MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 76937 bp
Accession: NZ_CP048011 Location: 1..76937 Organism: Escherichia coli strain RUT3575 Replicon: plasmid p3575-CTX-M
Accession: NZ_CP048011 Location: 1..76937 Organism: Escherichia coli strain RUT3575 Replicon: plasmid p3575-CTX-M
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GW576_RS23090 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| GW576_RS23095 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| GW576_RS23100 () | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| GW576_RS23105 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| GW576_RS23110 () | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| GW576_RS23115 () | 4651..4779 | + | 129 | Protein_5 | IS481 family transposase | - |
| GW576_RS23120 () | 4814..5008 | - | 195 | WP_086258557.1 | hypothetical protein | - |
| GW576_RS23125 () | 5050..5747 | + | 698 | Protein_7 | IS1 family transposase | - |
| GW576_RS23130 () | 5763..5882 | + | 120 | Protein_8 | ArsR family transcriptional regulator | - |
| GW576_RS23135 () | 5860..6483 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| GW576_RS23140 () | 6565..7770 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| GW576_RS23145 () | 7883..8476 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| GW576_RS23150 () | 8610..9314 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23155 () | 9368..9733 | - | 366 | Protein_13 | chromate transporter | - |
| GW576_RS23160 () | 9889..10092 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| GW576_RS23165 () | 10220..11059 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GW576_RS23170 () | 11053..11400 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GW576_RS23175 () | 11606..12394 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GW576_RS23180 () | 12525..12998 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| GW576_RS23185 () | 13156..14169 | + | 1014 | WP_156650796.1 | IS91 family transposase ISAzo26 | Transposase |
| GW576_RS23190 () | 14372..14518 | + | 147 | Protein_20 | EAL domain-containing protein | - |
| GW576_RS23195 () | 14571..15273 | - | 703 | Protein_21 | IS6-like element IS26 family transposase | - |
| GW576_RS23200 () | 15432..15713 | - | 282 | Protein_22 | IS91 family transposase ISPps1 | Transposase |
| GW576_RS23205 () | 15860..16719 | - | 860 | Protein_23 | Beta-lactamase TEM-12 | ARG |
| GW576_RS23210 () | 16902..17241 | - | 340 | Protein_24 | recombinase family protein | - |
| GW576_RS23215 () | 17305..18009 | + | 705 | WP_196315549.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23220 () | 18391..19266 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| GW576_RS23225 () | 19313..19645 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| GW576_RS23230 () | 19659..21897 | + | 2239 | Protein_28 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GW576_RS23235 () | 21962..22666 | + | 705 | WP_196315549.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23240 () | 22720..23160 | - | 441 | Protein_30 | CatB-related O-acetyltransferase | - |
| GW576_RS23245 () | 23298..24128 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| GW576_RS23250 () | 24259..24813 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| GW576_RS23255 () | 24957..25661 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GW576_RS23260 () | 25724..28069 | + | 2346 | Protein_34 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| GW576_RS23265 () | 28206..28607 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GW576_RS23270 () | 28540..28797 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GW576_RS23275 () | 28890..29543 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| GW576_RS23280 () | 30483..31340 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| GW576_RS23285 () | 31333..31407 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| GW576_RS23290 () | 31404..31538 | - | 135 | Protein_40 | protein CopA/IncA | - |
| GW576_RS23295 () | 31769..33310 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| GW576_RS23300 () | 33325..34071 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| GW576_RS23305 () | 34231..34485 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| GW576_RS23310 () | 34782..34916 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 34961..35021 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34961..35021 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34961..35021 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 34961..35021 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| GW576_RS23315 () | 34988..35274 | - | 287 | Protein_45 | DUF2726 domain-containing protein | - |
| GW576_RS23320 () | 35787..35999 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| GW576_RS23325 () | 36130..36690 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| GW576_RS23330 () | 36745..37491 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| GW576_RS23335 () | 37511..39904 | - | 2394 | Protein_49 | Multifunctional conjugation protein TraI | Relaxase |
| GW576_RS23340 () | 39874..40956 | - | 1083 | WP_060621339.1 | DUF3560 domain-containing protein | - |
| GW576_RS23345 () | 41008..41238 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| GW576_RS23350 () | 42635..44302 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| GW576_RS23355 () | 44616..44807 | - | 192 | WP_039021874.1 | hypothetical protein | - |
| GW576_RS23360 () | 44804..45226 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| GW576_RS23365 () | 45273..45575 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| GW576_RS23370 () | 46115..46891 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| GW576_RS23375 () | 46942..47376 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| GW576_RS23380 () | 47390..47611 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| GW576_RS23385 () | 47612..48295 | - | 684 | WP_000086185.1 | DNA methylase | - |
| GW576_RS23390 () | 48372..48676 | - | 305 | Protein_60 | hypothetical protein | - |
| GW576_RS23395 () | 48680..49582 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| GW576_RS23400 () | 50449..51420 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GW576_RS23405 () | 51420..52586 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GW576_RS23410 () | 53174..53929 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| GW576_RS23415 () | 54703..55509 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| GW576_RS23420 () | 55510..55815 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GW576_RS23425 () | 55817..56035 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GW576_RS23430 () | 56669..56866 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| GW576_RS23435 () | 56863..57147 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| GW576_RS23440 () | 57167..58300 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| GW576_RS23445 () | 58563..61682 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| GW576_RS23450 () | 61989..62219 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GW576_RS23455 () | 62216..62632 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GW576_RS23460 () | 62794..64932 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| GW576_RS23465 () | 65397..66392 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| GW576_RS23470 () | 66396..67328 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| GW576_RS23475 () | 67465..68162 | - | 698 | Protein_77 | IS1 family transposase IS1R | Transposase |
| GW576_RS23480 () | 68376..71492 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| GW576_RS23485 () | 71614..72897 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| GW576_RS23490 () | 72894..74450 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| GW576_RS23495 () | 74633..74854 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GW576_RS23500 () | 74854..75234 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| GW576_RS23505 () | 75239..75418 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| GW576_RS23510 () | 75446..75805 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| GW576_RS23515 () | 75729..76142 | + | 414 | Protein_85 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|