MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122305 bp
Accession: NZ_CP043276 Location: 1..122305 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid p1_035148
Accession: NZ_CP043276 Location: 1..122305 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid p1_035148
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK53_RS23015 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| FYK53_RS23020 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| FYK53_RS23025 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| FYK53_RS23030 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| FYK53_RS23035 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| FYK53_RS23040 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| FYK53_RS23045 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| FYK53_RS23050 (6210) | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| FYK53_RS23055 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| FYK53_RS23060 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| FYK53_RS23065 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| FYK53_RS23070 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| FYK53_RS23075 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| FYK53_RS23080 (12598) | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| FYK53_RS23085 (12997) | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FYK53_RS23090 (14028) | 14028..14504 | + | 477 | WP_112031936.1 | non-heme ferritin-like protein | - |
| FYK53_RS23095 (14716) | 14716..14940 | - | 225 | Protein_16 | AAA family ATPase | - |
| FYK53_RS23100 (14947) | 14947..15969 | + | 1023 | Protein_17 | family 1 glycosylhydrolase | - |
| FYK53_RS23105 (16128) | 16128..16688 | - | 561 | WP_112031937.1 | TetR/AcrR family transcriptional regulator | - |
| FYK53_RS23110 (16776) | 16776..17327 | - | 552 | WP_112031938.1 | OsmC family protein | - |
| FYK53_RS23115 (17418) | 17418..17753 | - | 336 | WP_003863470.1 | carboxymuconolactone decarboxylase family protein | - |
| FYK53_RS23120 (17780) | 17780..18574 | - | 795 | WP_112031939.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| FYK53_RS23125 (18731) | 18731..19072 | - | 342 | WP_112031940.1 | thioredoxin family protein | - |
| FYK53_RS23130 (19287) | 19287..20396 | + | 1110 | WP_112031941.1 | alkene reductase | - |
| FYK53_RS23135 (20465) | 20465..21163 | + | 699 | WP_112031942.1 | DsbA family oxidoreductase | - |
| FYK53_RS23140 (21505) | 21505..22410 | - | 906 | WP_112031943.1 | LysR family transcriptional regulator | - |
| FYK53_RS23145 (22576) | 22576..22902 | + | 327 | WP_112031944.1 | thioredoxin | - |
| FYK53_RS23150 (23112) | 23112..23321 | + | 210 | WP_112031945.1 | DUF1471 domain-containing protein | - |
| FYK53_RS23155 (23493) | 23493..23905 | + | 413 | Protein_28 | IS3 family transposase ISVch4 | Transposase |
| FYK53_RS23160 (23984) | 23984..24688 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FYK53_RS23165 (26080) | 26080..27555 | - | 1476 | WP_112031946.1 | SEC-C metal-binding domain-containing protein | - |
| FYK53_RS23170 (29479) | 29479..30198 | - | 720 | WP_013263795.1 | replication initiation protein | - |
| FYK53_RS23175 (30758) | 30758..31099 | + | 342 | WP_000057569.1 | antirestriction protein ArdAB regulator ArdK | - |
| FYK53_RS23180 (31114) | 31114..31905 | - | 792 | WP_001452808.1 | SprT-like domain-containing protein | - |
| FYK53_RS23185 (32056) | 32056..33321 | - | 1266 | WP_016359299.1 | translesion error-prone DNA polymerase V subunit MucB | - |
| FYK53_RS23190 (33309) | 33309..33749 | - | 441 | WP_104558120.1 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| FYK53_RS23195 (34165) | 34165..34590 | + | 426 | WP_000447669.1 | antirestriction protein ArdB | - |
| FYK53_RS23200 (34648) | 34648..35052 | + | 405 | WP_000881513.1 | antirestriction protein ArdAB regulator ArdR | - |
| FYK53_RS23205 (35062) | 35062..35301 | + | 240 | WP_016359300.1 | hypothetical protein | - |
| FYK53_RS23210 (36186) | 36186..36482 | + | 297 | WP_000545925.1 | protein CcgD | - |
| FYK53_RS24345 (36920) | 36920..37048 | - | 129 | WP_261635720.1 | hypothetical protein | - |
| FYK53_RS23215 (37166) | 37166..37954 | - | 789 | WP_112031950.1 | MipA/OmpV family protein | - |
| FYK53_RS23220 (38080) | 38080..38772 | + | 693 | WP_014063958.1 | Phosphate regulon transcriptional regulatory protein PhoB | VF |
| FYK53_RS23225 (38769) | 38769..39950 | + | 1182 | WP_112031951.1 | ATP-binding protein | - |
| FYK53_RS23230 (40042) | 40042..41187 | + | 1146 | WP_112031952.1 | efflux RND transporter periplasmic adaptor subunit | - |
| FYK53_RS23235 (41184) | 41184..44243 | + | 3060 | WP_112031953.1 | efflux RND transporter permease subunit | - |
| FYK53_RS23240 (44410) | 44410..44742 | + | 333 | Protein_46 | Tn3 family transposase ISPsy42 | Transposase |
| FYK53_RS23245 (44784) | 44784..45488 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FYK53_RS23250 (45541) | 45541..48435 | - | 2895 | Protein_48 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| FYK53_RS23255 (48438) | 48438..48752 | - | 315 | Protein_49 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| FYK53_RS23260 (48806) | 48806..49510 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FYK53_RS23265 (49580) | 49580..50053 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| FYK53_RS23270 (50209) | 50209..51321 | + | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| FYK53_RS23275 (51267) | 51267..51971 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FYK53_RS23280 (52038) | 52038..52654 | - | 617 | Protein_54 | transposase | - |
| FYK53_RS23285 (53049) | 53049..53705 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| FYK53_RS23290 (54024) | 54024..54452 | - | 429 | Protein_56 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FYK53_RS23295 (54485) | 54485..55876 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| FYK53_RS23300 (55913) | 55913..56485 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| FYK53_RS23305 (56622) | 56622..57167 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| FYK53_RS23310 (57330) | 57330..57572 | + | 243 | WP_000844627.1 | transposase | - |
| FYK53_RS23315 (57604) | 57604..58254 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| FYK53_RS23320 (58360) | 58360..59559 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| FYK53_RS23325 (59591) | 59591..60475 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| FYK53_RS23330 (60613) | 60613..61005 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| FYK53_RS23335 (61009) | 61009..62760 | + | 1752 | Protein_65 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FYK53_RS23340 (62975) | 62975..64747 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| FYK53_RS23345 (65032) | 65032..65433 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FYK53_RS23350 (65366) | 65366..65623 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FYK53_RS23355 (65716) | 65716..66369 | - | 654 | WP_000616800.1 | type II CAAX endopeptidase family protein | - |
| FYK53_RS23360 (67308) | 67308..68165 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| FYK53_RS23365 (68158) | 68158..68232 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FYK53_RS23370 (68467) | 68467..68724 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| FYK53_RS23375 (69129) | 69129..70151 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| FYK53_RS23380 (70623) | 70623..70976 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| FYK53_RS23385 (71389) | 71389..71967 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| FYK53_RS23390 (72000) | 72000..72697 | + | 698 | WP_223230354.1 | IS1 family transposase IS1A | Transposase |
| FYK53_RS23395 (72812) | 72812..73168 | + | 357 | WP_000229735.1 | IS66 family transposase ISEc23 | Transposase |
| FYK53_RS23400 (73165) | 73165..73515 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| FYK53_RS23405 (73546) | 73546..73767 | + | 222 | WP_000080227.1 | hypothetical protein | - |
| FYK53_RS23410 (73719) | 73719..74060 | + | 342 | Protein_80 | IS66 family transposase IS682 | Transposase |
| FYK53_RS23415 (74124) | 74124..74603 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| FYK53_RS23420 (74684) | 74684..76087 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| FYK53_RS23425 (76135) | 76135..77139 | - | 1005 | WP_086625071.1 | Ornithine carbamoyltransferase | VF |
| FYK53_RS23430 (77224) | 77224..78135 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| FYK53_RS23435 (78146) | 78146..79366 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| FYK53_RS23440 (80073) | 80073..80687 | + | 615 | Protein_86 | VENN motif pre-toxin domain-containing protein | - |
| FYK53_RS23445 (80687) | 80687..81133 | - | 447 | Protein_87 | plasmid replication initiator RepA | - |
| FYK53_RS23450 (81126) | 81126..81200 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| FYK53_RS23455 (81436) | 81436..81693 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| FYK53_RS23460 (81977) | 81977..82126 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (82170) | 82170..82231 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82170) | 82170..82231 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82170) | 82170..82231 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82170) | 82170..82231 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| FYK53_RS23465 (82370) | 82370..82552 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| FYK53_RS23470 (82653) | 82653..83269 | + | 617 | Protein_92 | IS1-like element IS1A family transposase | - |
| FYK53_RS23475 (83307) | 83307..84878 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| FYK53_RS23480 (84898) | 84898..85245 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FYK53_RS23485 (85245) | 85245..85922 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FYK53_RS23490 (85977) | 85977..86066 | + | 90 | Protein_96 | IS1 family transposase | - |
| FYK53_RS23495 (86367) | 86367..86579 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| FYK53_RS23500 (86713) | 86713..87273 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| FYK53_RS23505 (87328) | 87328..88104 | - | 777 | WP_086625070.1 | conjugal transfer pilus acetylase TraX | - |
| FYK53_RS23510 (88043) | 88043..88213 | - | 171 | WP_086625069.1 | hypothetical protein | - |
| FYK53_RS23515 (88210) | 88210..88632 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| FYK53_RS23520 (88679) | 88679..89104 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| FYK53_RS23525 (89518) | 89518..90288 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| FYK53_RS23530 (90333) | 90333..90851 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| FYK53_RS23535 (90781) | 90781..91002 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FYK53_RS23540 (91003) | 91003..91686 | - | 684 | WP_032181561.1 | DNA methylase | - |
| FYK53_RS23545 (91763) | 91763..92074 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| FYK53_RS23550 (92071) | 92071..92973 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| FYK53_RS23555 (93711) | 93711..94682 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FYK53_RS23560 (94682) | 94682..95848 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| FYK53_RS23565 (96436) | 96436..97191 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| FYK53_RS23570 (97913) | 97913..98719 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| FYK53_RS23575 (98720) | 98720..99025 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FYK53_RS23580 (99027) | 99027..99245 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FYK53_RS23585 (99805) | 99805..100035 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| FYK53_RS23590 (100032) | 100032..100448 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FYK53_RS23595 (100523) | 100523..102088 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| FYK53_RS23600 (102073) | 102073..103095 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| FYK53_RS23610 (104572) | 104572..106773 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| FYK53_RS23615 (106799) | 106799..108132 | - | 1334 | Protein_121 | L-lysine N6-monooxygenase | VF |
| FYK53_RS23620 (108129) | 108129..109871 | - | 1743 | WP_112031956.1 | Aerobactin synthase | VF |
| FYK53_RS23625 (109871) | 109871..110818 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| FYK53_RS23630 (110819) | 110819..112543 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| FYK53_RS23635 (112679) | 112679..113872 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| FYK53_RS23640 (114252) | 114252..114632 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| FYK53_RS23645 (114973) | 114973..115386 | - | 414 | Protein_127 | phosphopyruvate hydratase | - |
| FYK53_RS23650 (115384) | 115384..115641 | + | 258 | Protein_128 | Tn3 family transposase | - |
| FYK53_RS23655 (115875) | 115875..116732 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| FYK53_RS23660 (116729) | 116729..117586 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| FYK53_RS23665 (117583) | 117583..118410 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| FYK53_RS23670 (118410) | 118410..119324 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| FYK53_RS23675 (119680) | 119680..120377 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| FYK53_RS23680 (120557) | 120557..121070 | - | 514 | Protein_134 | DUF4113 domain-containing protein | - |
| FYK53_RS23685 (121131) | 121131..121235 | - | 105 | Protein_135 | AAA family ATPase | - |
| FYK53_RS23690 (121237) | 121237..121560 | - | 324 | Protein_136 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|