MGE detailed information
MGE type: Prophage MGE length: 65974 bp
Accession: NZ_CP039167 Location: 1512764..1578737 Organism: Staphylococcus aureus strain R50 Replicon: chromosome
Accession: NZ_CP039167 Location: 1512764..1578737 Organism: Staphylococcus aureus strain R50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1952_RS07530 () | 1508513..1508761 | + | 249 | WP_001151997.1 | ferredoxin | - |
| E1952_RS07535 () | 1508867..1509412 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| E1952_RS07540 () | 1509822..1510736 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| E1952_RS07545 () | 1510793..1511710 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| E1952_RS07550 () | 1511768..1512673 | - | 906 | WP_001837492.1 | DUF1672 domain-containing protein | - |
| E1952_RS07555 () | 1512764..1512949 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| E1952_RS07560 () | 1513198..1514181 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| E1952_RS07565 () | 1514177..1515115 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| E1952_RS07570 () | 1515505..1516959 | - | 1455 | WP_000909197.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E1952_RS07575 () | 1516970..1517272 | - | 303 | WP_000992284.1 | phage holin | Toxin Detail |
| E1952_RS07580 () | 1517323..1517430 | + | 108 | WP_031867548.1 | hypothetical protein | - |
| - () | 1517352..1517491 | + | 140 | NuclAT_0 | - | - |
| - () | 1517352..1517491 | + | 140 | NuclAT_0 | - | - |
| - () | 1517352..1517491 | + | 140 | NuclAT_0 | - | - |
| - () | 1517352..1517491 | + | 140 | NuclAT_0 | - | - |
| E1952_RS07585 () | 1517439..1517660 | - | 222 | WP_073391028.1 | putative holin-like toxin | Toxin Detail |
| E1952_RS07590 () | 1517769..1518542 | - | 774 | WP_000750407.1 | Enterotoxin type A | VF |
| E1952_RS07595 () | 1518963..1519337 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| E1952_RS07600 () | 1519393..1519680 | - | 288 | WP_001262620.1 | hypothetical protein | - |
| E1952_RS07605 () | 1519726..1519878 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| E1952_RS07610 () | 1519871..1523653 | - | 3783 | WP_103150535.1 | hypothetical protein | - |
| E1952_RS07615 () | 1523669..1525153 | - | 1485 | WP_000567390.1 | phage tail family protein | - |
| E1952_RS07620 () | 1525150..1529694 | - | 4545 | WP_000504562.1 | phage tail tape measure protein | - |
| E1952_RS14810 () | 1529751..1529888 | - | 138 | WP_001837493.1 | hypothetical protein | - |
| E1952_RS07625 () | 1529939..1530289 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| E1952_RS07630 () | 1530339..1530563 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| E1952_RS07635 () | 1530605..1531249 | - | 645 | WP_000268740.1 | phage tail protein | - |
| E1952_RS07640 () | 1531250..1531657 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| E1952_RS07645 () | 1531654..1532058 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| E1952_RS07650 () | 1532055..1532417 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| E1952_RS07655 () | 1532401..1532685 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| E1952_RS07660 () | 1532675..1532959 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| E1952_RS07665 () | 1532979..1534124 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| E1952_RS07670 () | 1534148..1534885 | - | 738 | WP_000642726.1 | Clp protease ClpP | - |
| E1952_RS07675 () | 1534869..1536056 | - | 1188 | WP_000025277.1 | phage portal protein | - |
| E1952_RS07680 () | 1536072..1537733 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| E1952_RS07685 () | 1537730..1538074 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| E1952_RS07690 () | 1538205..1538504 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| E1952_RS07695 () | 1538736..1539152 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| E1952_RS07700 () | 1539180..1539380 | - | 201 | WP_000265042.1 | DUF1514 family protein | - |
| E1952_RS07705 () | 1539380..1539529 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| E1952_RS07710 () | 1539526..1539912 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| E1952_RS07715 () | 1539909..1540115 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| E1952_RS07720 () | 1540112..1540357 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| E1952_RS07725 () | 1540394..1540936 | - | 543 | WP_000185660.1 | dUTP pyrophosphatase | - |
| E1952_RS07730 () | 1540929..1541111 | - | 183 | WP_000028422.1 | hypothetical protein | Antitoxin Detail |
| E1952_RS07735 () | 1541101..1541352 | - | 252 | WP_001837494.1 | DUF1024 family protein | Toxin Detail |
| E1952_RS07740 () | 1541345..1541629 | - | 285 | WP_001105620.1 | hypothetical protein | - |
| E1952_RS07750 () | 1541823..1541936 | - | 114 | Protein_1487 | hypothetical protein | - |
| E1952_RS07755 () | 1541937..1542122 | - | 186 | WP_001187245.1 | DUF3113 family protein | - |
| E1952_RS07760 () | 1542127..1542531 | - | 405 | WP_000049795.1 | DUF1064 domain-containing protein | - |
| E1952_RS07765 () | 1542541..1542762 | - | 222 | WP_001123695.1 | DUF3269 family protein | - |
| E1952_RS07770 () | 1542776..1542934 | - | 159 | WP_000256597.1 | hypothetical protein | - |
| E1952_RS07775 () | 1542928..1543707 | - | 780 | WP_000803063.1 | ATP-binding protein | - |
| E1952_RS07780 () | 1543717..1544487 | - | 771 | WP_000190254.1 | conserved phage C-terminal domain-containing protein | - |
| E1952_RS07785 () | 1544553..1544834 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| E1952_RS14815 () | 1544827..1544976 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| E1952_RS07790 () | 1544973..1545644 | - | 672 | WP_001199422.1 | hypothetical protein | - |
| E1952_RS07795 () | 1545657..1546208 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| E1952_RS07800 () | 1546237..1547025 | - | 789 | WP_000134097.1 | ATP-binding protein | - |
| E1952_RS07805 () | 1547018..1547239 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| E1952_RS07810 () | 1547249..1547509 | - | 261 | WP_000291066.1 | DUF1108 family protein | - |
| E1952_RS07815 () | 1547601..1547921 | - | 321 | WP_000219665.1 | hypothetical protein | - |
| E1952_RS07820 () | 1547922..1548089 | - | 168 | WP_001285950.1 | DUF1270 domain-containing protein | - |
| E1952_RS07825 () | 1548101..1548364 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| E1952_RS07830 () | 1548394..1548612 | - | 219 | WP_001038398.1 | hypothetical protein | - |
| E1952_RS07835 () | 1548609..1548935 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| E1952_RS14820 () | 1549012..1549149 | - | 138 | WP_001662405.1 | hypothetical protein | - |
| E1952_RS07840 () | 1549169..1549429 | - | 261 | WP_000435343.1 | hypothetical protein | - |
| E1952_RS07845 () | 1549442..1550239 | - | 798 | WP_001148574.1 | phage antirepressor Ant | - |
| E1952_RS07850 () | 1550255..1550497 | - | 243 | WP_000639925.1 | DUF739 family protein | - |
| E1952_RS07855 () | 1550661..1551377 | + | 717 | WP_001083970.1 | LexA family transcriptional regulator | - |
| E1952_RS07860 () | 1551395..1551838 | + | 444 | WP_000037409.1 | hypothetical protein | - |
| E1952_RS14825 () | 1551869..1552024 | + | 156 | WP_000345951.1 | hypothetical protein | - |
| E1952_RS07865 () | 1552011..1552196 | + | 186 | WP_001089803.1 | hypothetical protein | - |
| E1952_RS07870 () | 1552254..1552457 | - | 204 | WP_000477304.1 | hypothetical protein | - |
| E1952_RS07875 () | 1552485..1553366 | + | 882 | WP_000683724.1 | hypothetical protein | - |
| E1952_RS07880 () | 1553444..1554649 | + | 1206 | WP_000264740.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| E1952_RS07885 () | 1554692..1556719 | - | 2028 | WP_001829176.1 | hypothetical protein | - |
| E1952_RS07890 () | 1556731..1557639 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| E1952_RS07895 () | 1557884..1559635 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| E1952_RS07900 () | 1559616..1560341 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| E1952_RS07905 () | 1560474..1561211 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| E1952_RS07910 () | 1561204..1561746 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| E1952_RS07915 () | 1561739..1562470 | - | 732 | WP_000273375.1 | segregation/condensation protein A | - |
| E1952_RS07920 () | 1562562..1563068 | + | 507 | WP_001183435.1 | DUF309 domain-containing protein | - |
| E1952_RS07925 () | 1563146..1564033 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E1952_RS07930 () | 1564082..1564531 | - | 450 | WP_000392690.1 | transcriptional repressor | - |
| E1952_RS07935 () | 1564636..1565178 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| E1952_RS07940 () | 1565260..1566168 | + | 909 | WP_001171340.1 | aldo/keto reductase | - |
| E1952_RS07945 () | 1566384..1566632 | - | 249 | WP_000995802.1 | hypothetical protein | - |
| E1952_RS07950 () | 1566648..1567403 | - | 756 | WP_000678236.1 | SDR family oxidoreductase | - |
| E1952_RS07955 () | 1567545..1568360 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| E1952_RS07960 () | 1568463..1569383 | - | 921 | WP_000454065.1 | ribonuclease Z | - |
| E1952_RS07965 () | 1569696..1571180 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| E1952_RS07970 () | 1571410..1572276 | + | 867 | WP_001837502.1 | AraC family transcriptional regulator | - |
| E1952_RS07975 () | 1572358..1574007 | - | 1650 | WP_001041917.1 | alpha-glucosidase | - |
| E1952_RS07980 () | 1574023..1575042 | - | 1020 | WP_000256316.1 | HTH-type transcriptional regulator MalR | VF |
| E1952_RS07985 () | 1575043..1575216 | - | 174 | WP_048538637.1 | hypothetical protein | - |
| E1952_RS07990 () | 1575362..1576677 | + | 1316 | Protein_1538 | ISL3 family transposase ISSau8 | Transposase |
| E1952_RS07995 () | 1576741..1577112 | - | 372 | WP_000413427.1 | VOC family protein | - |
| E1952_RS08000 () | 1577331..1578737 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| E1952_RS08005 () | 1578805..1579938 | - | 1134 | WP_000606685.1 | tripeptidase T | - |
| E1952_RS08010 () | 1580201..1580380 | + | 180 | WP_001804902.1 | stressosome-associated protein Prli42 | - |
| E1952_RS08015 () | 1580507..1581487 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| E1952_RS08020 () | 1581501..1581938 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| E1952_RS08025 () | 1582289..1583563 | - | 1275 | WP_000406841.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|