MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP047535 Location: 3536750..3550723 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10452 Replicon: chromosome
Accession: NZ_CP047535 Location: 3536750..3550723 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10452 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN08_RS17610 () | 3532321..3534765 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| DXN08_RS17615 () | 3534874..3535641 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| DXN08_RS17620 () | 3536012..3536419 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| DXN08_RS17625 () | 3536750..3537469 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| DXN08_RS17630 () | 3537473..3537688 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| DXN08_RS17635 () | 3537805..3538752 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| DXN08_RS17640 () | 3539244..3539484 | - | 241 | Protein_3452 | PerC family transcriptional regulator | - |
| DXN08_RS17645 () | 3539567..3540388 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| DXN08_RS17650 () | 3540794..3541264 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| DXN08_RS17655 () | 3541286..3543796 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| DXN08_RS17660 () | 3543820..3544557 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| DXN08_RS17665 () | 3544641..3545153 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| DXN08_RS17670 () | 3545903..3546607 | - | 705 | Protein_3458 | integrase core domain-containing protein | - |
| DXN08_RS17675 () | 3546660..3546908 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| DXN08_RS17680 () | 3547010..3547318 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| DXN08_RS17685 () | 3547401..3547574 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3547602..3548024 | - | 423 | - | - | Antitoxin Detail |
| DXN08_RS17690 () | 3547759..3548034 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| DXN08_RS17695 () | 3548087..3548524 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| DXN08_RS17700 () | 3549087..3549533 | - | 447 | WP_000935097.1 | protein SciX | - |
| DXN08_RS17705 () | 3549527..3550396 | - | 870 | Protein_3465 | Protein RhsC | VF |
| DXN08_RS17710 () | 3550460..3550723 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| DXN08_RS17715 () | 3550717..3554811 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| DXN08_RS17720 () | 3554830..3555276 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |