MGE detailed information
MGE type: Prophage MGE length: 28933 bp
Accession: NZ_CP044410 Location: 2110299..2139231 Organism: Escherichia coli strain ecMN1F Replicon: chromosome
Accession: NZ_CP044410 Location: 2110299..2139231 Organism: Escherichia coli strain ecMN1F Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNW43_RS10205 () | 2105805..2107331 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| FNW43_RS10210 () | 2107368..2108813 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| FNW43_RS10215 () | 2108813..2110123 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| FNW43_RS10220 () | 2110299..2111207 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| FNW43_RS10225 () | 2111537..2112100 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| FNW43_RS10230 () | 2112121..2113353 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| FNW43_RS10235 () | 2113608..2114591 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FNW43_RS10240 () | 2115069..2116442 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| FNW43_RS10245 () | 2116571..2117506 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FNW43_RS10250 () | 2117558..2118793 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| FNW43_RS10255 () | 2118795..2119010 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| FNW43_RS10260 () | 2119089..2119298 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2119114..2119292 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2119114..2119292 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2119114..2119292 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2119114..2119292 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FNW43_RS10265 () | 2119291..2119485 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FNW43_RS10270 () | 2119542..2120351 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| FNW43_RS10275 () | 2120344..2122944 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| FNW43_RS10280 () | 2123046..2123321 | - | 276 | WP_000632297.1 | protein RacC | - |
| FNW43_RS10285 () | 2123396..2123566 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| FNW43_RS10290 () | 2123566..2123787 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| FNW43_RS10295 () | 2124229..2124717 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| FNW43_RS10300 () | 2124714..2124869 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| FNW43_RS10310 () | 2125323..2125799 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| FNW43_RS10315 () | 2125923..2126219 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| FNW43_RS10320 () | 2126242..2126664 | + | 423 | WP_000693797.1 | phage protein | - |
| FNW43_RS10325 () | 2126677..2127533 | + | 857 | Protein_1980 | DUF1376 domain-containing protein | - |
| FNW43_RS10330 () | 2127540..2128286 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| FNW43_RS10335 () | 2128309..2128761 | + | 453 | Protein_1982 | DUF1627 domain-containing protein | - |
| FNW43_RS10340 () | 2128957..2129142 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| FNW43_RS10345 () | 2129339..2130796 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| FNW43_RS10350 () | 2130934..2131197 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FNW43_RS10355 () | 2131178..2131537 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| FNW43_RS10365 () | 2132011..2132943 | + | 933 | Protein_1987 | phage tail length tape measure family protein | - |
| FNW43_RS10370 () | 2132946..2133161 | + | 216 | Protein_1988 | Ail/Lom family outer membrane beta-barrel protein | - |
| FNW43_RS10375 () | 2133303..2134283 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| FNW43_RS10380 () | 2134353..2134541 | + | 189 | Protein_1990 | Ail/Lom family outer membrane beta-barrel protein | - |
| FNW43_RS10385 () | 2134606..2137968 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FNW43_RS10390 () | 2137968..2138543 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| FNW43_RS10395 () | 2138641..2139231 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FNW43_RS10400 () | 2139548..2139781 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| FNW43_RS10405 () | 2139850..2139963 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FNW43_RS10410 () | 2140742..2141176 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| FNW43_RS10415 () | 2141317..2142450 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0.008 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0.008 |