MGE detailed information
MGE type: Prophage MGE length: 7378 bp
Accession: NZ_CP047546 Location: 315005..322382 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Accession: NZ_CP047546 Location: 315005..322382 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN28_RS01405 (310722) | 310722..310856 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| DXN28_RS01410 (310834) | 310834..311217 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| DXN28_RS01415 (311639) | 311639..312748 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| DXN28_RS01420 (312808) | 312808..313734 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| DXN28_RS01425 (313731) | 313731..315008 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| DXN28_RS01430 (315005) | 315005..315772 | + | 768 | WP_000082083.1 | 50S ribosomal protein L14 | VF |
| DXN28_RS01435 (315774) | 315774..316487 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| DXN28_RS01440 (316619) | 316619..316840 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN28_RS01445 (316837) | 316837..317205 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DXN28_RS01450 (317464) | 317464..318780 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| DXN28_RS01455 (318844) | 318844..319731 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| DXN28_RS01460 (319728) | 319728..320573 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| DXN28_RS01465 (320575) | 320575..321645 | + | 1071 | WP_000907838.1 | 30S ribosomal protein S5 | VF |
| DXN28_RS01470 (321642) | 321642..322382 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| DXN28_RS01475 (322395) | 322395..322811 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| DXN28_RS01480 (322937) | 322937..324679 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| DXN28_RS01485 (324724) | 324724..325758 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| DXN28_RS01490 (325755) | 325755..326726 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.004 |