MGE detailed information

MGE type: Conjugative plasmid        MGE length: 159610 bp
Accession: NZ_CP042337        Location: 1..159610         Organism: Escherichia coli strain GZ04-0086       Replicon: plasmid pCTXM-GZ04


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3B71_RS25565 () 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
E3B71_RS25570 () 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
E3B71_RS25575 () 2109..3329 + 1221 WP_000343760.1 ISL3 family transposase ISKox3 Transposase
E3B71_RS25580 () 3448..3636 - 189 WP_001309252.1 hypothetical protein -
E3B71_RS25585 () 4003..5172 + 1170 WP_001072358.1 hypothetical protein -
E3B71_RS25590 () 5398..5573 - 176 Protein_5 IS3 family transposase -
E3B71_RS25595 () 6019..6291 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
E3B71_RS25600 () 6816..7252 - 437 Protein_7 IS3 family transposase IS2 Transposase
E3B71_RS25605 () 7534..9504 + 1971 WP_001496335.1 Hemin receptor VF
E3B71_RS25610 () 9511..10302 + 792 WP_000977394.1 DUF4198 domain-containing protein -
E3B71_RS25615 () 10365..10973 - 609 Protein_10 IS66 family transposase ISEc22 Transposase
E3B71_RS25620 () 11041..11823 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
E3B71_RS25625 () 11820..12842 - 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
E3B71_RS25630 () 12928..13873 - 946 Protein_13 IS66 family transposase ISEc8 Transposase
E3B71_RS25635 () 13922..14296 - 375 WP_024193849.1 IS66 family transposase ISKpn24 Transposase
E3B71_RS25640 () 14321..15025 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
E3B71_RS25645 () 15078..15557 + 480 Protein_16 Tn3 family transposase TnpR_ISSba14 Transposase
E3B71_RS25650 () 15742..16299 + 558 WP_000108589.1 OsmC family protein -
E3B71_RS25655 () 16441..17022 + 582 WP_000210409.1 HTH-type transcriptional repressor NemR VF
E3B71_RS25660 () 17027..17365 + 339 WP_000888080.1 carboxymuconolactone decarboxylase family protein -
E3B71_RS25665 () 17395..17724 - 330 WP_002431133.1 thioredoxin family protein -
E3B71_RS25670 () 17938..19044 + 1107 WP_000039982.1 alkene reductase -
E3B71_RS25675 () 19110..19811 + 702 WP_001194013.1 DsbA family oxidoreductase -
E3B71_RS25680 () 19877..20650 + 774 WP_032152933.1 SDR family oxidoreductase -
E3B71_RS25685 () 20836..22059 - 1224 WP_000872613.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
E3B71_RS25690 () 22190..23062 - 873 WP_000090196.1 DMT family transporter -
E3B71_RS25695 () 23304..24056 + 753 WP_000734115.1 alpha/beta hydrolase -
E3B71_RS25700 () 24083..24396 + 314 Protein_27 Tn3 family transposase -
E3B71_RS25705 () 24496..25500 + 1005 WP_021546935.1 IS110 family transposase IS4321R Transposase
E3B71_RS25710 () 25778..25882 + 105 Protein_29 IS5/IS1182 family transposase -
E3B71_RS25715 () 26032..26664 - 633 Protein_30 histidine-type phosphatase -
E3B71_RS25720 () 26786..27271 - 486 WP_000874189.1 hypothetical protein -
E3B71_RS25725 () 27296..27781 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
E3B71_RS25730 () 27768..28463 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
E3B71_RS25735 () 28468..29598 - 1131 WP_000729219.1 ABC transporter permease -
E3B71_RS25740 () 29588..30871 - 1284 WP_000964653.1 ABC transporter permease -
E3B71_RS25745 () 30874..32253 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
E3B71_RS25750 () 32357..32884 - 528 WP_000178050.1 iron transporter -
E3B71_RS25755 () 32925..34811 - 1887 WP_000118029.1 FTR1 family iron permease -
E3B71_RS25765 () 35158..35973 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
E3B71_RS25770 () 36156..36662 - 507 WP_000949452.1 protein disulfide oxidoreductase -
E3B71_RS25775 () 36652..36810 - 159 WP_000449408.1 DsbA family protein -
E3B71_RS27770 () 36960..37073 - 114 Protein_42 IS6 family transposase -
E3B71_RS25790 () 37273..37970 + 698 Protein_43 IS1 family transposase IS1G Transposase
E3B71_RS25795 () 37985..39148 + 1164 Protein_44 IS4 family transposase IS10R Transposase
E3B71_RS25800 () 39158..39529 - 372 WP_035689358.1 Transposon Tn10 TetD protein VF
E3B71_RS25805 () 39662..40255 + 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
E3B71_RS25810 () 40368..41573 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
E3B71_RS25815 () 41655..42278 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
E3B71_RS25820 () 42256..42942 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
E3B71_RS25825 () 42950..43312 - 363 WP_135804982.1 amino acid-binding protein -
E3B71_RS25830 () 43309..44006 - 698 Protein_51 IS1 family transposase IS1R Transposase
E3B71_RS25835 () 44195..44899 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
E3B71_RS25845 () 44979..45854 + 876 WP_000239590.1 Beta-lactamase CTX-M-1 ARG
E3B71_RS25850 () 45901..46233 - 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
E3B71_RS25855 () 46247..48490 + 2244 Protein_55 Tn3 family transposase TnpA_Tn3 Transposase
E3B71_RS25860 () 48555..49259 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
E3B71_RS25865 () 49313..50361 - 1049 Protein_57 IS3 family transposase ISKpn11 Transposase
E3B71_RS25870 () 50453..50995 - 543 WP_002063889.1 AAA family ATPase -
E3B71_RS25875 () 51008..51868 - 861 WP_000557452.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
E3B71_RS25880 () 51975..52679 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
E3B71_RS25885 () 52733..53173 - 441 Protein_61 CatB-related O-acetyltransferase -
E3B71_RS25890 () 53311..54141 - 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
E3B71_RS25895 () 54272..54826 - 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
E3B71_RS25900 () 54970..55674 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
E3B71_RS25905 () 55740..56252 + 513 Protein_65 Tn3 family transposase TnpA_TnAs1 Transposase
E3B71_RS25910 () 56276..56881 - 606 WP_000509965.1 Tn3 family transposase TnpR_Tn5403 Transposase
E3B71_RS25915 () 56976..59873 + 2898 WP_001553819.1 Tn3 family transposase TnpA_Tn5403 Transposase
E3B71_RS25920 () 60010..60411 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
E3B71_RS25925 () 60344..60601 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
E3B71_RS25930 () 60694..61347 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
E3B71_RS25940 () 62286..63143 - 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
E3B71_RS25945 () 63136..63210 - 75 WP_001365705.1 RepA leader peptide Tap -
E3B71_RS25955 () 63445..63702 - 258 WP_000083821.1 replication regulatory protein RepA -
E3B71_RS25965 () 64107..65129 + 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
E3B71_RS25970 () 65601..65954 + 354 WP_000005489.1 hypothetical protein -
E3B71_RS25975 () 66367..66945 - 579 WP_032152936.1 DUF2726 domain-containing protein -
E3B71_RS25980 () 66978..67675 + 698 Protein_77 IS1 family transposase IS1S Transposase
E3B71_RS25985 () 67784..68146 + 363 WP_059330006.1 IS66 family insertion sequence hypothetical protein -
E3B71_RS25990 () 68143..68493 + 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
E3B71_RS25995 () 68524..68745 + 222 WP_000080227.1 IS66 family transposase ISEc43 Transposase
E3B71_RS26000 () 68697..69038 + 342 Protein_81 transposase -
E3B71_RS26005 () 69102..69581 - 480 WP_001496175.1 ArgR family transcriptional regulator -
E3B71_RS26010 () 69662..71065 - 1404 WP_000514417.1 YfcC family protein -
E3B71_RS26015 () 71113..72117 - 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
E3B71_RS26020 () 72202..73113 - 912 WP_000440183.1 carbamate kinase -
E3B71_RS26025 () 73124..74344 - 1221 WP_000410951.1 arginine deiminase -
E3B71_RS26030 () 75237..75719 + 483 Protein_87 VENN motif pre-toxin domain-containing protein -
E3B71_RS26035 () 75665..76111 - 447 Protein_88 incFII family plasmid replication initiator RepA -
E3B71_RS26040 () 76104..76178 - 75 WP_032336874.1 RepA leader peptide Tap -
E3B71_RS26050 () 76414..76671 - 258 WP_000083833.1 replication regulatory protein RepA -
E3B71_RS26055 () 76955..77161 - 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 77148..77209 + 62 NuclAT_2 - Antitoxin Detail
- () 77148..77209 + 62 NuclAT_2 - Antitoxin Detail
- () 77148..77209 + 62 NuclAT_2 - Antitoxin Detail
- () 77148..77209 + 62 NuclAT_2 - Antitoxin Detail
E3B71_RS26065 () 77348..77530 - 183 WP_000968309.1 hypothetical protein -
E3B71_RS26070 () 77631..78247 + 617 Protein_93 IS1 family transposase IS1G Transposase
E3B71_RS26075 () 78285..79856 - 1572 WP_023149734.1 IS66 family transposase ISCro1 Transposase
E3B71_RS26080 () 79876..80223 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
E3B71_RS26085 () 80223..80900 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
E3B71_RS27660 () 80955..81044 + 90 Protein_97 IS1 family transposase -
E3B71_RS26100 () 81345..81557 - 213 WP_005012601.1 hypothetical protein -
E3B71_RS26105 () 81691..82251 - 561 WP_000139363.1 fertility inhibition protein FinO -
E3B71_RS26110 () 82306..83052 - 747 WP_135804981.1 conjugal transfer pilus acetylase TraX -
E3B71_RS26115 () 83072..88192 - 5121 WP_013362805.1 Multifunctional conjugation protein TraI Relaxase
E3B71_RS26120 () 88192..90381 - 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -
E3B71_RS26130 () 90633..91364 - 732 WP_000850424.1 complement resistance protein TraT -
E3B71_RS26135 () 91378..91887 - 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
E3B71_RS26140 () 91884..94709 - 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
E3B71_RS26145 () 94706..96079 - 1374 WP_021518370.1 conjugal transfer protein TraH -
E3B71_RS26150 () 96066..96458 - 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
E3B71_RS26155 () 96412..96786 - 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
E3B71_RS26160 () 96716..97270 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
E3B71_RS26165 () 97257..97541 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
E3B71_RS26170 () 97622..97957 + 336 WP_000415571.1 hypothetical protein -
E3B71_RS26175 () 97938..98279 - 342 WP_000556794.1 conjugal transfer protein TrbA -
E3B71_RS26180 () 98293..99036 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
E3B71_RS26185 () 99029..99286 - 258 WP_000864312.1 conjugal transfer protein TrbE -
E3B71_RS26190 () 99313..101121 - 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
E3B71_RS26195 () 101118..101756 - 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
E3B71_RS26200 () 101765..102757 - 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
E3B71_RS26205 () 102754..103386 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
E3B71_RS26210 () 103383..103769 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
E3B71_RS26215 () 103766..106393 - 2628 WP_001064245.1 type IV secretion system protein TraC -
E3B71_RS26220 () 106553..106774 - 222 WP_001278689.1 conjugal transfer protein TraR -
E3B71_RS26225 () 106909..107424 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
E3B71_RS26230 () 107421..107672 - 252 WP_001038342.1 conjugal transfer protein TrbG -
E3B71_RS26235 () 107684..107914 - 231 WP_001352845.1 conjugal transfer protein TrbD -
E3B71_RS26240 () 107868..108458 - 591 WP_000002787.1 conjugal transfer protein TraP -
E3B71_RS26245 () 108448..109875 - 1428 WP_000146685.1 conjugal transfer protein TraB -
E3B71_RS26250 () 109875..110579 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
E3B71_RS26255 () 110590..111156 - 567 WP_021514868.1 type IV conjugative transfer system protein TraE -
E3B71_RS26260 () 111178..111489 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
E3B71_RS26265 () 111504..111869 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
E3B71_RS26270 () 111902..112297 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
E3B71_RS26275 () 112396..113085 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
E3B71_RS26280 () 113272..113655 - 384 WP_001151524.1 relaxosome protein TraM -
E3B71_RS26285 () 113976..114578 + 603 WP_013362798.1 hypothetical protein VF
E3B71_RS26290 () 114875..115696 - 822 WP_001234426.1 DUF945 domain-containing protein -
E3B71_RS26295 () 115814..116101 - 288 WP_000107535.1 hypothetical protein -
E3B71_RS26310 () 117022..117180 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 117224..117255 - 32 NuclAT_1 - Antitoxin Detail
- () 117224..117255 - 32 NuclAT_1 - Antitoxin Detail
- () 117224..117255 - 32 NuclAT_1 - Antitoxin Detail
- () 117224..117255 - 32 NuclAT_1 - Antitoxin Detail
- () 118697..118894 - 198 NuclAT_0 - -
- () 118697..118894 - 198 NuclAT_0 - -
- () 118697..118894 - 198 NuclAT_0 - -
- () 118697..118894 - 198 NuclAT_0 - -
E3B71_RS27665 () 118706..118894 + 189 WP_001299721.1 hypothetical protein -
E3B71_RS26320 () 118906..119625 - 720 WP_001276238.1 plasmid SOS inhibition protein A -
E3B71_RS26325 () 119622..120056 - 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
E3B71_RS26330 () 120111..120308 - 198 Protein_142 hypothetical protein -
E3B71_RS26335 () 120336..120569 - 234 WP_000005990.1 DUF905 family protein -
E3B71_RS26340 () 120637..121176 - 540 WP_000290840.1 single-stranded DNA-binding protein -
E3B71_RS26345 () 121202..121408 - 207 WP_000275856.1 hypothetical protein -
E3B71_RS26360 () 121818..122024 - 207 WP_001774176.1 hypothetical protein -
E3B71_RS26365 () 122050..122615 - 566 Protein_147 class I SAM-dependent methyltransferase -
E3B71_RS26370 () 122663..124024 - 1362 WP_000199439.1 DUF3560 domain-containing protein -
E3B71_RS26375 () 124076..124306 - 231 WP_000218642.1 hypothetical protein -
E3B71_RS27670 () 124818..125066 + 249 WP_071781657.1 hypothetical protein -
E3B71_RS26385 () 125338..125529 - 192 WP_001027495.1 hypothetical protein -
E3B71_RS26390 () 125526..125948 - 423 WP_000271685.1 DUF1380 family protein -
E3B71_RS26395 () 125995..126297 - 303 WP_001666994.1 antirestriction protein -
E3B71_RS26410 () 126834..127604 - 771 WP_001006251.1 hypothetical protein -
E3B71_RS26415 () 127649..128083 - 435 WP_001546462.1 DUF1380 family protein -
E3B71_RS26420 () 128097..128318 - 222 WP_001104873.1 hypothetical protein -
E3B71_RS26425 () 128319..129002 - 684 WP_032181561.1 DNA methylase -
E3B71_RS26430 () 129079..129383 - 305 Protein_158 hypothetical protein -
E3B71_RS26435 () 129387..130289 - 903 WP_064766247.1 DUF1281 domain-containing protein -
E3B71_RS26445 () 131027..131998 - 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
E3B71_RS26450 () 131998..133164 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
E3B71_RS26455 () 133752..134507 - 756 WP_000852146.1 replication initiation protein RepE -
E3B71_RS26460 () 135229..136035 - 807 WP_000016970.1 site-specific integrase -
E3B71_RS26465 () 136036..136341 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
E3B71_RS26470 () 136343..136561 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA -
E3B71_RS26480 () 137121..137351 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
E3B71_RS26485 () 137348..137764 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
E3B71_RS26490 () 137839..139404 + 1566 WP_001128474.1 AAA family ATPase -
E3B71_RS26495 () 139389..140411 + 1023 WP_000361402.1 helicase UvrD -
E3B71_RS26500 () 140665..141351 - 687 Protein_170 IS1 family transposase IS1S Transposase
E3B71_RS26505 () 141877..144078 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
E3B71_RS26510 () 144160..145437 - 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
E3B71_RS26515 () 145434..147176 - 1743 WP_001015721.1 Aerobactin synthase VF
E3B71_RS26520 () 147176..148123 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
E3B71_RS26525 () 148124..149848 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
E3B71_RS26530 () 149984..151177 + 1194 WP_000095526.1 MFS transporter -
E3B71_RS26535 () 151557..151937 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
E3B71_RS26545 () 152278..152691 - 414 Protein_178 phosphopyruvate hydratase -
E3B71_RS26550 () 152689..152946 + 258 Protein_179 Tn3 family transposase -
E3B71_RS26555 () 153180..154037 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
E3B71_RS26560 () 154034..154891 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
E3B71_RS26565 () 154888..155715 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
E3B71_RS26570 () 155715..156629 - 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
E3B71_RS26580 () 156985..157682 + 698 Protein_184 IS1 family transposase IS1G Transposase
E3B71_RS26585 () 157862..158375 - 514 Protein_185 DUF4113 domain-containing protein -
E3B71_RS26590 () 158436..158540 - 105 Protein_186 AAA family ATPase -
E3B71_RS26595 () 158542..158865 - 324 Protein_187 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance