MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP047537 Location: 1231579..1245867 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Accession: NZ_CP047537 Location: 1231579..1245867 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN32_RS05735 () | 1226603..1227049 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| DXN32_RS05740 () | 1227068..1231162 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| DXN32_RS05745 () | 1231156..1231419 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| DXN32_RS05750 () | 1231483..1232352 | + | 870 | Protein_1106 | Protein RhsC | VF |
| DXN32_RS05755 () | 1232346..1232792 | + | 447 | WP_000935097.1 | protein SciX | - |
| DXN32_RS05760 () | 1233355..1233792 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| DXN32_RS05765 () | 1233845..1234120 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1233855..1234277 | + | 423 | - | - | Antitoxin Detail |
| DXN32_RS05770 () | 1234362..1234478 | + | 117 | WP_227457392.1 | hypothetical protein | - |
| DXN32_RS05775 () | 1234561..1234869 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| DXN32_RS05780 () | 1234971..1235219 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| DXN32_RS05785 () | 1235272..1235976 | + | 705 | Protein_1113 | integrase core domain-containing protein | - |
| DXN32_RS05790 () | 1236726..1237238 | + | 513 | WP_077248260.1 | pilus assembly protein | - |
| DXN32_RS05795 () | 1237322..1238059 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| DXN32_RS05800 () | 1238083..1240593 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| DXN32_RS05805 () | 1240615..1241085 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| DXN32_RS05810 () | 1241491..1242312 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| DXN32_RS05815 () | 1242395..1242635 | + | 241 | Protein_1119 | PerC family transcriptional regulator | - |
| DXN32_RS05820 () | 1243127..1244074 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| DXN32_RS05825 () | 1244191..1244406 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| DXN32_RS05830 () | 1244410..1245129 | - | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| DXN32_RS05835 () | 1245460..1245867 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| DXN32_RS05840 () | 1246238..1247005 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| DXN32_RS05845 () | 1247114..1249558 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| DXN32_RS05850 () | 1249798..1250376 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |