MGE detailed information
MGE type: Conjugative plasmid MGE length: 130003 bp
Accession: NZ_CP041358 Location: 1..130003 Organism: Escherichia coli strain U1 Replicon: plasmid unnamed1
Accession: NZ_CP041358 Location: 1..130003 Organism: Escherichia coli strain U1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3Z32_RS00010 () | 290..439 | - | 150 | Protein_1 | IS3 family transposase | - |
| E3Z32_RS00015 () | 478..2016 | - | 1539 | WP_000099150.1 | IS66 family transposase ISEc22 | Transposase |
| E3Z32_RS00020 () | 2065..2412 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| E3Z32_RS00025 () | 2409..2813 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| E3Z32_RS00030 () | 2929..3963 | + | 1035 | Protein_5 | IS3 family transposase IS3 | Transposase |
| E3Z32_RS00035 () | 4192..5700 | - | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| E3Z32_RS00045 () | 6373..7112 | - | 740 | Protein_7 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS00050 () | 7214..7474 | + | 261 | WP_000371883.1 | hypothetical protein | - |
| E3Z32_RS00055 () | 7471..7980 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| E3Z32_RS00060 () | 8000..8347 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| E3Z32_RS00065 () | 8476..8694 | + | 219 | WP_001336934.1 | hypothetical protein | - |
| E3Z32_RS00085 () | 10264..10950 | + | 687 | Protein_12 | replication initiation protein | - |
| E3Z32_RS00090 () | 11282..12157 | + | 876 | WP_001537591.1 | ChaN family lipoprotein | - |
| E3Z32_RS00095 () | 12165..12941 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| E3Z32_RS00100 () | 13110..15371 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| E3Z32_RS00110 () | 15440..16615 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| E3Z32_RS00115 () | 17138..17443 | - | 306 | Protein_17 | IS91 family transposase ISSbo1 | Transposase |
| E3Z32_RS00120 () | 17469..17872 | + | 404 | Protein_18 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS00125 () | 17936..18691 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| E3Z32_RS00130 () | 18688..20187 | - | 1500 | WP_142767521.1 | IS21 family transposase ISEc10 | Transposase |
| E3Z32_RS00135 () | 20273..20623 | + | 351 | Protein_21 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS27115 () | 21092..21256 | + | 165 | WP_185955043.1 | hypothetical protein | - |
| E3Z32_RS00145 () | 21295..22803 | + | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| E3Z32_RS00150 () | 22887..23366 | + | 480 | Protein_24 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS00155 () | 23456..23892 | + | 437 | Protein_25 | IS3 family transposase IS2 | Transposase |
| E3Z32_RS00160 () | 24417..24689 | + | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| E3Z32_RS00165 () | 25135..25310 | + | 176 | Protein_27 | IS3 family transposase | - |
| E3Z32_RS00170 () | 25536..26705 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| E3Z32_RS00175 () | 27072..27260 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| E3Z32_RS00180 () | 27381..28121 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| E3Z32_RS00185 () | 28364..29341 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| E3Z32_RS00195 () | 29985..30396 | - | 412 | Protein_32 | DDE-type integrase/transposase/recombinase | - |
| E3Z32_RS00200 () | 30398..30685 | - | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3Z32_RS00205 () | 30682..30933 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3Z32_RS00215 () | 31691..32896 | + | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| E3Z32_RS00220 () | 32893..33855 | + | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| E3Z32_RS00225 () | 34089..34865 | + | 777 | Protein_37 | hypothetical protein | - |
| E3Z32_RS27120 () | 35032..35175 | + | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| E3Z32_RS27125 () | 35182..35541 | + | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| E3Z32_RS00245 () | 35605..35916 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| E3Z32_RS00250 () | 35992..36675 | + | 684 | WP_000086171.1 | DNA methylase | - |
| E3Z32_RS00255 () | 36676..36897 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| E3Z32_RS00260 () | 36911..37345 | + | 435 | WP_000274451.1 | DUF1380 family protein | - |
| E3Z32_RS00265 () | 37390..38160 | + | 771 | WP_001044390.1 | hypothetical protein | - |
| E3Z32_RS00280 () | 38697..38999 | + | 303 | WP_001364029.1 | antirestriction protein | - |
| E3Z32_RS00285 () | 39046..39465 | + | 420 | WP_000271761.1 | DUF1380 family protein | - |
| E3Z32_RS00290 () | 39465..39656 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| E3Z32_RS27130 () | 39635..39943 | - | 309 | WP_050576143.1 | hypothetical protein | - |
| E3Z32_RS00305 () | 40624..40854 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| E3Z32_RS00310 () | 40906..42267 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| E3Z32_RS00315 () | 42538..42876 | + | 339 | WP_072198834.1 | class I SAM-dependent methyltransferase | - |
| E3Z32_RS00335 () | 43707..44234 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| E3Z32_RS00340 () | 44292..44525 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| E3Z32_RS00345 () | 44586..46550 | + | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| E3Z32_RS00350 () | 46619..47053 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| E3Z32_RS00355 () | 47050..47769 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 47781..48005 | + | 225 | NuclAT_0 | - | - |
| - () | 47781..48005 | + | 225 | NuclAT_0 | - | - |
| - () | 47781..48005 | + | 225 | NuclAT_0 | - | - |
| - () | 47781..48005 | + | 225 | NuclAT_0 | - | - |
| E3Z32_RS27135 () | 47790..47969 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| E3Z32_RS00360 () | 48049..48207 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| E3Z32_RS00365 () | 48508..48712 | - | 205 | Protein_59 | pilus protein | - |
| E3Z32_RS00375 () | 49104..49400 | + | 297 | WP_001545326.1 | hypothetical protein | - |
| E3Z32_RS00380 () | 49510..50331 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| E3Z32_RS00385 () | 50628..51230 | - | 603 | Protein_62 | hypothetical protein | VF |
| E3Z32_RS00390 () | 51551..51934 | + | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| E3Z32_RS00395 () | 52121..52810 | + | 690 | WP_000283387.1 | conjugal transfer transcriptional regulator TraJ | - |
| E3Z32_RS00400 () | 52909..53304 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| E3Z32_RS00405 () | 53337..53696 | + | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| E3Z32_RS00410 () | 53711..54022 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| E3Z32_RS00415 () | 54044..54610 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| E3Z32_RS00420 () | 54597..55325 | + | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| E3Z32_RS00425 () | 55325..56776 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| E3Z32_RS00430 () | 56745..57332 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| E3Z32_RS00435 () | 57286..57636 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| E3Z32_RS00440 () | 57720..59258 | - | 1539 | WP_001550332.1 | IS66 family transposase ISEc8 | Transposase |
| E3Z32_RS00445 () | 59308..59655 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| E3Z32_RS00450 () | 59652..60032 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| E3Z32_RS00455 () | 60092..60601 | + | 510 | WP_142767522.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3Z32_RS00460 () | 60736..60957 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| E3Z32_RS00465 () | 60950..61363 | + | 414 | WP_000549574.1 | hypothetical protein | - |
| E3Z32_RS00470 () | 61356..61829 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| E3Z32_RS00485 () | 62434..63131 | + | 698 | Protein_80 | IS1 family transposase IS1G | Transposase |
| E3Z32_RS00490 () | 63148..63324 | + | 177 | Protein_81 | TraU family protein | - |
| E3Z32_RS00495 () | 63351..63659 | + | 309 | WP_000412445.1 | hypothetical protein | - |
| E3Z32_RS00500 () | 63722..64240 | + | 519 | WP_000009088.1 | hypothetical protein | - |
| E3Z32_RS00505 () | 64267..64905 | + | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3Z32_RS00510 () | 64902..65273 | + | 372 | WP_000174465.1 | hypothetical protein | - |
| E3Z32_RS00515 () | 65298..65720 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| E3Z32_RS00520 () | 65717..67567 | + | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3Z32_RS00525 () | 67594..67851 | + | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| E3Z32_RS00530 () | 67844..68587 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3Z32_RS00535 () | 68601..68942 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| E3Z32_RS00540 () | 68998..69258 | - | 261 | WP_000736412.1 | hypothetical protein | - |
| E3Z32_RS00545 () | 69339..69623 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E3Z32_RS00550 () | 69610..70155 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3Z32_RS00555 () | 70085..70459 | + | 375 | WP_071586940.1 | P-type conjugative transfer protein TrbJ | - |
| E3Z32_RS00560 () | 70380..70805 | + | 426 | WP_001336804.1 | F-type conjugal transfer protein TrbF | - |
| E3Z32_RS00565 () | 70792..72165 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| E3Z32_RS00570 () | 72162..74981 | + | 2820 | WP_001537571.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3Z32_RS00575 () | 75000..75497 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| E3Z32_RS00580 () | 75529..76260 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| E3Z32_RS00585 () | 76463..77200 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| E3Z32_RS00590 () | 77251..79494 | + | 2244 | WP_033550317.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3Z32_RS00595 () | 79494..84764 | + | 5271 | WP_001550317.1 | Multifunctional conjugation protein TraI | Relaxase |
| E3Z32_RS00600 () | 84784..85530 | + | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| E3Z32_RS00605 () | 85585..86142 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| E3Z32_RS00610 () | 86294..86497 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| E3Z32_RS00615 () | 87250..87711 | + | 462 | WP_000760080.1 | thermonuclease family protein | - |
| E3Z32_RS00620 () | 87814..88197 | + | 384 | WP_001109264.1 | hypothetical protein | - |
| E3Z32_RS00625 () | 88350..88787 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - () | 88882..88938 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88882..88938 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88882..88938 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88882..88938 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| E3Z32_RS00635 () | 88986..89135 | + | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| E3Z32_RS00640 () | 89420..89677 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| E3Z32_RS00650 () | 89911..89985 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| E3Z32_RS00655 () | 89978..90835 | + | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| E3Z32_RS00665 () | 91536..91748 | + | 213 | WP_001336932.1 | hypothetical protein | - |
| E3Z32_RS00670 () | 91863..92171 | - | 309 | Protein_114 | IS91 family transposase ISSbo1 | Transposase |
| E3Z32_RS27140 () | 92364..92462 | + | 99 | WP_137491101.1 | transposase | - |
| E3Z32_RS00680 () | 92612..92860 | - | 249 | WP_000738203.1 | hypothetical protein | - |
| E3Z32_RS00685 () | 92890..93660 | - | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| E3Z32_RS00690 () | 93671..94270 | - | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| E3Z32_RS00695 () | 94412..95134 | + | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| E3Z32_RS00700 () | 95131..96603 | + | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| E3Z32_RS00705 () | 96981..97148 | - | 168 | Protein_121 | IS110 family transposase | - |
| E3Z32_RS00710 () | 97202..97906 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E3Z32_RS00715 () | 98239..99054 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| E3Z32_RS00725 () | 99401..101287 | + | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| E3Z32_RS00730 () | 101328..101855 | + | 528 | WP_000178050.1 | iron transporter | - |
| E3Z32_RS00735 () | 101959..103338 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| E3Z32_RS00740 () | 103341..104624 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| E3Z32_RS00745 () | 104614..105744 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| E3Z32_RS00750 () | 105749..106444 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| E3Z32_RS00755 () | 106431..106916 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| E3Z32_RS00760 () | 106941..107426 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| E3Z32_RS00765 () | 107548..108180 | + | 633 | Protein_132 | histidine-type phosphatase | - |
| E3Z32_RS00770 () | 108330..109309 | - | 980 | Protein_133 | IS5 family transposase ISKpn26 | Transposase |
| E3Z32_RS00780 () | 109411..109980 | + | 570 | WP_001336919.1 | Serine protease EspC | VF |
| E3Z32_RS00785 () | 109983..110456 | - | 474 | Protein_135 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS00790 () | 110546..112054 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| E3Z32_RS00800 () | 112727..113466 | - | 740 | Protein_137 | IS3 family transposase IS629 | Transposase |
| E3Z32_RS00805 () | 113521..113769 | - | 249 | Protein_138 | IS21 family transposase IS21 | Transposase |
| E3Z32_RS00815 () | 114252..115004 | + | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| E3Z32_RS00820 () | 115067..117583 | + | 2517 | WP_162929852.1 | F1 capsule-anchoring protein | VF |
| E3Z32_RS00825 () | 117599..118021 | + | 423 | WP_000243157.1 | Protein AfaD | VF |
| E3Z32_RS00830 () | 118129..118614 | + | 486 | WP_001545321.1 | Dr family adhesin structural subunit | - |
| E3Z32_RS00840 () | 120352..120768 | + | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| E3Z32_RS00845 () | 120973..121764 | - | 792 | WP_000456855.1 | Virulence regulon transcriptional activator VirF | VF |
| E3Z32_RS00850 () | 122089..122594 | + | 506 | Protein_146 | IS3 family transposase IS3H | Transposase |
| E3Z32_RS00855 () | 122587..122700 | + | 114 | Protein_147 | integrase core domain-containing protein | - |
| E3Z32_RS00860 () | 122850..123848 | + | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| E3Z32_RS00865 () | 123848..124885 | + | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| E3Z32_RS00870 () | 124885..125646 | + | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| E3Z32_RS00875 () | 125703..126890 | + | 1188 | WP_025999368.1 | MFS transporter | - |
| E3Z32_RS00880 () | 126968..127243 | - | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| E3Z32_RS00885 () | 127601..127900 | - | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E3Z32_RS00890 () | 127890..128153 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| E3Z32_RS00895 () | 128260..128520 | - | 261 | WP_001545316.1 | hypothetical protein | - |
| E3Z32_RS00900 () | 128730..129212 | - | 483 | WP_001337004.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|