MGE detailed information
MGE type: Conjugative plasmid MGE length: 85191 bp
Accession: NZ_CP039405 Location: 1..85191 Organism: Escherichia coli strain 377323_2f Replicon: plasmid unnamed
Accession: NZ_CP039405 Location: 1..85191 Organism: Escherichia coli strain 377323_2f Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E9097_RS24705 () | 1..396 | + | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| E9097_RS24710 () | 765..1973 | - | 1209 | WP_074466352.1 | IS256 family transposase IS1414 | Transposase |
| E9097_RS24715 () | 2047..3069 | + | 1023 | Protein_3 | alpha-galactosidase | - |
| E9097_RS24720 () | 3132..3245 | + | 114 | Protein_4 | MFS transporter | - |
| E9097_RS24725 () | 3240..3539 | - | 300 | Protein_5 | integrase core domain-containing protein | - |
| E9097_RS24730 () | 3538..3993 | + | 456 | Protein_6 | IS3 family transposase | - |
| E9097_RS24735 () | 4026..4568 | + | 543 | Protein_7 | IS3 family transposase ISEc48 | Transposase |
| E9097_RS25490 () | 4756..5319 | + | 564 | WP_062860118.1 | Major structural subunit of bundle-forming pilus | VF |
| E9097_RS24745 () | 5574..6227 | - | 654 | Protein_9 | IS3 family transposase IS629 | Transposase |
| E9097_RS25495 () | 6224..6409 | + | 186 | Protein_10 | IS91 family transposase | - |
| E9097_RS24750 () | 6579..6711 | - | 133 | Protein_11 | phage integrase family protein | - |
| E9097_RS24755 () | 6712..7017 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E9097_RS24760 () | 7019..7237 | - | 219 | WP_062860119.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E9097_RS24770 () | 7833..8077 | + | 245 | Protein_14 | hypothetical protein | - |
| E9097_RS24775 () | 8077..8667 | + | 591 | WP_062860120.1 | hypothetical protein | - |
| E9097_RS25405 () | 8792..9655 | - | 864 | WP_062860121.1 | IS3 family transposase ISEcB1 | Transposase |
| E9097_RS25410 () | 9631..10137 | - | 507 | WP_062897179.1 | IS3 family transposase ISEcB1 | Transposase |
| E9097_RS24785 () | 10443..11258 | + | 816 | WP_062860059.1 | helix-turn-helix transcriptional regulator | - |
| E9097_RS24790 () | 11498..11635 | - | 138 | WP_062860058.1 | hypothetical protein | - |
| E9097_RS24795 () | 11646..11777 | - | 132 | WP_062860057.1 | IS3 family transposase IS1351 | Transposase |
| E9097_RS24800 () | 12475..13556 | + | 1082 | WP_101750278.1 | IS3 family transposase ISEc16 | Transposase |
| E9097_RS24810 () | 14126..14902 | + | 777 | WP_062860055.1 | helix-turn-helix transcriptional regulator | - |
| E9097_RS24815 () | 15138..15797 | + | 660 | Protein_23 | IS4 family transposase ISEc60 | Transposase |
| E9097_RS24820 () | 15808..16196 | - | 389 | Protein_24 | IS256 family transposase ISEic2 | Transposase |
| E9097_RS24825 () | 16482..16862 | - | 381 | WP_062860054.1 | Major structural subunit of bundle-forming pilus | VF |
| E9097_RS24840 () | 18527..18655 | - | 129 | Protein_27 | integrase core domain-containing protein | - |
| E9097_RS24845 () | 19121..19570 | - | 450 | WP_062860050.1 | hypothetical protein | VF |
| E9097_RS24850 () | 19573..20061 | - | 489 | WP_062860049.1 | hypothetical protein | VF |
| E9097_RS24855 () | 20051..20599 | - | 549 | WP_062860048.1 | hypothetical protein | VF |
| E9097_RS24860 () | 20596..21135 | - | 540 | WP_062860047.1 | hypothetical protein | VF |
| E9097_RS24865 () | 21155..21601 | - | 447 | WP_062860046.1 | hypothetical protein | VF |
| E9097_RS24870 () | 21583..22332 | - | 750 | WP_136503196.1 | Leader peptidase PppA | VF |
| E9097_RS24875 () | 22339..23295 | - | 957 | WP_062860044.1 | ComG operon protein 1 | VF |
| E9097_RS24880 () | 23314..24372 | - | 1059 | WP_062860043.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| E9097_RS24885 () | 24379..25986 | - | 1608 | WP_122995108.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| E9097_RS24890 () | 25993..26487 | - | 495 | WP_062860060.1 | hypothetical protein | VF |
| E9097_RS24895 () | 26465..27673 | - | 1209 | WP_062860041.1 | hypothetical protein | VF |
| E9097_RS24900 () | 27670..29328 | - | 1659 | WP_062860040.1 | Outer membrane lipoprotein BfpB | VF |
| E9097_RS24905 () | 29335..29736 | - | 402 | WP_062860039.1 | hypothetical protein | VF |
| E9097_RS24910 () | 29783..30364 | - | 582 | WP_062860038.1 | Major structural subunit of bundle-forming pilus | VF |
| E9097_RS24915 () | 30787..31525 | + | 739 | Protein_42 | site-specific integrase | - |
| E9097_RS24920 () | 31804..32781 | - | 978 | WP_062860037.1 | RepB family plasmid replication initiator protein | - |
| E9097_RS24940 () | 34179..34592 | + | 414 | WP_062859980.1 | hypothetical protein | - |
| E9097_RS24945 () | 34543..35740 | + | 1198 | Protein_45 | IS91 family transposase ISEc37 | Transposase |
| E9097_RS24950 () | 36680..37540 | + | 861 | WP_062859948.1 | alpha/beta hydrolase | - |
| E9097_RS24960 () | 38499..39122 | - | 624 | WP_062859950.1 | proQ/FINO family protein | - |
| E9097_RS24965 () | 39182..39592 | - | 411 | Protein_48 | serine acetyltransferase | - |
| E9097_RS24970 () | 40105..40593 | - | 489 | WP_062859951.1 | GNAT family N-acetyltransferase | Toxin Detail |
| E9097_RS24975 () | 40581..40865 | - | 285 | WP_073534343.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| E9097_RS24995 () | 41780..42637 | - | 858 | WP_062859953.1 | incFII family plasmid replication initiator RepA | - |
| E9097_RS25000 () | 42630..42704 | - | 75 | WP_062859978.1 | RepA leader peptide Tap | - |
| E9097_RS25010 () | 42947..43195 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| E9097_RS25015 () | 43435..44025 | - | 591 | WP_062859954.1 | DUF2726 domain-containing protein | - |
| E9097_RS25020 () | 44064..44273 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| E9097_RS25025 () | 44319..44780 | - | 462 | Protein_56 | thermonuclease family protein | - |
| E9097_RS25030 () | 45026..45238 | - | 213 | WP_062859955.1 | hypothetical protein | - |
| E9097_RS25035 () | 45379..45939 | - | 561 | WP_062859956.1 | fertility inhibition protein FinO | - |
| E9097_RS25040 () | 45994..46740 | - | 747 | WP_062859957.1 | conjugal transfer pilus acetylase TraX | - |
| E9097_RS25045 () | 46760..52030 | - | 5271 | WP_062859958.1 | Multifunctional conjugation protein TraI | Relaxase |
| E9097_RS25050 () | 52112..52339 | + | 228 | WP_000450526.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E9097_RS25055 () | 52339..52737 | + | 399 | WP_062859959.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E9097_RS25060 () | 52746..54899 | - | 2154 | WP_062859960.1 | type IV conjugative transfer system coupling protein TraD | - |
| E9097_RS25065 () | 55220..55913 | - | 694 | Protein_64 | hypothetical protein | - |
| E9097_RS25070 () | 56128..56436 | + | 309 | WP_062859961.1 | heavy metal-binding domain-containing protein | - |
| E9097_RS25075 () | 56439..59258 | - | 2820 | WP_062862128.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E9097_RS25080 () | 59255..60628 | - | 1374 | WP_062859963.1 | conjugal transfer protein TraH | - |
| E9097_RS25085 () | 60615..61040 | - | 426 | WP_073976889.1 | F-type conjugal transfer protein TrbF | - |
| E9097_RS25090 () | 61018..61335 | - | 318 | WP_073976890.1 | P-type conjugative transfer protein TrbJ | - |
| E9097_RS25095 () | 61265..61810 | - | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E9097_RS25100 () | 61797..62081 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E9097_RS25105 () | 62162..62476 | + | 315 | WP_062859966.1 | hypothetical protein | - |
| E9097_RS25110 () | 62478..62825 | - | 348 | WP_062859967.1 | conjugal transfer protein TrbA | - |
| E9097_RS25115 () | 62841..63584 | - | 744 | WP_062859968.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E9097_RS25120 () | 63577..63834 | - | 258 | WP_062859969.1 | conjugal transfer protein TrbE | - |
| E9097_RS25125 () | 63861..65648 | - | 1788 | WP_062859979.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E9097_RS25130 () | 65959..66339 | - | 381 | WP_062859970.1 | hypothetical protein | - |
| E9097_RS25135 () | 66336..66974 | - | 639 | WP_062859971.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E9097_RS25140 () | 66983..67975 | - | 993 | WP_062859972.1 | conjugal transfer pilus assembly protein TraU | - |
| E9097_RS25145 () | 67972..68604 | - | 633 | WP_062859973.1 | type-F conjugative transfer system protein TraW | - |
| E9097_RS25150 () | 68601..68987 | - | 387 | WP_062859974.1 | type-F conjugative transfer system protein TrbI | - |
| E9097_RS25155 () | 68984..71614 | - | 2631 | WP_062859975.1 | type IV secretion system protein TraC | - |
| E9097_RS25160 () | 71740..72102 | - | 363 | WP_029400175.1 | hypothetical protein | - |
| E9097_RS25165 () | 72130..72348 | - | 219 | WP_000556751.1 | hypothetical protein | - |
| E9097_RS25170 () | 72428..72904 | - | 477 | WP_062859976.1 | hypothetical protein | - |
| E9097_RS25175 () | 72897..73118 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| E9097_RS25180 () | 73253..73768 | - | 516 | WP_000809895.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E9097_RS25185 () | 73765..74133 | - | 369 | WP_062859977.1 | conjugal transfer protein TrbD | - |
| E9097_RS25190 () | 74072..74662 | - | 591 | WP_062897178.1 | conjugal transfer protein TraP | - |
| E9097_RS25195 () | 74652..76079 | - | 1428 | WP_074464844.1 | conjugal transfer protein TraB | - |
| E9097_RS25200 () | 76079..76783 | - | 705 | WP_158707952.1 | type-F conjugative transfer system secretin TraK | - |
| E9097_RS25205 () | 76794..77360 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| E9097_RS25210 () | 77382..77693 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E9097_RS25215 () | 77708..78106 | - | 399 | WP_062859933.1 | type IV conjugative transfer system pilin TraA | - |
| E9097_RS25220 () | 78140..78379 | - | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| E9097_RS25225 () | 78487..79134 | - | 648 | WP_074464494.1 | transcriptional regulator TraJ family protein | - |
| E9097_RS25230 () | 79326..79709 | - | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| E9097_RS25235 () | 80123..80632 | + | 510 | Protein_98 | hypothetical protein | VF |
| E9097_RS25240 () | 80928..81749 | - | 822 | WP_074453754.1 | DUF945 domain-containing protein | - |
| E9097_RS25245 () | 81869..82155 | - | 287 | Protein_100 | hypothetical protein | - |
| E9097_RS25255 () | 82352..82609 | - | 258 | WP_072193410.1 | hypothetical protein | - |
| E9097_RS25415 () | 82596..82928 | - | 333 | WP_168796711.1 | hypothetical protein | - |
| E9097_RS25260 () | 82892..83794 | - | 903 | WP_136503197.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|