MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP043195 Location: 1388293..1420173 Organism: Escherichia coli O16:H48 strain PG20180062 Replicon: chromosome
Accession: NZ_CP043195 Location: 1388293..1420173 Organism: Escherichia coli O16:H48 strain PG20180062 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA13_RS06635 () | 1384477..1385745 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA13_RS06640 () | 1385765..1386742 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA13_RS06645 () | 1387078..1389330 | - | 2253 | Protein_1281 | hypothetical protein | - |
| FYA13_RS06660 () | 1390716..1392089 | + | 1374 | Protein_1282 | DUF5507 domain-containing protein | - |
| FYA13_RS06665 () | 1392453..1392662 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| FYA13_RS06670 () | 1392817..1392936 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA13_RS06675 () | 1393001..1397581 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| FYA13_RS06680 () | 1397945..1398274 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA13_RS06685 () | 1398295..1398612 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA13_RS06690 () | 1398650..1398850 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA13_RS06695 () | 1398859..1399341 | - | 483 | WP_001407480.1 | RadC family protein | - |
| FYA13_RS06700 () | 1399350..1399808 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA13_RS06705 () | 1399911..1400134 | - | 224 | Protein_1291 | DUF905 domain-containing protein | - |
| FYA13_RS06710 () | 1400706..1402409 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA13_RS06715 () | 1402551..1403560 | + | 1010 | Protein_1293 | arsenic transporter | - |
| FYA13_RS06720 () | 1403573..1403887 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA13_RS06725 () | 1404112..1404579 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA13_RS06730 () | 1404603..1405046 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA13_RS06735 () | 1405046..1405282 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA13_RS06740 () | 1405323..1406024 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA13_RS06745 () | 1406241..1407062 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA13_RS06750 () | 1407154..1408017 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA13_RS06755 () | 1408372..1408743 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA13_RS06760 () | 1408736..1409809 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA13_RS06765 () | 1409951..1410214 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA13_RS06770 () | 1410574..1412190 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA13_RS06775 () | 1412187..1414376 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA13_RS06780 () | 1414554..1415180 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA13_RS06785 () | 1415333..1416742 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA13_RS06790 () | 1416871..1417083 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA13_RS06795 () | 1417127..1418083 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA13_RS06800 () | 1418327..1419568 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| FYA13_RS06810 () | 1420349..1420831 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA13_RS06815 () | 1421002..1421439 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA13_RS06820 () | 1421429..1421719 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA13_RS06825 () | 1421781..1422122 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| FYA13_RS06830 () | 1422271..1423932 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| FYA13_RS06835 () | 1424018..1424896 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |