MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP043183 Location: 1100228..1132108 Organism: Escherichia coli O16:H48 strain PG20180172 Replicon: chromosome
Accession: NZ_CP043183 Location: 1100228..1132108 Organism: Escherichia coli O16:H48 strain PG20180172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA19_RS05300 () | 1096412..1097680 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| FYA19_RS05305 () | 1097700..1098677 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| FYA19_RS05310 () | 1099013..1101265 | - | 2253 | Protein_1034 | hypothetical protein | - |
| FYA19_RS05325 () | 1102651..1104024 | + | 1374 | Protein_1035 | DUF5507 domain-containing protein | - |
| FYA19_RS05330 () | 1104388..1104597 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| FYA19_RS05335 () | 1104752..1104871 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| FYA19_RS05340 () | 1104936..1109516 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| FYA19_RS05345 () | 1109880..1110209 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| FYA19_RS05350 () | 1110230..1110547 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FYA19_RS05355 () | 1110585..1110785 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| FYA19_RS05360 () | 1110794..1111276 | - | 483 | WP_001407480.1 | RadC family protein | - |
| FYA19_RS05365 () | 1111285..1111743 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| FYA19_RS05370 () | 1111846..1112069 | - | 224 | Protein_1044 | DUF905 domain-containing protein | - |
| FYA19_RS05375 () | 1112641..1114344 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| FYA19_RS05380 () | 1114486..1115495 | + | 1010 | Protein_1046 | arsenic transporter | - |
| FYA19_RS05385 () | 1115508..1115822 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| FYA19_RS05390 () | 1116047..1116514 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| FYA19_RS05395 () | 1116538..1116981 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| FYA19_RS05400 () | 1116981..1117217 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| FYA19_RS05405 () | 1117258..1117959 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| FYA19_RS05410 () | 1118176..1118997 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| FYA19_RS05415 () | 1119089..1119952 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| FYA19_RS05420 () | 1120307..1120678 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| FYA19_RS05425 () | 1120671..1121744 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| FYA19_RS05430 () | 1121886..1122149 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| FYA19_RS05435 () | 1122509..1124125 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| FYA19_RS05440 () | 1124122..1126311 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| FYA19_RS05445 () | 1126489..1127115 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| FYA19_RS05450 () | 1127268..1128677 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| FYA19_RS05455 () | 1128806..1129018 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| FYA19_RS05460 () | 1129062..1130018 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| FYA19_RS05465 () | 1130262..1131503 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| FYA19_RS05475 () | 1132284..1132766 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| FYA19_RS05480 () | 1132937..1133374 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| FYA19_RS05485 () | 1133364..1133654 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| FYA19_RS05490 () | 1133716..1134057 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| FYA19_RS05495 () | 1134206..1135867 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| FYA19_RS05500 () | 1135953..1136831 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |