MGE detailed information
MGE type: Conjugative plasmid MGE length: 116228 bp
Accession: NZ_CP043851 Location: 1..116228 Organism: Escherichia coli ATCC 8739 Replicon: plasmid unnamed
Accession: NZ_CP043851 Location: 1..116228 Organism: Escherichia coli ATCC 8739 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1719_RS00005 () | 45..152 | + | 108 | WP_203448609.1 | Hok/Gef family protein | - |
| F1719_RS00010 () | 173..1386 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
| F1719_RS00015 () | 1396..1464 | + | 69 | Protein_2 | Hok/Gef family protein | - |
| F1719_RS00020 () | 2385..2672 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| F1719_RS00025 () | 2790..3611 | + | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| F1719_RS00030 () | 3908..4510 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| F1719_RS00035 () | 4831..5214 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| F1719_RS00040 () | 5401..6090 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| F1719_RS00045 () | 6189..6584 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| F1719_RS00050 () | 6617..6982 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| F1719_RS00055 () | 6997..7308 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| F1719_RS00060 () | 7330..7896 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| F1719_RS00065 () | 7883..8404 | + | 522 | Protein_12 | type-F conjugative transfer system secretin TraK | - |
| F1719_RS00070 () | 8399..8542 | + | 144 | Protein_13 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| F1719_RS00075 () | 8472..8813 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| F1719_RS00080 () | 8767..9180 | + | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
| F1719_RS00085 () | 9180..10553 | + | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
| F1719_RS00090 () | 10550..13372 | + | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| F1719_RS00095 () | 13388..13885 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
| F1719_RS00100 () | 13917..14648 | + | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| F1719_RS00105 () | 14901..15566 | + | 666 | Protein_20 | type IV secretion system DNA-binding domain-containing protein | - |
| F1719_RS00110 () | 15596..17209 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| F1719_RS00115 () | 17240..17590 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| F1719_RS00120 () | 17587..18012 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| F1719_RS00125 () | 18095..19594 | + | 1500 | Protein_24 | type IV conjugative transfer system coupling protein TraD | - |
| F1719_RS00130 () | 19603..20001 | - | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| F1719_RS00135 () | 20001..20228 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| F1719_RS00140 () | 20310..23724 | + | 3415 | Protein_27 | Multifunctional conjugation protein TraI | Relaxase |
| F1719_RS00145 () | 23744..24490 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| F1719_RS00150 () | 24549..25409 | + | 861 | WP_000704513.1 | putative protein YcjY | VF |
| F1719_RS00155 () | 25512..26072 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| F1719_RS00160 () | 26208..26420 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| F1719_RS00165 () | 26666..26740 | + | 75 | Protein_32 | endonuclease | - |
| - () | 26996..27057 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26996..27057 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26996..27057 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26996..27057 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| F1719_RS00170 () | 27044..27250 | + | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| F1719_RS00175 () | 27534..27791 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| F1719_RS00180 () | 28023..28097 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| F1719_RS00185 () | 28090..28572 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| F1719_RS00190 () | 28565..29422 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| F1719_RS00195 () | 30358..30702 | + | 345 | WP_001553768.1 | hypothetical protein | - |
| F1719_RS00200 () | 30883..31998 | - | 1116 | Protein_39 | IS91 family transposase IS91 | Transposase |
| F1719_RS00205 () | 31998..32363 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| F1719_RS00210 () | 32485..33636 | - | 1152 | WP_001442799.1 | IS30 family transposase IS30D | Transposase |
| F1719_RS00215 () | 33704..33961 | - | 258 | Protein_42 | IS3 family transposase IS911 | Transposase |
| F1719_RS00220 () | 34057..34272 | + | 216 | Protein_43 | helix-turn-helix transcriptional regulator | - |
| F1719_RS00225 () | 34240..34431 | - | 192 | Protein_44 | IS91 family transposase | - |
| F1719_RS00230 () | 34602..38735 | + | 4134 | WP_001080137.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| F1719_RS00235 () | 38844..39296 | + | 453 | WP_001553770.1 | peptide deformylase | - |
| F1719_RS00240 () | 39283..39549 | - | 267 | Protein_47 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| F1719_RS00245 () | 39589..41126 | - | 1538 | Protein_48 | IS66 family transposase ISEc8 | Transposase |
| F1719_RS00250 () | 41176..41523 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| F1719_RS00255 () | 41520..41900 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| F1719_RS00260 () | 41976..42956 | - | 981 | WP_001017346.1 | NAD(P)-binding domain-containing protein | - |
| F1719_RS00265 () | 42953..43222 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| F1719_RS00270 () | 43224..44001 | - | 778 | Protein_53 | Gfo/Idh/MocA family oxidoreductase | - |
| F1719_RS00275 () | 44162..44398 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| F1719_RS00280 () | 44376..44687 | + | 312 | WP_001259758.1 | colicin V | - |
| F1719_RS00285 () | 44857..46971 | - | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| F1719_RS00290 () | 46946..48220 | - | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| F1719_RS00295 () | 48902..49099 | + | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| F1719_RS00300 () | 49096..49278 | + | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F1719_RS00305 () | 49377..49685 | + | 309 | WP_000377483.1 | hypothetical protein | - |
| F1719_RS00310 () | 50245..51279 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| F1719_RS00315 () | 52134..53582 | + | 1449 | Protein_62 | Ferric enterobactin receptor | VF |
| F1719_RS00325 () | 55026..55757 | + | 732 | Protein_64 | Ferric enterobactin receptor | VF |
| F1719_RS00330 () | 55802..56758 | - | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
| F1719_RS00335 () | 56843..58072 | - | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| F1719_RS00340 () | 58176..61835 | - | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| F1719_RS00345 () | 61975..63090 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| F1719_RS00350 () | 64326..65425 | - | 1100 | Protein_69 | IS481 family transposase ISKpn28 | Transposase |
| F1719_RS00355 () | 65979..66178 | + | 200 | Protein_70 | lysis protein | - |
| F1719_RS00360 () | 66236..66529 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| F1719_RS00365 () | 67109..67674 | + | 566 | Protein_72 | IS3 family transposase IS2 | Transposase |
| F1719_RS00375 () | 68915..69643 | + | 729 | Protein_74 | IS3 family transposase IS2 | Transposase |
| F1719_RS00380 () | 70885..72078 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| F1719_RS00385 () | 72256..72405 | + | 150 | Protein_76 | IS3 family transposase IS2 | Transposase |
| F1719_RS00390 () | 72715..74104 | + | 1390 | Protein_77 | ISNCY family transposase ISKpn21 | Transposase |
| F1719_RS00395 () | 74339..75280 | + | 942 | WP_000974762.1 | hypothetical protein | - |
| F1719_RS00400 () | 75409..75603 | - | 195 | Protein_79 | IS200/IS605-like element IS200C family transposase | - |
| F1719_RS00405 () | 76077..77447 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| F1719_RS00410 () | 77451..79391 | - | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| F1719_RS00415 () | 79388..80575 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| F1719_RS00420 () | 81556..81881 | + | 326 | Protein_83 | IS3 family transposase IS911 | Transposase |
| F1719_RS00425 () | 82029..83228 | - | 1200 | Protein_84 | IS3 family transposase IS629 | Transposase |
| F1719_RS00430 () | 83412..83570 | + | 159 | WP_001324039.1 | integrase core domain-containing protein | - |
| F1719_RS00435 () | 84843..85796 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| F1719_RS00440 () | 86229..87338 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| F1719_RS00445 () | 87407..88309 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| F1719_RS00450 () | 88683..88871 | + | 189 | WP_001324033.1 | hypothetical protein | - |
| F1719_RS00455 () | 88992..89732 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| F1719_RS00460 () | 90017..90994 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| F1719_RS00465 () | 91740..92063 | + | 324 | Protein_92 | IS21 family transposase IS21 | Transposase |
| F1719_RS00470 () | 92065..92169 | + | 105 | Protein_93 | AAA family ATPase | - |
| F1719_RS00475 () | 92230..92743 | + | 514 | Protein_94 | DUF4113 domain-containing protein | - |
| F1719_RS00480 () | 92923..93620 | - | 698 | Protein_95 | IS1 family transposase IS1S | Transposase |
| F1719_RS00485 () | 93976..94890 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| F1719_RS00490 () | 94890..95717 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| F1719_RS00495 () | 95714..96571 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| F1719_RS00500 () | 96568..97425 | + | 858 | WP_203448608.1 | Manganese transport system membrane protein MntB | ARG |
| F1719_RS00505 () | 97659..97916 | - | 258 | Protein_100 | Tn3 family transposase | - |
| F1719_RS00510 () | 97914..98327 | + | 414 | Protein_101 | phosphopyruvate hydratase | - |
| F1719_RS00515 () | 98668..99048 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| F1719_RS00520 () | 99428..100621 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| F1719_RS00525 () | 100757..102481 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| F1719_RS00530 () | 102482..103429 | + | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| F1719_RS00535 () | 103429..105171 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| F1719_RS00540 () | 105168..106445 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| F1719_RS00545 () | 106527..108728 | + | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| F1719_RS00550 () | 109213..109910 | + | 698 | Protein_109 | IS1 family transposase IS1S | Transposase |
| F1719_RS00555 () | 110210..111376 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| F1719_RS00560 () | 111376..112347 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| F1719_RS00565 () | 113486..113692 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| F1719_RS00570 () | 113718..114257 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| F1719_RS00575 () | 114330..114563 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| F1719_RS00580 () | 114591..114788 | + | 198 | Protein_115 | hypothetical protein | - |
| F1719_RS00585 () | 114843..115277 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| F1719_RS00590 () | 115274..115993 | + | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| F1719_RS00595 () | 116005..116193 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 116005..116228 | + | 224 | NuclAT_0 | - | - |
| - () | 116005..116228 | + | 224 | NuclAT_0 | - | - |
| - () | 116005..116228 | + | 224 | NuclAT_0 | - | - |
| - () | 116005..116228 | + | 224 | NuclAT_0 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|