MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP042865 Location: 1097784..1129664 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Accession: NZ_CP042865 Location: 1097784..1129664 Organism: Escherichia coli strain ATCC BAA-196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAA196NC_RS05285 () | 1093968..1095236 | - | 1269 | Protein_1029 | L-2-hydroxyglutarate oxidase | - |
| BAA196NC_RS05290 () | 1095256..1096233 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| BAA196NC_RS05295 () | 1096569..1098821 | - | 2253 | Protein_1031 | hypothetical protein | - |
| BAA196NC_RS05310 () | 1100207..1101580 | + | 1374 | Protein_1032 | DUF5507 domain-containing protein | - |
| BAA196NC_RS05315 () | 1101944..1102153 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| BAA196NC_RS05320 () | 1102308..1102427 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| BAA196NC_RS05325 () | 1102492..1107072 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| BAA196NC_RS05330 () | 1107436..1107765 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| BAA196NC_RS05335 () | 1107786..1108103 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BAA196NC_RS05340 () | 1108141..1108341 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| BAA196NC_RS05345 () | 1108350..1108832 | - | 483 | WP_001407480.1 | RadC family protein | - |
| BAA196NC_RS05350 () | 1108841..1109299 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| BAA196NC_RS05355 () | 1109402..1109625 | - | 224 | Protein_1041 | DUF905 domain-containing protein | - |
| BAA196NC_RS05360 () | 1110197..1111900 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| BAA196NC_RS05365 () | 1112042..1113051 | + | 1010 | Protein_1043 | arsenic transporter | - |
| BAA196NC_RS05370 () | 1113064..1113378 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| BAA196NC_RS05375 () | 1113603..1114070 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| BAA196NC_RS05380 () | 1114094..1114537 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| BAA196NC_RS05385 () | 1114537..1114773 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| BAA196NC_RS05390 () | 1114814..1115515 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| BAA196NC_RS05395 () | 1115732..1116553 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| BAA196NC_RS05400 () | 1116645..1117508 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| BAA196NC_RS05405 () | 1117863..1118234 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| BAA196NC_RS05410 () | 1118227..1119300 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| BAA196NC_RS05415 () | 1119442..1119705 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| BAA196NC_RS05420 () | 1120065..1121681 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| BAA196NC_RS05425 () | 1121678..1123867 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| BAA196NC_RS05430 () | 1124045..1124671 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| BAA196NC_RS05435 () | 1124824..1126233 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| BAA196NC_RS05440 () | 1126362..1126574 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| BAA196NC_RS05445 () | 1126618..1127574 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| BAA196NC_RS05450 () | 1127818..1129059 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| BAA196NC_RS05460 () | 1129840..1130322 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| BAA196NC_RS05465 () | 1130493..1130930 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| BAA196NC_RS05470 () | 1130920..1131210 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| BAA196NC_RS05475 () | 1131272..1131613 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| BAA196NC_RS05480 () | 1131762..1133423 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| BAA196NC_RS05485 () | 1133509..1134387 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |