MGE detailed information
MGE type: Genomic_island MGE length: 41886 bp
Accession: NZ_CP043185 Location: 1482765..1524650 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Accession: NZ_CP043185 Location: 1482765..1524650 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA18_RS07210 () | 1478401..1480062 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| FYA18_RS07215 () | 1480211..1480552 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| FYA18_RS07220 () | 1480614..1480904 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA18_RS07225 () | 1480894..1481331 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA18_RS07230 () | 1481502..1481984 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA18_RS07240 () | 1482765..1484006 | + | 1242 | WP_000101723.1 | NAD(P)H dehydrogenase (quinone) ; Integrase | Integrase |
| FYA18_RS07245 () | 1484250..1485206 | - | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA18_RS07250 () | 1485250..1485462 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA18_RS07255 () | 1485591..1487000 | + | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA18_RS07260 () | 1487153..1487779 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA18_RS07265 () | 1487957..1490146 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA18_RS07270 () | 1490143..1491759 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA18_RS07275 () | 1492119..1492382 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA18_RS07280 () | 1492524..1493597 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA18_RS07285 () | 1493590..1493961 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA18_RS07290 () | 1494316..1495179 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA18_RS07295 () | 1495271..1496092 | + | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA18_RS07300 () | 1496309..1497010 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA18_RS07305 () | 1497051..1497287 | + | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA18_RS07310 () | 1497287..1497730 | + | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA18_RS07315 () | 1497754..1498221 | + | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA18_RS07320 () | 1498446..1498760 | - | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA18_RS07325 () | 1498773..1499782 | - | 1010 | Protein_1433 | arsenic transporter | - |
| FYA18_RS07330 () | 1499924..1501627 | + | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA18_RS07335 () | 1502199..1502422 | + | 224 | Protein_1435 | DUF905 domain-containing protein | - |
| FYA18_RS07340 () | 1502525..1502983 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA18_RS07345 () | 1502992..1503474 | + | 483 | WP_001407480.1 | RadC family protein | - |
| FYA18_RS07350 () | 1503483..1503683 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA18_RS07355 () | 1503721..1504038 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA18_RS07360 () | 1504059..1504388 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA18_RS07365 () | 1504752..1509332 | - | 4581 | WP_010723187.1 | hypothetical protein | VF |
| FYA18_RS07370 () | 1509397..1509516 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA18_RS07375 () | 1509671..1509889 | - | 219 | WP_071524906.1 | recombinase family protein | - |
| FYA18_RS07380 () | 1510244..1511617 | - | 1374 | Protein_1444 | DUF5507 domain-containing protein | - |
| FYA18_RS22635 () | 1513003..1515255 | + | 2253 | Protein_1445 | hypothetical protein | - |
| FYA18_RS07400 () | 1515591..1516568 | + | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA18_RS07405 () | 1516588..1517856 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA18_RS07410 () | 1517879..1519327 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| FYA18_RS07415 () | 1519341..1520621 | + | 1281 | WP_001087611.1 | Acetylornithine/succinyldiaminopimelate aminotransferase | VF |
| FYA18_RS07420 () | 1520859..1522259 | + | 1401 | WP_001295173.1 | GABA permease | - |
| FYA18_RS07425 () | 1522280..1522942 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| FYA18_RS07430 () | 1522943..1523392 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| FYA18_RS07435 () | 1523476..1523634 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| FYA18_RS07440 () | 1523817..1524116 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| FYA18_RS07445 () | 1524126..1524650 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| FYA18_RS07450 () | 1524697..1525101 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| FYA18_RS07455 () | 1525770..1526219 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| FYA18_RS07460 () | 1526256..1526600 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| FYA18_RS07465 () | 1526752..1527081 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| FYA18_RS07470 () | 1527329..1527574 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| FYA18_RS07475 () | 1527571..1527981 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.007 |