MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP042846 Location: 2111495..2133169 Organism: Escherichia coli strain JME64 Replicon: chromosome
Accession: NZ_CP042846 Location: 2111495..2133169 Organism: Escherichia coli strain JME64 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVE20_RS10260 () | 2107545..2108528 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FVE20_RS10265 () | 2109006..2110379 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| FVE20_RS10270 () | 2110508..2111443 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FVE20_RS10275 () | 2111495..2112730 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| FVE20_RS10280 () | 2112732..2112947 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| FVE20_RS10285 () | 2113026..2113235 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2113051..2113229 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113051..2113229 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113051..2113229 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2113051..2113229 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FVE20_RS10290 () | 2113228..2113422 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FVE20_RS10295 () | 2113479..2114288 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| FVE20_RS10300 () | 2114281..2116881 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| FVE20_RS10305 () | 2116983..2117258 | - | 276 | WP_000632297.1 | protein RacC | - |
| FVE20_RS10310 () | 2117333..2117503 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| FVE20_RS10315 () | 2117503..2117724 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| FVE20_RS10320 () | 2118166..2118654 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| FVE20_RS10325 () | 2118651..2118806 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| FVE20_RS10335 () | 2119260..2119736 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| FVE20_RS10340 () | 2119860..2120156 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| FVE20_RS10345 () | 2120179..2120601 | + | 423 | WP_000693797.1 | phage protein | - |
| FVE20_RS10350 () | 2120614..2121471 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| FVE20_RS10355 () | 2121478..2122224 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| FVE20_RS10360 () | 2122247..2122699 | + | 453 | Protein_1984 | DUF1627 domain-containing protein | - |
| FVE20_RS10365 () | 2122895..2123080 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| FVE20_RS10370 () | 2123277..2124734 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| FVE20_RS10375 () | 2124872..2125135 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FVE20_RS10380 () | 2125116..2125475 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| FVE20_RS10390 () | 2125949..2126881 | + | 933 | Protein_1989 | phage tail length tape measure family protein | - |
| FVE20_RS10395 () | 2126884..2127099 | + | 216 | Protein_1990 | Ail/Lom family outer membrane beta-barrel protein | - |
| FVE20_RS10400 () | 2127241..2128221 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| FVE20_RS10405 () | 2128291..2128479 | + | 189 | Protein_1992 | Ail/Lom family outer membrane beta-barrel protein | - |
| FVE20_RS10410 () | 2128544..2131906 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FVE20_RS10415 () | 2131906..2132481 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| FVE20_RS10420 () | 2132579..2133169 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FVE20_RS10425 () | 2133486..2133719 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| FVE20_RS10430 () | 2133788..2133901 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FVE20_RS10435 () | 2134680..2135114 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| FVE20_RS10440 () | 2135255..2136388 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |