MGE detailed information
MGE type: Prophage MGE length: 62247 bp
Accession: NZ_CP047325 Location: 4054160..4116406 Organism: Bacillus subtilis strain GOT9 Replicon: chromosome
Accession: NZ_CP047325 Location: 4054160..4116406 Organism: Bacillus subtilis strain GOT9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSY53_RS20775 () | 4049248..4049604 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| GSY53_RS20780 () | 4049622..4050182 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| GSY53_RS20785 () | 4050172..4050741 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| GSY53_RS20790 () | 4050753..4051043 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| GSY53_RS20795 () | 4051037..4051879 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| GSY53_RS20800 () | 4051897..4052997 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| GSY53_RS20805 () | 4053001..4053519 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| GSY53_RS20810 () | 4053881..4054021 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| GSY53_RS20815 () | 4054327..4055058 | - | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| GSY53_RS20820 () | 4055310..4056062 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| GSY53_RS20825 () | 4056249..4056875 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| GSY53_RS20830 () | 4056894..4057787 | - | 894 | WP_003229961.1 | 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating | VF |
| GSY53_RS20835 () | 4058039..4058761 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| GSY53_RS20840 () | 4058794..4059204 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| GSY53_RS20845 () | 4059400..4059747 | + | 348 | Protein_4043 | sigma-70 family RNA polymerase sigma factor | - |
| GSY53_RS20850 () | 4059778..4061280 | - | 1503 | WP_010886573.1 | Transposon gamma-delta resolvase ; Integrase | Integrase |
| GSY53_RS20855 () | 4061729..4062148 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| GSY53_RS20860 () | 4062160..4063200 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| GSY53_RS20865 () | 4063223..4063663 | - | 441 | WP_003229954.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| GSY53_RS20870 () | 4063724..4064041 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| GSY53_RS20875 () | 4064413..4065177 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| GSY53_RS20880 () | 4065620..4066747 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| GSY53_RS20885 () | 4066737..4066871 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| GSY53_RS20890 () | 4066981..4067139 | + | 159 | WP_159357156.1 | hypothetical protein | - |
| GSY53_RS20895 () | 4067509..4069104 | + | 1596 | WP_004399034.1 | type II toxin-antitoxin system toxin ribonuclease YqcG | - |
| GSY53_RS20900 () | 4069119..4069697 | + | 579 | WP_009967790.1 | type II toxin-antitoxin system antitoxin YqcF | - |
| GSY53_RS20905 () | 4069815..4069961 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| GSY53_RS20910 () | 4069958..4070320 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| GSY53_RS20915 () | 4070336..4070815 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| GSY53_RS20920 () | 4070980..4071798 | - | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| GSY53_RS20925 () | 4071843..4072265 | - | 423 | WP_003246208.1 | holin family protein | - |
| GSY53_RS20930 () | 4072310..4073203 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| GSY53_RS20935 () | 4073291..4073455 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| GSY53_RS20940 () | 4073452..4073787 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| GSY53_RS20945 () | 4073797..4074897 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| GSY53_RS20950 () | 4074900..4075172 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| GSY53_RS20955 () | 4075169..4075747 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| GSY53_RS20960 () | 4075731..4076777 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| GSY53_RS20965 () | 4076770..4077195 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| GSY53_RS20970 () | 4077208..4077471 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| GSY53_RS20975 () | 4077468..4078448 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| GSY53_RS20980 () | 4078461..4079120 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| GSY53_RS20985 () | 4079113..4083870 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| GSY53_RS20990 () | 4083873..4084010 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| GSY53_RS20995 () | 4084052..4084501 | - | 450 | WP_003229933.1 | phage portal protein | - |
| GSY53_RS21000 () | 4084647..4084826 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 4084750..4084972 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4084750..4084972 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4084750..4084972 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4084750..4084972 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| GSY53_RS21005 () | 4085206..4085295 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| GSY53_RS21010 () | 4085549..4085992 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| GSY53_RS21015 () | 4085995..4087395 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| GSY53_RS21020 () | 4087396..4087587 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| GSY53_RS21025 () | 4087584..4088021 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| GSY53_RS21030 () | 4088034..4088537 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| GSY53_RS21035 () | 4088534..4088896 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| GSY53_RS21040 () | 4088893..4089288 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| GSY53_RS21045 () | 4089292..4089603 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| GSY53_RS21050 () | 4089614..4090549 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| GSY53_RS21055 () | 4090568..4091536 | - | 969 | WP_003229921.1 | phage portal protein | - |
| GSY53_RS21060 () | 4091569..4092222 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| GSY53_RS21065 () | 4092263..4093180 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| GSY53_RS21070 () | 4093177..4094709 | - | 1533 | WP_159357157.1 | phage portal protein | - |
| GSY53_RS21075 () | 4094713..4096008 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| GSY53_RS21080 () | 4096001..4096720 | - | 720 | WP_003229916.1 | hypothetical protein | - |
| GSY53_RS21085 () | 4096788..4097252 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| GSY53_RS21090 () | 4097396..4097851 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| GSY53_RS21095 () | 4098049..4098978 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| GSY53_RS21100 () | 4099052..4099258 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| GSY53_RS21105 () | 4099340..4099768 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GSY53_RS21110 () | 4099864..4100013 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| GSY53_RS21115 () | 4100004..4100945 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| GSY53_RS21120 () | 4100827..4101504 | - | 678 | WP_116362964.1 | DnaD domain protein | - |
| GSY53_RS21125 () | 4101580..4102434 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| GSY53_RS21130 () | 4102437..4103396 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| GSY53_RS21135 () | 4103502..4103696 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| GSY53_RS21140 () | 4103656..4103829 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| GSY53_RS21145 () | 4103826..4104083 | - | 258 | WP_003245994.1 | hypothetical protein | - |
| GSY53_RS21150 () | 4104080..4104649 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| GSY53_RS21155 () | 4104723..4104863 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| GSY53_RS21160 () | 4104893..4105123 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| GSY53_RS21165 () | 4105300..4105650 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| GSY53_RS21170 () | 4105917..4106084 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| GSY53_RS21175 () | 4106439..4106975 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| GSY53_RS21180 () | 4107244..4107762 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| GSY53_RS21185 () | 4107810..4109312 | - | 1503 | WP_010886573.1 | Transposon gamma-delta resolvase ; Integrase | Integrase |
| GSY53_RS21190 () | 4109761..4110180 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| GSY53_RS21195 () | 4110192..4111232 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| GSY53_RS21200 () | 4111255..4111695 | - | 441 | WP_003229954.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| GSY53_RS21205 () | 4111756..4112073 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| GSY53_RS21210 () | 4112445..4113209 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| GSY53_RS21215 () | 4113652..4114779 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| GSY53_RS21220 () | 4114769..4114903 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| GSY53_RS21225 () | 4115012..4115170 | + | 159 | WP_159357156.1 | hypothetical protein | - |
| GSY53_RS21340 () | 4115539..4115881 | + | 343 | Protein_4120 | ribonuclease YeeF family protein | - |
| GSY53_RS21345 () | 4116020..4117035 | + | 1016 | Protein_4121 | ribonuclease YeeF family protein | - |
| GSY53_RS21350 () | 4117029..4117133 | + | 105 | WP_201449004.1 | hypothetical protein | - |
| GSY53_RS21240 () | 4117148..4117720 | + | 573 | Protein_4123 | suppressor of fused domain protein | - |
| GSY53_RS21245 () | 4117836..4117980 | + | 145 | Protein_4124 | hypothetical protein | - |
| GSY53_RS21250 () | 4117977..4118336 | - | 360 | Protein_4125 | hypothetical protein | - |
| GSY53_RS21255 () | 4118352..4118831 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| GSY53_RS21260 () | 4118988..4119194 | - | 207 | Protein_4127 | peptidoglycan-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0.002 |