protein_111 IS1 family transposase IS1S Transposase
GZS09_RS23935 () 90219..90797 + 579 WP_032152936.1 DUF2726 domain-containing protein -
GZS09_RS23940 () 91210..91563 - 354 WP_000005489.1 hypothetical protein -
GZS09_RS23945 () 92035..93057 - 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
GZS09_RS23950 () 93462..93719 + 258 WP_000083821.1 replication regulatory protein RepA -
GZS09_RS23955 () 93954..94028 + 75 WP_032336874.1 RepA leader peptide Tap -
GZS09_RS23960 () 94021..94878 + 858 WP_000130937.1 incFII family plasmid replication initiator RepA -
GZS09_RS25700 () 95579..95719 + 141 WP_001333237.1 hypothetical protein -
GZS09_RS23965 () 95817..96470 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
GZS09_RS23970 () 96563..96820 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
GZS09_RS23975 () 96753..97154 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
GZS09_RS23980 () 97403..97818 + 416 Protein_122 IS1 family transposase -
GZS09_RS23985 () 97854..98399 - 546 Protein_123 Tn3 family transposase TnpA_Tn3 Transposase
GZS09_RS23990 () 98465..99169 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS23995 () 99233..99424 + 192 Protein_125 transposase -
GZS09_RS24005 () 99674..100549 + 876 WP_032277257.1 Beta-lactamase CTX-M-97 ARG
GZS09_RS24010 () 100584..101552 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
GZS09_RS24015 () 101609..102706 + 1098 Protein_128 TonB-dependent receptor -
GZS09_RS24020 () 102774..103163 - 390 Protein_129 Tn3 family transposase TnpA_Tn3 Transposase
GZS09_RS24025 () 103327..103458 + 132 Protein_130 recombinase family protein -
GZS09_RS24030 () 103522..104226 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS24035 () 104279..104785 + 507 Protein_132 transposase -
GZS09_RS24040 () 104794..105654 + 861 WP_000493383.1 EamA family transporter -
GZS09_RS24045 () 105686..106885 - 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
GZS09_RS24050 () 106991..107617 + 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
GZS09_RS24055 () 107649..107885 - 237 WP_042005022.1 hypothetical protein -
GZS09_RS24060 () 107939..108775 - 837 WP_000480972.1 hypothetical protein ARG
GZS09_RS24065 () 108775..109578 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
GZS09_RS24070 () 109639..110454 - 816 WP_135116982.1 Dihydropteroate synthase ARG
GZS09_RS24080 () 110762..110938 - 177 Protein_140 replication protein C -
GZS09_RS24085 () 110999..111703 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS24090 () 111825..112730 + 906 WP_000219391.1 hypothetical protein ARG
GZS09_RS24095 () 112727..113965 + 1239 WP_000004159.1 MFS transporter -
GZS09_RS24100 () 113965..114549 + 585 WP_001137892.1 TetR family transcriptional regulator -
GZS09_RS24105 () 115042..115806 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
GZS09_RS24110 () 115924..115989 - 66 Protein_146 EAL domain-containing protein -
GZS09_RS24115 () 116033..116338 - 306 WP_000130000.1 hypothetical protein Relaxase
GZS09_RS24120 () 116349..117554 - 1206 WP_000184001.1 chromate efflux transporter -
GZS09_RS24125 () 117710..117913 - 204 WP_000376616.1 hypothetical protein -
GZS09_RS24130 () 118041..118880 - 840 WP_000259031.1 Dihydropteroate synthase ARG
GZS09_RS24135 () 118874..119209 - 336 WP_052238321.1 ethidium bromide resistance protein -
GZS09_RS24140 () 119102..119467 + 366 WP_025999322.1 hydrogenase maturation nickel metallochaperone HypA -
GZS09_RS24145 () 119471..120346 - 876 WP_004193231.1 LysR family transcriptional regulator AmpR -
GZS09_RS24150 () 120457..121596 + 1140 WP_004236386.1 Beta-lactamase ARG
GZS09_RS24155 () 121791..122585 + 795 Protein_155 alpha-2-macroglobulin family protein -
GZS09_RS24160 () 122588..122758 + 171 Protein_156 LacI family transcriptional regulator -
GZS09_RS24165 () 122947..123177 - 231 WP_004193241.1 phage shock protein PspD -
GZS09_RS24170 () 123186..123545 - 360 WP_004193243.1 envelope stress response membrane protein PspC -
GZS09_RS24175 () 123545..123769 - 225 WP_004193245.1 envelope stress response membrane protein PspB -
GZS09_RS24180 () 123824..124492 - 669 WP_003020532.1 phage shock protein PspA -
GZS09_RS24185 () 124663..125637 + 975 WP_004193248.1 Psp operon transcriptional activator VF
GZS09_RS24190 () 125720..126364 + 645 WP_017900990.1 Pentapeptide repeat protein ARG
GZS09_RS24195 () 126460..126714 - 255 Protein_163 SDR family oxidoreductase -
GZS09_RS24200 () 126769..127473 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS24205 () 127541..127867 - 327 Protein_165 nucleotidyltransferase domain-containing protein -
GZS09_RS24210 () 127998..128471 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
GZS09_RS24215 () 128629..129378 + 750 Protein_167 IS91 family transposase ISAzo26 Transposase
GZS09_RS24220 () 129437..130141 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GZS09_RS24225 () 130459..131214 - 756 WP_000852146.1 replication initiation protein RepE -
GZS09_RS24230 () 131936..132742 - 807 WP_000016970.1 site-specific integrase -
GZS09_RS24235 () 132743..133048 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
GZS09_RS24240 () 133050..133268 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
GZS09_RS24245 () 133828..134058 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
GZS09_RS24250 () 134055..134471 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
GZS09_RS24255 () 134546..136111 + 1566 WP_001128474.1 AAA family ATPase -
GZS09_RS24260 () 136096..137118 + 1023 WP_000361402.1 helicase UvrD -
GZS09_RS24265 () 137372..138058 - 687 Protein_177 IS1 family transposase IS1S Transposase
GZS09_RS24270 () 138169..139026 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
GZS09_RS24275 () 139023..139880 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
GZS09_RS24280 () 139877..140704 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
GZS09_RS24285 () 140704..141618 - 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
GZS09_RS24290 () 141974..142660 + 687 Protein_182 IS1 family transposase IS1S Transposase
GZS09_RS24295 () 142840..143353 - 514 Protein_183 DUF4113 domain-containing protein -
GZS09_RS25705 () 143414..143518 - 105 Protein_184 AAA family ATPase -
GZS09_RS24300 () 143520..143843 - 324 Protein_185 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance