MGE detailed information
MGE type: Prophage MGE length: 54526 bp
Accession: NZ_CP047553 Location: 2819492..2874017 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10231 Replicon: chromosome
Accession: NZ_CP047553 Location: 2819492..2874017 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10231 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN27_RS13740 () | 2815221..2815679 | + | 459 | WP_000156280.1 | DUF986 family protein | - |
| DXN27_RS13745 () | 2816089..2816655 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| DXN27_RS13750 () | 2816652..2817461 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DXN27_RS13755 () | 2817527..2819272 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| DXN27_RS13760 () | 2819492..2819701 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DXN27_RS13765 () | 2819714..2819857 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| DXN27_RS13770 () | 2820506..2820793 | - | 288 | WP_001000660.1 | YebO family protein | - |
| DXN27_RS13775 () | 2820864..2821007 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| DXN27_RS13780 () | 2821165..2821404 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| DXN27_RS13785 () | 2821616..2822407 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| DXN27_RS13790 () | 2822583..2823956 | + | 1374 | WP_000416128.1 | MFS transporter | - |
| DXN27_RS13795 () | 2824004..2824885 | - | 882 | WP_000984498.1 | protease HtpX | - |
| DXN27_RS13800 () | 2825079..2827127 | - | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN27_RS13805 () | 2827147..2827833 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN27_RS13810 () | 2827931..2828428 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN27_RS13815 () | 2828557..2829840 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN27_RS13820 () | 2829809..2832442 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN27_RS13825 () | 2832520..2833959 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN27_RS13830 () | 2834077..2834313 | + | 237 | WP_024131108.1 | YebV family protein | - |
| DXN27_RS13835 () | 2834424..2834615 | + | 192 | WP_000457836.1 | YebW family protein | - |
| DXN27_RS13840 () | 2834634..2835284 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN27_RS13845 () | 2835508..2835672 | - | 165 | WP_001134856.1 | membrane protein | - |
| DXN27_RS13850 () | 2835957..2836679 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| DXN27_RS13855 () | 2837362..2837757 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN27_RS13860 () | 2838087..2838563 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN27_RS13865 () | 2838951..2839370 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN27_RS13870 () | 2839740..2840009 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN27_RS13875 () | 2840175..2840315 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN27_RS13880 () | 2840461..2841655 | - | 1195 | Protein_2696 | IS256 family transposase IS285 | Transposase |
| DXN27_RS13885 () | 2841725..2842147 | + | 423 | Protein_2697 | hypothetical protein ; Integrase | Integrase |
| DXN27_RS13890 () | 2843460..2844374 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN27_RS13895 () | 2844507..2844665 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN27_RS13900 () | 2844675..2845289 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN27_RS13905 () | 2845616..2845783 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN27_RS25595 () | 2845777..2845923 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN27_RS13910 () | 2846437..2846562 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN27_RS13915 () | 2846562..2846742 | + | 181 | Protein_2704 | IS3 family transposase | - |
| DXN27_RS13920 () | 2847132..2847332 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN27_RS13925 () | 2847429..2847899 | - | 471 | Protein_2706 | tail fiber assembly protein | - |
| DXN27_RS13930 () | 2847909..2848253 | - | 345 | Protein_2707 | macro domain-containing protein | - |
| DXN27_RS13935 () | 2848468..2848728 | - | 261 | Protein_2708 | DUF1441 family protein | - |
| DXN27_RS13940 () | 2848783..2848971 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN27_RS13945 () | 2849036..2849203 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN27_RS13950 () | 2849460..2849993 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN27_RS13955 () | 2850047..2850238 | - | 192 | Protein_2712 | glycoside hydrolase family 19 protein | - |
| DXN27_RS13960 () | 2850227..2850688 | + | 462 | Protein_2713 | DNA breaking-rejoining protein | - |
| DXN27_RS13965 () | 2850952..2851875 | + | 924 | Protein_2714 | hypothetical protein ; Integrase | Integrase |
| - | 2852004..2852149 | + | 146 | - | - | Antitoxin Detail |
| - | 2852006..2852109 | - | 104 | - | - | Toxin Detail |
| DXN27_RS13970 () | 2852249..2852602 | - | 354 | WP_000722368.1 | YebY family protein | - |
| DXN27_RS13975 () | 2852619..2853494 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN27_RS13980 () | 2853495..2853869 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN27_RS13985 () | 2854007..2854237 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN27_RS13990 () | 2854345..2855001 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN27_RS13995 () | 2855025..2855723 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN27_RS14000 () | 2855758..2857809 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN27_RS14005 () | 2858022..2858681 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN27_RS14010 () | 2858775..2859128 | - | 354 | WP_001042119.1 | protein YebF | - |
| DXN27_RS14015 () | 2859196..2859486 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN27_RS14020 () | 2859617..2860795 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN27_RS14025 () | 2860895..2861536 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN27_RS14030 () | 2861574..2863385 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| DXN27_RS14035 () | 2863620..2865095 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| DXN27_RS14040 () | 2865437..2866306 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| DXN27_RS14045 () | 2866430..2867872 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| DXN27_RS14050 () | 2867945..2868916 | - | 972 | WP_000448401.1 | hypothetical protein | VF |
| DXN27_RS14055 () | 2869033..2870352 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| DXN27_RS14060 () | 2870368..2871312 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DXN27_RS14065 () | 2871391..2872146 | + | 756 | WP_000203014.1 | hypothetical protein | VF |
| DXN27_RS14070 () | 2872143..2872928 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| DXN27_RS14075 () | 2873007..2874017 | - | 1011 | WP_000568508.1 | hypothetical protein | VF |
| DXN27_RS14080 () | 2874026..2874637 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| DXN27_RS14085 () | 2875057..2875953 | + | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| DXN27_RS14090 () | 2876580..2877179 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| DXN27_RS14095 () | 2877181..2877702 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DXN27_RS14100 () | 2877739..2878479 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DXN27_RS14105 () | 2878509..2878961 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.009 |