MGE detailed information
MGE type: Prophage MGE length: 11549 bp
Accession: NZ_CP047548 Location: 4668176..4679724 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10169 Replicon: chromosome
Accession: NZ_CP047548 Location: 4668176..4679724 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10169 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN26_RS22940 (4663832) | 4663832..4664803 | + | 972 | WP_001038948.1 | DMT family transporter | - |
| DXN26_RS22945 (4664800) | 4664800..4665834 | + | 1035 | WP_000675710.1 | phosphotriesterase | - |
| DXN26_RS22950 (4665879) | 4665879..4667621 | - | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| DXN26_RS22955 (4667747) | 4667747..4668163 | + | 417 | WP_000826041.1 | DUF2756 family protein | - |
| DXN26_RS22960 (4668176) | 4668176..4668916 | - | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| DXN26_RS22965 (4668913) | 4668913..4669983 | - | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| DXN26_RS22970 (4669985) | 4669985..4670830 | - | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| DXN26_RS22975 (4670827) | 4670827..4671714 | - | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| DXN26_RS22980 (4671778) | 4671778..4673094 | - | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| DXN26_RS22985 (4673353) | 4673353..4673721 | - | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DXN26_RS22990 (4673718) | 4673718..4673939 | - | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN26_RS22995 (4674071) | 4674071..4674784 | - | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| DXN26_RS23000 (4674786) | 4674786..4675553 | - | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| DXN26_RS23005 (4675550) | 4675550..4676827 | - | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| DXN26_RS23010 (4676824) | 4676824..4677750 | - | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| DXN26_RS23015 (4677810) | 4677810..4678919 | - | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| DXN26_RS23020 (4679341) | 4679341..4679724 | + | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| DXN26_RS23025 (4679702) | 4679702..4679836 | + | 135 | WP_001517957.1 | hypothetical protein | - |
| DXN26_RS23030 (4679919) | 4679919..4681022 | - | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| DXN26_RS23035 (4681344) | 4681344..4682198 | - | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| DXN26_RS23040 (4682444) | 4682444..4683499 | - | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| DXN26_RS23045 (4683492) | 4683492..4684160 | - | 669 | WP_000617729.1 | cell division ATP-binding protein FtsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.008 |