MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP047535 Location: 113447..122098 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10452 Replicon: chromosome
Accession: NZ_CP047535 Location: 113447..122098 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10452 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN08_RS00475 (109252) | 109252..110355 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| DXN08_RS00480 (110438) | 110438..110572 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| DXN08_RS00485 (110550) | 110550..110933 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| DXN08_RS00490 (111355) | 111355..112464 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| DXN08_RS00495 (112524) | 112524..113450 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| DXN08_RS00500 (113447) | 113447..114724 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| DXN08_RS00505 (114721) | 114721..115488 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| DXN08_RS00510 (115490) | 115490..116203 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| DXN08_RS00515 (116335) | 116335..116556 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN08_RS00520 (116553) | 116553..116921 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DXN08_RS00525 (117180) | 117180..118496 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| DXN08_RS00530 (118560) | 118560..119447 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| DXN08_RS00535 (119444) | 119444..120289 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| DXN08_RS00540 (120291) | 120291..121361 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| DXN08_RS00545 (121358) | 121358..122098 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| DXN08_RS00550 (122111) | 122111..122527 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| DXN08_RS00555 (122653) | 122653..124395 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| DXN08_RS00560 (124440) | 124440..125474 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| DXN08_RS00565 (125471) | 125471..126442 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |