MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP047542 Location: 3971041..3971217 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Accession: NZ_CP047542 Location: 3971041..3971217 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN30_RS19505 (3966104) | 3966104..3966754 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| DXN30_RS19510 (3967211) | 3967211..3967654 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| DXN30_RS19515 (3968085) | 3968085..3968534 | + | 450 | WP_000381610.1 | membrane protein | - |
| DXN30_RS19520 (3968519) | 3968519..3968866 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN30_RS19525 (3969139) | 3969139..3969465 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN30_RS19530 (3969706) | 3969706..3969884 | + | 179 | Protein_3802 | IS3 family transposase | - |
| DXN30_RS19535 (3970154) | 3970154..3970444 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN30_RS19540 (3970441) | 3970441..3970968 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN30_RS19545 (3971041) | 3971041..3971246 | - | 206 | Protein_3805 | IS5 family transposase ISEcl3 | Transposase |
| DXN30_RS19550 (3971593) | 3971593..3972249 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN30_RS19555 (3972421) | 3972421..3972942 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN30_RS19560 (3973101) | 3973101..3975668 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN30_RS19565 (3975724) | 3975724..3976104 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |