MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 65782 bp
Accession: NZ_CP045211 Location: 1..65782 Organism: Escherichia coli strain 4 Replicon: plasmid p65-4
Accession: NZ_CP045211 Location: 1..65782 Organism: Escherichia coli strain 4 Replicon: plasmid p65-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GC226_RS24645 (1) | 1..858 | + | 858 | WP_000130991.1 | incFII family plasmid replication initiator RepA | - |
| GC226_RS24650 (1829) | 1829..2068 | + | 240 | WP_000859017.1 | winged helix-turn-helix transcriptional regulator | - |
| GC226_RS24655 (2683) | 2683..4449 | + | 1767 | WP_047082308.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| GC226_RS24660 (4462) | 4462..13947 | + | 9486 | WP_228400231.1 | contact-dependent inhibition toxin CdiA | - |
| GC226_RS24665 (13934) | 13934..14236 | + | 303 | WP_001370014.1 | hypothetical protein | - |
| GC226_RS24670 (14246) | 14246..14428 | + | 183 | WP_000205441.1 | hypothetical protein | - |
| GC226_RS24675 (14844) | 14844..15467 | + | 624 | WP_064767287.1 | hypothetical protein | - |
| GC226_RS24680 (15464) | 15464..15721 | + | 258 | WP_000812109.1 | hypothetical protein | - |
| GC226_RS24685 (15807) | 15807..16301 | + | 495 | WP_000388880.1 | DUF2569 domain-containing protein | - |
| GC226_RS24690 (16387) | 16387..16644 | + | 258 | WP_001370053.1 | hypothetical protein | - |
| GC226_RS24695 (17311) | 17311..17547 | + | 237 | WP_032257624.1 | colicin V immunity protein | - |
| GC226_RS24700 (17525) | 17525..17602 | + | 78 | Protein_11 | colicin V | - |
| GC226_RS24705 (17870) | 17870..18258 | - | 389 | Protein_12 | Tn3 family transposase | - |
| GC226_RS24710 (18312) | 18312..18989 | + | 678 | WP_032320235.1 | IS66-like element accessory protein TnpA | - |
| GC226_RS24715 (18989) | 18989..19336 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| GC226_RS24720 (19356) | 19356..20927 | + | 1572 | WP_228400232.1 | IS66-like element ISCro1 family transposase | - |
| GC226_RS24725 (20953) | 20953..21096 | - | 144 | Protein_16 | DNA-binding protein | - |
| GC226_RS24730 (21160) | 21160..22322 | + | 1163 | WP_148713149.1 | IS3-like element IS3 family transposase | - |
| GC226_RS24735 (22353) | 22353..22757 | - | 405 | Protein_18 | restriction endonuclease | - |
| GC226_RS24740 (22935) | 22935..23150 | - | 216 | Protein_19 | peptidase | - |
| GC226_RS24745 (24241) | 24241..24366 | + | 126 | Protein_20 | antirestriction protein | - |
| GC226_RS24750 (24418) | 24418..24609 | + | 192 | WP_001027503.1 | hypothetical protein | - |
| GC226_RS24755 (25233) | 25233..25517 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GC226_RS24760 (25517) | 25517..25807 | + | 291 | WP_000421260.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GC226_RS24765 (25883) | 25883..27115 | + | 1233 | Protein_24 | IS3 family transposase | - |
| GC226_RS24770 (28038) | 28038..28595 | + | 558 | WP_000949484.1 | type 1 fimbrial major subunit FimA | - |
| GC226_RS24775 (28656) | 28656..29204 | + | 549 | WP_000277046.1 | fimbrial protein | - |
| GC226_RS24780 (29225) | 29225..29980 | + | 756 | WP_001369992.1 | fimbria/pilus periplasmic chaperone | - |
| GC226_RS24785 (30079) | 30079..32712 | + | 2634 | WP_001199196.1 | fimbrial biogenesis usher protein | - |
| GC226_RS24790 (32728) | 32728..33783 | + | 1056 | WP_001039059.1 | fimbrial protein | - |
| GC226_RS24795 (33801) | 33801..34367 | + | 567 | WP_000987963.1 | fimbrial protein | - |
| GC226_RS24800 (35002) | 35002..35589 | + | 588 | WP_000824709.1 | tyrosine-type DNA invertase | - |
| GC226_RS24805 (35886) | 35886..36980 | - | 1095 | WP_155954866.1 | EAL domain-containing protein | - |
| GC226_RS24810 (37009) | 37009..37380 | - | 372 | WP_228400227.1 | hypothetical protein | - |
| GC226_RS24815 (38210) | 38210..38803 | - | 594 | WP_000166787.1 | tyrosine-type DNA invertase | - |
| GC226_RS24820 (39704) | 39704..39814 | + | 111 | WP_224068057.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GC226_RS24825 (40187) | 40187..40852 | + | 666 | Protein_36 | tyrosine-type recombinase/integrase | - |
| GC226_RS24830 (41166) | 41166..41411 | - | 246 | Protein_37 | integrase core domain-containing protein | - |
| GC226_RS24835 (41413) | 41413..41700 | - | 288 | WP_001270419.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GC226_RS24840 (41697) | 41697..41948 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GC226_RS24845 (42336) | 42336..43541 | + | 1206 | WP_000817641.1 | AAA family ATPase | - |
| GC226_RS24850 (43538) | 43538..44500 | + | 963 | WP_000756326.1 | ParB family protein | - |
| GC226_RS24855 (44733) | 44733..45512 | + | 780 | Protein_42 | IS4 family transposase | - |
| GC226_RS24860 (45643) | 45643..45726 | - | 84 | Protein_43 | DUF4113 domain-containing protein | - |
| GC226_RS24865 (45728) | 45728..46256 | + | 529 | Protein_44 | DUF1281 domain-containing protein | - |
| GC226_RS24870 (46260) | 46260..46565 | + | 306 | WP_032163448.1 | hypothetical protein | - |
| GC226_RS24875 (46781) | 46781..47800 | + | 1020 | WP_000878014.1 | IS110 family transposase | - |
| GC226_RS24880 (48077) | 48077..48760 | + | 684 | WP_000086114.1 | DNA methylase | - |
| GC226_RS24885 (48761) | 48761..48982 | + | 222 | WP_001104895.1 | hypothetical protein | - |
| GC226_RS24890 (48996) | 48996..49430 | + | 435 | WP_000274460.1 | DUF1380 family protein | - |
| GC226_RS24895 (49481) | 49481..50257 | + | 777 | WP_024177483.1 | hypothetical protein | - |
| GC226_RS24900 (50672) | 50672..51097 | + | 426 | WP_001198953.1 | antirestriction protein | - |
| GC226_RS24905 (51144) | 51144..51566 | + | 423 | WP_000271759.1 | DUF1380 family protein | - |
| GC226_RS24910 (51563) | 51563..51754 | + | 192 | WP_001027514.1 | hypothetical protein | - |
| GC226_RS24915 (51717) | 51717..52058 | + | 342 | WP_001370022.1 | hypothetical protein | - |
| GC226_RS24920 (52728) | 52728..52958 | + | 231 | WP_000155845.1 | hypothetical protein | - |
| GC226_RS24925 (53010) | 53010..54371 | + | 1362 | WP_000175495.1 | DUF3560 domain-containing protein | - |
| GC226_RS24930 (54418) | 54418..54981 | + | 564 | WP_047081685.1 | class I SAM-dependent methyltransferase | - |
| GC226_RS24935 (55070) | 55070..55493 | - | 424 | Protein_58 | hypothetical protein | - |
| GC226_RS24940 (55795) | 55795..56322 | + | 528 | WP_001562891.1 | single-stranded DNA-binding protein | - |
| GC226_RS24945 (56380) | 56380..56613 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| GC226_RS24950 (56674) | 56674..58638 | + | 1965 | WP_224068100.1 | ParB/RepB/Spo0J family partition protein | - |
| GC226_RS24955 (58707) | 58707..59141 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| GC226_RS24960 (59138) | 59138..59857 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| GC226_RS24965 (59854) | 59854..60168 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - (60125) | 60125..60310 | + | 186 | NuclAT_0 | - | Antitoxin Detail |
| - (60125) | 60125..60310 | + | 186 | NuclAT_0 | - | Antitoxin Detail |
| - (60125) | 60125..60310 | + | 186 | NuclAT_0 | - | Antitoxin Detail |
| - (60125) | 60125..60310 | + | 186 | NuclAT_0 | - | Antitoxin Detail |
| GC226_RS24970 (60318) | 60318..60470 | + | 153 | Protein_65 | DUF5431 family protein | - |
| GC226_RS24975 (60415) | 60415..60537 | + | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| GC226_RS24980 (60630) | 60630..60794 | + | 165 | WP_187415256.1 | hypothetical protein | - |
| GC226_RS24985 (60863) | 60863..61513 | + | 651 | WP_228400228.1 | IS66-like element accessory protein TnpA | - |
| GC226_RS24990 (61513) | 61513..61860 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| GC226_RS24995 (61880) | 61880..63451 | + | 1572 | WP_228400229.1 | IS66 family transposase | - |
| GC226_RS25000 (63565) | 63565..64026 | + | 462 | WP_000760083.1 | thermonuclease family protein | - |
| GC226_RS25005 (64129) | 64129..64512 | + | 384 | WP_228400230.1 | hypothetical protein | - |
| - (64687) | 64687..64743 | - | 57 | NuclAT_1 | - | - |
| - (64687) | 64687..64743 | - | 57 | NuclAT_1 | - | - |
| - (64687) | 64687..64743 | - | 57 | NuclAT_1 | - | - |
| - (64687) | 64687..64743 | - | 57 | NuclAT_1 | - | - |
| GC226_RS25010 (64791) | 64791..64940 | + | 150 | WP_001336447.1 | Hok/Gef family protein | - |
| GC226_RS25015 (65224) | 65224..65481 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| GC226_RS25020 (65586) | 65586..65770 | + | 185 | Protein_75 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|