MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP042845 Location: 2116376..2138050 Organism: Escherichia coli strain JME65 Replicon: chromosome
Accession: NZ_CP042845 Location: 2116376..2138050 Organism: Escherichia coli strain JME65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVE21_RS10285 () | 2112426..2113409 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FVE21_RS10290 () | 2113887..2115260 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| FVE21_RS10295 () | 2115389..2116324 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FVE21_RS10300 () | 2116376..2117611 | - | 1236 | WP_000040852.1 | site-specific integrase | - |
| FVE21_RS10305 () | 2117613..2117828 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| FVE21_RS10310 () | 2117907..2118116 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2117932..2118110 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2117932..2118110 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2117932..2118110 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2117932..2118110 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FVE21_RS10315 () | 2118109..2118303 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FVE21_RS10320 () | 2118360..2119169 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| FVE21_RS10325 () | 2119162..2121762 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| FVE21_RS10330 () | 2121864..2122139 | - | 276 | WP_000632297.1 | protein RacC | - |
| FVE21_RS10335 () | 2122214..2122384 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| FVE21_RS10340 () | 2122384..2122605 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| FVE21_RS10345 () | 2123047..2123535 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| FVE21_RS10350 () | 2123532..2123687 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| FVE21_RS10360 () | 2124141..2124617 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| FVE21_RS10365 () | 2124741..2125037 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| FVE21_RS10370 () | 2125060..2125482 | + | 423 | WP_000693797.1 | phage protein | - |
| FVE21_RS10375 () | 2125495..2126352 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| FVE21_RS10380 () | 2126359..2127105 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| FVE21_RS10385 () | 2127128..2127580 | + | 453 | Protein_1989 | DUF1627 domain-containing protein | - |
| FVE21_RS10390 () | 2127776..2127961 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| FVE21_RS10395 () | 2128158..2129615 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| FVE21_RS10400 () | 2129753..2130016 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FVE21_RS10405 () | 2129997..2130356 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| FVE21_RS10415 () | 2130830..2131762 | + | 933 | Protein_1994 | phage tail length tape measure family protein | - |
| FVE21_RS10420 () | 2131765..2131980 | + | 216 | Protein_1995 | Ail/Lom family outer membrane beta-barrel protein | - |
| FVE21_RS10425 () | 2132122..2133102 | - | 981 | WP_000019448.1 | IS5-like element ISKpn26 family transposase | - |
| FVE21_RS10430 () | 2133172..2133360 | + | 189 | Protein_1997 | Ail/Lom family outer membrane beta-barrel protein | - |
| FVE21_RS10435 () | 2133425..2136787 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FVE21_RS10440 () | 2136787..2137362 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| FVE21_RS10445 () | 2137460..2138050 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| FVE21_RS10450 () | 2138367..2138600 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| FVE21_RS10455 () | 2138669..2138782 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FVE21_RS10460 () | 2139561..2139995 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| FVE21_RS10465 () | 2140136..2141269 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |