MGE detailed information
MGE type: Mobilizable plasmid MGE length: 65845 bp
Accession: NZ_CP041921 Location: 1..65845 Organism: Escherichia coli strain Ec40743 Replicon: plasmid unnamed2
Accession: NZ_CP041921 Location: 1..65845 Organism: Escherichia coli strain Ec40743 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPV29_RS23755 () | 116..769 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| FPV29_RS23760 () | 781..1905 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| FPV29_RS23770 () | 2228..2425 | - | 198 | WP_001356717.1 | hypothetical protein | - |
| FPV29_RS23785 () | 3076..3345 | + | 270 | WP_000079598.1 | hypothetical protein | - |
| FPV29_RS23790 () | 3324..4640 | - | 1317 | WP_144114366.1 | hypothetical protein | VF |
| FPV29_RS23795 () | 4653..5288 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| FPV29_RS23800 () | 5292..5774 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| FPV29_RS23805 () | 5840..6397 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| FPV29_RS23810 () | 6442..7551 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FPV29_RS23815 () | 7542..9080 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| FPV29_RS23820 () | 9105..9599 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| FPV29_RS23825 () | 9583..10905 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| FPV29_RS23830 () | 10944..12587 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| FPV29_RS23835 () | 12580..13116 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| FPV29_RS23840 () | 13163..15121 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FPV29_RS23845 () | 15137..16192 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| FPV29_RS23850 () | 16211..17350 | - | 1140 | WP_100783609.1 | Type IV secretion system protein virB10 | VF |
| FPV29_RS23855 () | 17340..18041 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| FPV29_RS23860 () | 18107..18841 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| FPV29_RS23870 () | 19007..21364 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| FPV29_RS23875 () | 21370..21690 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| FPV29_RS23880 () | 21761..21949 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| FPV29_RS23885 () | 22051..22635 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| FPV29_RS23890 () | 22656..23054 | - | 399 | WP_072643816.1 | hypothetical protein | - |
| FPV29_RS23895 () | 23173..23610 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| FPV29_RS23900 () | 23616..24851 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| FPV29_RS23905 () | 24854..25153 | - | 300 | WP_000835764.1 | IncN plasmid KikA protein | - |
| FPV29_RS23910 () | 25221..25502 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FPV29_RS23915 () | 25492..25743 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| FPV29_RS23920 () | 25843..26478 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| FPV29_RS23925 () | 26551..26838 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| FPV29_RS23930 () | 26851..27105 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| FPV29_RS23935 () | 27107..27748 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| FPV29_RS23940 () | 27754..28749 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| FPV29_RS23945 () | 28753..29010 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| FPV29_RS23950 () | 29007..29309 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| FPV29_RS23955 () | 29290..29547 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| FPV29_RS23960 () | 29580..30026 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| FPV29_RS24950 () | 30037..30207 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| FPV29_RS23965 () | 30211..30654 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| FPV29_RS23975 () | 31028..31981 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| FPV29_RS24955 () | 32008..32184 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| FPV29_RS23980 () | 32177..32392 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| FPV29_RS23985 () | 32385..32891 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| FPV29_RS23990 () | 33977..35005 | + | 1029 | WP_001175213.1 | replication initiation protein | - |
| FPV29_RS24010 () | 36414..36575 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| FPV29_RS24015 () | 36724..37320 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| FPV29_RS24960 () | 37338..37622 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| FPV29_RS24025 () | 37696..38361 | - | 666 | WP_015387337.1 | P-loop NTPase | - |
| FPV29_RS24965 () | 38598..38951 | + | 354 | WP_157806643.1 | hypothetical protein | - |
| FPV29_RS24030 () | 38948..39463 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| FPV29_RS24035 () | 39567..40109 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| FPV29_RS24040 () | 40106..40360 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| FPV29_RS24045 () | 40357..40599 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| FPV29_RS24050 () | 40736..41068 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| FPV29_RS24055 () | 41115..41990 | - | 876 | WP_087587947.1 | Beta-lactamase CTX-M-1 | ARG |
| FPV29_RS24060 () | 42243..43505 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| FPV29_RS24070 () | 44264..44593 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| FPV29_RS24080 () | 45174..45497 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| FPV29_RS24085 () | 45539..45748 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| FPV29_RS24090 () | 45845..46069 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| FPV29_RS24095 () | 46121..46381 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| FPV29_RS24100 () | 46371..46622 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| FPV29_RS24115 () | 47172..47450 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| FPV29_RS24120 () | 47870..48136 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FPV29_RS24125 () | 48243..48425 | - | 183 | WP_001481829.1 | hypothetical protein | - |
| FPV29_RS24130 () | 48983..49165 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| FPV29_RS24135 () | 49190..49627 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| FPV29_RS24140 () | 49758..50084 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| FPV29_RS24145 () | 50104..50811 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| FPV29_RS24150 () | 50813..51565 | - | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| FPV29_RS24155 () | 51583..51984 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| FPV29_RS24160 () | 52352..52693 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| FPV29_RS24165 () | 52690..57003 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| FPV29_RS24170 () | 57224..58849 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| FPV29_RS24175 () | 58921..59694 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| FPV29_RS24970 () | 59653..60093 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| FPV29_RS24185 () | 60439..60645 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| FPV29_RS24190 () | 60714..62879 | - | 2166 | WP_143830450.1 | type IA DNA topoisomerase | - |
| FPV29_RS24195 () | 62884..63459 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| FPV29_RS24200 () | 63629..65305 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|