MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP043211 Location: 1385204..1417084 Organism: Escherichia coli O16:H48 strain PG20180050 Replicon: chromosome
Accession: NZ_CP043211 Location: 1385204..1417084 Organism: Escherichia coli O16:H48 strain PG20180050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA05_RS06630 () | 1381388..1382656 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA05_RS06635 () | 1382676..1383653 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA05_RS06640 () | 1383989..1386241 | - | 2253 | Protein_1281 | hypothetical protein | - |
| FYA05_RS06655 () | 1387627..1389000 | + | 1374 | Protein_1282 | DUF5507 domain-containing protein | - |
| FYA05_RS06660 () | 1389364..1389573 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| FYA05_RS06665 () | 1389728..1389847 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA05_RS06670 () | 1389912..1394492 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| FYA05_RS06675 () | 1394856..1395185 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA05_RS06680 () | 1395206..1395523 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA05_RS06685 () | 1395561..1395761 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA05_RS06690 () | 1395770..1396252 | - | 483 | WP_001407480.1 | RadC family protein | - |
| FYA05_RS06695 () | 1396261..1396719 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA05_RS06700 () | 1396822..1397045 | - | 224 | Protein_1291 | DUF905 domain-containing protein | - |
| FYA05_RS06705 () | 1397617..1399320 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA05_RS06710 () | 1399462..1400471 | + | 1010 | Protein_1293 | arsenic transporter | - |
| FYA05_RS06715 () | 1400484..1400798 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA05_RS06720 () | 1401023..1401490 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA05_RS06725 () | 1401514..1401957 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA05_RS06730 () | 1401957..1402193 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA05_RS06735 () | 1402234..1402935 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA05_RS06740 () | 1403152..1403973 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA05_RS06745 () | 1404065..1404928 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA05_RS06750 () | 1405283..1405654 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA05_RS06755 () | 1405647..1406720 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA05_RS06760 () | 1406862..1407125 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA05_RS06765 () | 1407485..1409101 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA05_RS06770 () | 1409098..1411287 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA05_RS06775 () | 1411465..1412091 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA05_RS06780 () | 1412244..1413653 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA05_RS06785 () | 1413782..1413994 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA05_RS06790 () | 1414038..1414994 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA05_RS06795 () | 1415238..1416479 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| FYA05_RS06805 () | 1417260..1417742 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA05_RS06810 () | 1417913..1418350 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA05_RS06815 () | 1418340..1418630 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA05_RS06820 () | 1418692..1419033 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| FYA05_RS06825 () | 1419182..1420843 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| FYA05_RS06830 () | 1420929..1421807 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |