MGE detailed information
MGE type: Conjugative plasmid MGE length: 105082 bp
Accession: NZ_CP043273 Location: 1..105082 Organism: Escherichia albertii strain RM9973 Replicon: plasmid p1RM9973
Accession: NZ_CP043273 Location: 1..105082 Organism: Escherichia albertii strain RM9973 Replicon: plasmid p1RM9973
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK17_RS22785 () | 188..553 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FYK17_RS22790 () | 568..879 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FYK17_RS22795 () | 901..1467 | + | 567 | WP_097749535.1 | type IV conjugative transfer system protein TraE | - |
| FYK17_RS22800 () | 1478..2182 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FYK17_RS22805 () | 2182..3609 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| FYK17_RS22810 () | 3599..4189 | + | 591 | WP_207610770.1 | conjugal transfer protein TraP | - |
| FYK17_RS22815 () | 4143..4373 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FYK17_RS22820 () | 4385..4636 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FYK17_RS22825 () | 4633..5148 | + | 516 | WP_062894219.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FYK17_RS22830 () | 5283..5504 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FYK17_RS22835 () | 5664..8291 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| FYK17_RS22840 () | 8288..8674 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| FYK17_RS22845 () | 8671..9303 | + | 633 | WP_033803053.1 | type-F conjugative transfer system protein TraW | - |
| FYK17_RS22850 () | 9300..10292 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FYK17_RS22855 () | 10301..10939 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FYK17_RS22860 () | 10936..12744 | + | 1809 | WP_207610771.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FYK17_RS22865 () | 12771..13028 | + | 258 | WP_122989651.1 | conjugal transfer protein TrbE | - |
| FYK17_RS22870 () | 13021..13764 | + | 744 | WP_207610772.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FYK17_RS22875 () | 13780..14127 | + | 348 | WP_207610773.1 | conjugal transfer protein TrbA | - |
| FYK17_RS22880 () | 14129..14443 | - | 315 | WP_207610774.1 | toxin ArtA | - |
| FYK17_RS22885 () | 14524..14805 | + | 282 | WP_079918527.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FYK17_RS22890 () | 14792..15337 | + | 546 | WP_207610775.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FYK17_RS22895 () | 15294..15608 | + | 315 | WP_207610784.1 | P-type conjugative transfer protein TrbJ | - |
| FYK17_RS22900 () | 15562..15987 | + | 426 | WP_207610776.1 | F-type conjugal transfer protein TrbF | - |
| FYK17_RS22905 () | 15974..17347 | + | 1374 | WP_097769617.1 | conjugal transfer protein TraH | - |
| FYK17_RS22910 () | 17344..20168 | + | 2825 | Protein_26 | conjugal transfer mating pair stabilization protein TraG | - |
| FYK17_RS22915 () | 20165..20674 | + | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| FYK17_RS22920 () | 20688..21419 | + | 732 | WP_000850423.1 | complement resistance protein TraT | - |
| FYK17_RS22925 () | 21671..23869 | + | 2199 | WP_086186337.1 | type IV conjugative transfer system coupling protein TraD | - |
| FYK17_RS22930 () | 23878..24276 | - | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FYK17_RS22935 () | 24276..24503 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FYK17_RS22940 () | 24585..29855 | + | 5271 | WP_207610777.1 | Multifunctional conjugation protein TraI | Relaxase |
| FYK17_RS22945 () | 29875..30621 | + | 747 | WP_000205759.1 | conjugal transfer pilus acetylase TraX | - |
| FYK17_RS22950 () | 30676..31236 | + | 561 | WP_001587438.1 | fertility inhibition protein FinO | - |
| FYK17_RS22955 () | 31372..31584 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| FYK17_RS22960 () | 31830..31904 | + | 75 | Protein_36 | endonuclease | - |
| - () | 32160..32221 | - | 62 | NuclAT_0 | - | - |
| - () | 32160..32221 | - | 62 | NuclAT_0 | - | - |
| - () | 32160..32221 | - | 62 | NuclAT_0 | - | - |
| - () | 32160..32221 | - | 62 | NuclAT_0 | - | - |
| FYK17_RS22965 () | 32208..32414 | + | 207 | WP_207610778.1 | Hok/Gef family protein | Toxin Detail |
| FYK17_RS22970 () | 32698..32955 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| FYK17_RS22975 () | 33187..33261 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| FYK17_RS22980 () | 33254..33736 | + | 483 | WP_001523473.1 | hypothetical protein | - |
| FYK17_RS22985 () | 33729..34586 | + | 858 | WP_207610779.1 | incFII family plasmid replication initiator RepA | - |
| FYK17_RS22990 () | 35659..35928 | + | 270 | WP_071940833.1 | hypothetical protein | Antitoxin Detail |
| FYK17_RS22995 () | 35925..36140 | + | 216 | WP_207610780.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FYK17_RS23000 () | 36085..36207 | + | 123 | WP_207610781.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FYK17_RS23005 () | 36314..37477 | + | 1164 | WP_207610782.1 | hypothetical protein | - |
| FYK17_RS23010 () | 37690..38271 | - | 582 | WP_001196199.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FYK17_RS23015 () | 38428..41466 | + | 3039 | WP_207610750.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| FYK17_RS23020 () | 41534..41803 | + | 270 | Protein_48 | IS21 family transposase ISEc12 | Transposase |
| FYK17_RS23025 () | 41818..42564 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| FYK17_RS23030 () | 42979..43737 | + | 759 | Protein_50 | transposase | - |
| FYK17_RS23035 () | 43854..44432 | - | 579 | WP_149454556.1 | hypothetical protein | VF |
| FYK17_RS23040 () | 45074..47197 | - | 2124 | WP_207610783.1 | ATP-binding cassette domain-containing protein | - |
| FYK17_RS23045 () | 47197..48417 | - | 1221 | WP_059257130.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FYK17_RS23050 () | 49027..49599 | - | 573 | WP_059242416.1 | hypothetical protein | - |
| FYK17_RS23055 () | 49769..50701 | - | 933 | WP_207610762.1 | IS630 family transposase ISSpu2 | Transposase |
| FYK17_RS23060 () | 50801..51778 | + | 978 | Protein_56 | IS21 family transposase IS21 | Transposase |
| FYK17_RS23065 () | 51882..54920 | - | 3039 | WP_207610750.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| FYK17_RS23070 () | 55077..55658 | + | 582 | WP_001196199.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FYK17_RS23075 () | 55719..56480 | + | 762 | WP_207610754.1 | IS21 family transposase IS21 | Transposase |
| FYK17_RS23080 () | 56614..56796 | - | 183 | Protein_60 | IS21 family transposase ISSso4 | Transposase |
| FYK17_RS23085 () | 56902..57081 | + | 180 | Protein_61 | hypothetical protein | - |
| FYK17_RS23090 () | 57298..57873 | + | 576 | WP_207610755.1 | S-fimbrial protein subunit SfaA | VF |
| FYK17_RS23095 () | 57943..58646 | + | 704 | Protein_63 | molecular chaperone | - |
| FYK17_RS23100 () | 58627..59067 | + | 441 | WP_207610756.1 | fimbria/pilus periplasmic chaperone | - |
| FYK17_RS23105 () | 59096..61603 | + | 2508 | WP_207610757.1 | putative outer membrane usher protein ElfC | VF |
| FYK17_RS23110 () | 61594..62292 | + | 699 | WP_059274241.1 | molecular chaperone | - |
| FYK17_RS23115 () | 62361..62882 | + | 522 | WP_072251124.1 | hypothetical protein | VF |
| FYK17_RS23120 () | 62924..64105 | + | 1182 | WP_207610758.1 | hypothetical protein | - |
| FYK17_RS23125 () | 64483..64749 | + | 267 | WP_059274238.1 | PerC family transcriptional regulator | - |
| FYK17_RS23130 () | 65447..66247 | - | 801 | WP_207610759.1 | helix-turn-helix domain-containing protein | - |
| FYK17_RS23140 () | 68206..68283 | - | 78 | Protein_72 | transcriptional regulator | - |
| FYK17_RS23145 () | 68397..68537 | + | 141 | WP_161527406.1 | transcriptional regulator | - |
| FYK17_RS23150 () | 68658..69398 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FYK17_RS23155 () | 69641..70618 | - | 978 | WP_059276356.1 | RepB family plasmid replication initiator protein | - |
| FYK17_RS23160 () | 71710..72876 | + | 1167 | WP_059278927.1 | plasmid-partitioning protein SopA | - |
| FYK17_RS23165 () | 72876..73847 | + | 972 | WP_207610760.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FYK17_RS23170 () | 74362..74613 | + | 252 | WP_001132891.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FYK17_RS23175 () | 74610..74897 | + | 288 | WP_059257247.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FYK17_RS23180 () | 75034..75776 | + | 743 | Protein_80 | transposase | - |
| FYK17_RS23185 () | 75909..76640 | + | 732 | Protein_81 | IS66 family transposase IS679 | Transposase |
| FYK17_RS23190 () | 76673..77320 | - | 648 | Protein_82 | IS91 family transposase ISSbo1 | Transposase |
| FYK17_RS23195 () | 77330..77518 | - | 189 | Protein_83 | hypothetical protein | - |
| FYK17_RS23200 () | 77773..85572 | - | 7800 | WP_207610761.1 | DUF3491 domain-containing protein | - |
| FYK17_RS23205 () | 85908..87069 | + | 1162 | Protein_85 | IS3 family transposase | - |
| FYK17_RS23210 () | 87102..87290 | - | 189 | Protein_86 | ISL3 family transposase | - |
| FYK17_RS23215 () | 87387..87530 | - | 144 | Protein_87 | IS3 family transposase ISKpn38 | Transposase |
| FYK17_RS23220 () | 87808..88740 | - | 933 | WP_207610762.1 | IS630 family transposase ISSpu2 | Transposase |
| FYK17_RS23225 () | 88878..88994 | - | 117 | Protein_89 | IS3 family transposase | - |
| FYK17_RS23230 () | 89053..90666 | - | 1614 | WP_207610763.1 | IS66 family transposase ISEc43 | Transposase |
| FYK17_RS23235 () | 90697..91047 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| FYK17_RS23240 () | 91044..91469 | - | 426 | Protein_92 | IS66 family transposase ISEc23 | Transposase |
| FYK17_RS23245 () | 91514..91831 | - | 318 | Protein_93 | reverse transcriptase N-terminal domain-containing protein | - |
| FYK17_RS23250 () | 92411..93064 | + | 654 | WP_207610764.1 | DNA methylase | - |
| FYK17_RS23255 () | 93065..93285 | + | 221 | Protein_95 | hypothetical protein | - |
| FYK17_RS23260 () | 93298..93732 | + | 435 | WP_000274472.1 | DUF1380 family protein | - |
| FYK17_RS23265 () | 93783..94553 | + | 771 | WP_207610765.1 | hypothetical protein | - |
| FYK17_RS23270 () | 95093..95395 | + | 303 | WP_075207376.1 | antirestriction protein | - |
| FYK17_RS23275 () | 95442..95864 | + | 423 | WP_021560301.1 | DUF1380 family protein | - |
| FYK17_RS23280 () | 95861..96052 | + | 192 | WP_207610766.1 | hypothetical protein | - |
| FYK17_RS23285 () | 96031..96400 | - | 370 | Protein_101 | hypothetical protein | - |
| FYK17_RS23290 () | 96912..97142 | + | 231 | WP_207610767.1 | hypothetical protein | - |
| FYK17_RS23295 () | 97194..98555 | + | 1362 | WP_207610768.1 | DUF3560 domain-containing protein | - |
| FYK17_RS23300 () | 98601..99164 | + | 564 | WP_021548773.1 | class I SAM-dependent methyltransferase | - |
| FYK17_RS23305 () | 99954..100958 | - | 1005 | WP_207610785.1 | IS110 family transposase IS1663 | Transposase |
| FYK17_RS23310 () | 101209..101496 | + | 288 | WP_085457081.1 | hypothetical protein | - |
| FYK17_RS23315 () | 101615..102436 | + | 822 | WP_032342235.1 | DUF945 domain-containing protein | - |
| FYK17_RS23320 () | 102732..103334 | - | 603 | WP_207610769.1 | hypothetical protein | VF |
| FYK17_RS23325 () | 103656..104039 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FYK17_RS23330 () | 104229..104915 | + | 687 | WP_000332492.1 | PAS domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|