MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP041110 Location: 3613510..3614490 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: chromosome
Accession: NZ_CP041110 Location: 3613510..3614490 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CI675_RS17585 () | 3609369..3610088 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
CI675_RS17590 () | 3610615..3611469 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
CI675_RS17595 () | 3611695..3613020 | + | 1326 | WP_001046308.1 | pyridine nucleotide-disulfide oxidoreductase | - |
CI675_RS17600 () | 3613129..3613365 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
CI675_RS17605 () | 3613510..3614490 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
CI675_RS17610 () | 3614637..3614711 | + | 75 | Protein_3427 | RNA polymerase sigma factor FliA | - |
CI675_RS17615 () | 3614724..3615587 | + | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
CI675_RS17620 () | 3615590..3616513 | + | 924 | WP_001232546.1 | putative lateral flagellar export/assembly protein LafU | - |
CI675_RS17625 () | 3616584..3617639 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
CI675_RS17630 () | 3617691..3617984 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
CI675_RS17635 () | 3617987..3618385 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
CI675_RS17640 () | 3618395..3618847 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
CI675_RS17645 () | 3619165..3619371 | + | 207 | Protein_3434 | RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |