MGE detailed information
MGE type: Genomic_island MGE length: 10581 bp
Accession: NZ_CP047537 Location: 4026907..4037487 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Accession: NZ_CP047537 Location: 4026907..4037487 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN32_RS19735 (4022847) | 4022847..4023302 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| DXN32_RS19740 (4023444) | 4023444..4024673 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| DXN32_RS19745 (4024704) | 4024704..4024976 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| DXN32_RS19750 (4025098) | 4025098..4025952 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| DXN32_RS19755 (4026162) | 4026162..4026920 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| DXN32_RS19760 (4026907) | 4026907..4027419 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| DXN32_RS19765 (4027563) | 4027563..4028639 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| DXN32_RS19770 (4028636) | 4028636..4029379 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| DXN32_RS19775 (4029420) | 4029420..4031909 | - | 2490 | WP_000705483.1 | hypothetical protein | VF |
| DXN32_RS19780 (4032029) | 4032029..4032613 | - | 585 | WP_001244638.1 | hypothetical protein | VF |
| DXN32_RS19785 (4033332) | 4033332..4033964 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| DXN32_RS19790 (4034011) | 4034011..4034547 | - | 537 | WP_001038506.1 | hypothetical protein | VF |
| DXN32_RS19795 (4035353) | 4035353..4035751 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DXN32_RS19800 (4035751) | 4035751..4035978 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| DXN32_RS19805 (4036155) | 4036155..4036406 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| DXN32_RS19810 (4036681) | 4036681..4037487 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| DXN32_RS19820 (4037772) | 4037772..4038530 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| DXN32_RS19825 (4038795) | 4038795..4039340 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| DXN32_RS19830 (4039416) | 4039416..4040933 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.002 |