MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 78498 bp
Accession: NZ_CP045999 Location: 1..78498 Organism: Escherichia coli strain 1916D18 Replicon: plasmid p1916D18-2
Accession: NZ_CP045999 Location: 1..78498 Organism: Escherichia coli strain 1916D18 Replicon: plasmid p1916D18-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD92_RS00355 () | 1524..6794 | + | 5271 | WP_063073481.1 | Multifunctional conjugation protein TraI | Relaxase |
| GJD92_RS00360 () | 6814..7560 | + | 747 | WP_063073482.1 | conjugal transfer pilus acetylase TraX | - |
| GJD92_RS00365 () | 7615..8175 | + | 561 | WP_063073483.1 | fertility inhibition protein FinO | - |
| GJD92_RS00370 () | 8309..8521 | + | 213 | WP_032084501.1 | hypothetical protein | - |
| - () | 9104..9165 | - | 62 | NuclAT_0 | - | - |
| - () | 9104..9165 | - | 62 | NuclAT_0 | - | - |
| - () | 9104..9165 | - | 62 | NuclAT_0 | - | - |
| - () | 9104..9165 | - | 62 | NuclAT_0 | - | - |
| GJD92_RS00375 () | 9152..9355 | + | 204 | Protein_5 | type I toxin-antitoxin system Hok family toxin | - |
| GJD92_RS00380 () | 9618..9875 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| GJD92_RS00385 () | 10107..10181 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| GJD92_RS00390 () | 10174..10656 | + | 483 | WP_074149688.1 | hypothetical protein | - |
| GJD92_RS00395 () | 10649..11506 | + | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| GJD92_RS00400 () | 12400..14151 | - | 1752 | Protein_10 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GJD92_RS00405 () | 14140..14547 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| GJD92_RS00410 () | 14685..15569 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| GJD92_RS00415 () | 15601..16800 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| GJD92_RS00420 () | 16906..17556 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GJD92_RS00425 () | 17588..17830 | - | 243 | WP_000844627.1 | transposase | - |
| GJD92_RS00430 () | 17888..20854 | - | 2967 | WP_154139459.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GJD92_RS00435 () | 20858..21418 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| GJD92_RS00440 () | 21728..23305 | + | 1578 | WP_001513488.1 | Aerotaxis receptor | VF |
| GJD92_RS00445 () | 23550..23834 | + | 285 | WP_062894229.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GJD92_RS00450 () | 23834..24109 | + | 276 | WP_063073486.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJD92_RS00455 () | 24376..24864 | - | 489 | Protein_21 | IS91 family transposase ISSbo1 | Transposase |
| GJD92_RS00460 () | 25012..25324 | - | 313 | Protein_22 | IS66 family insertion sequence element accessory protein TnpB | - |
| GJD92_RS00470 () | 27175..28311 | + | 1137 | WP_033804283.1 | Outer membrane porin protein OmpD | VF |
| GJD92_RS00475 () | 28407..30104 | + | 1698 | WP_000401034.1 | sulfatase | - |
| GJD92_RS00480 () | 30173..30430 | + | 258 | WP_001032733.1 | hypothetical protein | - |
| GJD92_RS00485 () | 30689..31386 | + | 698 | Protein_27 | IS1 family transposase IS1G | Transposase |
| GJD92_RS00495 () | 32755..33489 | + | 735 | Protein_29 | IS66 family transposase ISEc8 | Transposase |
| GJD92_RS00500 () | 33524..34213 | + | 690 | Protein_30 | IS3 family transposase ISEhe3 | Transposase |
| GJD92_RS00505 () | 34391..38467 | - | 4077 | WP_063073396.1 | Serine protease SepA autotransporter | VF |
| GJD92_RS00510 () | 38644..39827 | + | 1184 | Protein_32 | IS3 family transposase ISEhe3 | Transposase |
| GJD92_RS00515 () | 40126..40416 | + | 291 | WP_000990619.1 | hypothetical protein | - |
| GJD92_RS00520 () | 41232..41450 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GJD92_RS00525 () | 41452..41757 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GJD92_RS00530 () | 41758..42564 | + | 807 | WP_020219156.1 | site-specific integrase | - |
| GJD92_RS00535 () | 42639..43852 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD92_RS00540 () | 44096..44788 | - | 693 | WP_020219155.1 | IS21 family transposase IS100kyp | Transposase |
| GJD92_RS00545 () | 44788..45288 | - | 501 | Protein_39 | IS21 family transposase IS100kyp | Transposase |
| GJD92_RS00550 () | 45341..45911 | + | 571 | Protein_40 | IS3 family transposase | - |
| GJD92_RS00555 () | 46177..47157 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| GJD92_RS00560 () | 47259..49103 | - | 1845 | Protein_42 | Outer membrane protein IcsA autotransporter | VF |
| GJD92_RS00565 () | 49114..50327 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD92_RS00570 () | 50286..51910 | - | 1625 | Protein_44 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| GJD92_RS00575 () | 52460..53688 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| GJD92_RS00580 () | 53967..54916 | + | 950 | Protein_46 | Outer membrane protease OmpP | VF |
| GJD92_RS00585 () | 55009..56508 | + | 1500 | WP_063073405.1 | alpha/beta hydrolase | - |
| GJD92_RS00590 () | 56884..57144 | + | 261 | Protein_48 | hypothetical protein | - |
| GJD92_RS00595 () | 57265..58005 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| GJD92_RS00600 () | 58290..59267 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| GJD92_RS00605 () | 60442..61083 | - | 642 | WP_089533208.1 | hypothetical protein | - |
| GJD92_RS00610 () | 61705..62685 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| GJD92_RS00615 () | 64038..64691 | + | 654 | Protein_53 | IS21 family transposase IS21 | Transposase |
| GJD92_RS00620 () | 64691..65475 | + | 785 | Protein_54 | ATP-binding protein | - |
| GJD92_RS00625 () | 65534..65629 | - | 96 | Protein_55 | VapC toxin family PIN domain ribonuclease | - |
| GJD92_RS00630 () | 65626..65856 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GJD92_RS00635 () | 66143..67165 | - | 1023 | WP_063073408.1 | hypothetical protein | - |
| GJD92_RS00640 () | 67150..68712 | - | 1563 | WP_063073409.1 | AAA family ATPase | - |
| GJD92_RS00645 () | 68786..69202 | - | 417 | WP_063073410.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GJD92_RS00650 () | 69199..69429 | - | 231 | WP_063073411.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GJD92_RS23875 () | 69386..69565 | + | 180 | Protein_61 | hypothetical protein | - |
| GJD92_RS00655 () | 69709..70413 | - | 705 | WP_154139461.1 | IS6 family transposase IS15DI | Transposase |
| GJD92_RS00660 () | 70479..70910 | + | 432 | WP_001707302.1 | hypothetical protein | - |
| GJD92_RS00665 () | 70907..71698 | + | 792 | WP_000016494.1 | site-specific integrase | - |
| GJD92_RS00670 () | 71850..72125 | - | 276 | WP_050858693.1 | hypothetical protein | - |
| GJD92_RS00675 () | 72119..72763 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| GJD92_RS00680 () | 72992..73963 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| GJD92_RS00685 () | 73968..74360 | + | 393 | WP_063073471.1 | plasmid partitioning/stability family protein | - |
| GJD92_RS00690 () | 74365..75635 | - | 1271 | Protein_69 | Y-family DNA polymerase | - |
| GJD92_RS00695 () | 75635..76072 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GJD92_RS00700 () | 76069..76317 | - | 249 | WP_001775014.1 | DinI-like family protein | - |
| GJD92_RS00705 () | 76735..77637 | + | 903 | WP_148934335.1 | DUF1281 domain-containing protein | - |
| GJD92_RS00710 () | 77641..77946 | + | 306 | WP_063073472.1 | hypothetical protein | - |
| GJD92_RS23880 () | 78023..78475 | + | 453 | Protein_74 | DNA methylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|