MGE detailed information
MGE type: Prophage MGE length: 69722 bp
Accession: NZ_CP039160 Location: 1464345..1534066 Organism: Staphylococcus aureus strain Lr6 Replicon: chromosome
Accession: NZ_CP039160 Location: 1464345..1534066 Organism: Staphylococcus aureus strain Lr6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1949_RS07180 () | 1460606..1461985 | - | 1380 | WP_000902108.1 | ATP-dependent DNA helicase | - |
| E1949_RS07185 () | 1461975..1462928 | - | 954 | WP_001163809.1 | helix-turn-helix domain-containing protein | - |
| E1949_RS07190 () | 1463036..1463284 | + | 249 | WP_001151997.1 | ferredoxin | - |
| E1949_RS07195 () | 1463390..1463935 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| E1949_RS07200 () | 1464345..1465259 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| E1949_RS07205 () | 1465316..1466233 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| E1949_RS07210 () | 1466291..1467196 | - | 906 | WP_001837492.1 | DUF1672 domain-containing protein | - |
| E1949_RS07215 () | 1467287..1467472 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| E1949_RS07220 () | 1467721..1468704 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| E1949_RS07225 () | 1468700..1469638 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| E1949_RS07230 () | 1470028..1471482 | - | 1455 | WP_000909197.1 | N-acetylmuramoyl-L-alanine amidase | - |
| E1949_RS07235 () | 1471493..1471795 | - | 303 | WP_000992284.1 | phage holin | Toxin Detail |
| E1949_RS07240 () | 1471846..1471953 | + | 108 | WP_031867548.1 | hypothetical protein | - |
| - () | 1471875..1472014 | + | 140 | NuclAT_0 | - | - |
| - () | 1471875..1472014 | + | 140 | NuclAT_0 | - | - |
| - () | 1471875..1472014 | + | 140 | NuclAT_0 | - | - |
| - () | 1471875..1472014 | + | 140 | NuclAT_0 | - | - |
| E1949_RS07245 () | 1471962..1472183 | - | 222 | WP_073391028.1 | putative holin-like toxin | Toxin Detail |
| E1949_RS07250 () | 1472292..1473065 | - | 774 | WP_000750407.1 | Enterotoxin type A | VF |
| E1949_RS07255 () | 1473486..1473860 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| E1949_RS07260 () | 1473916..1474203 | - | 288 | WP_001262620.1 | hypothetical protein | - |
| E1949_RS07265 () | 1474249..1474401 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| E1949_RS07270 () | 1474394..1478176 | - | 3783 | WP_000582187.1 | hypothetical protein | - |
| E1949_RS07275 () | 1478192..1479676 | - | 1485 | WP_000567390.1 | phage tail family protein | - |
| E1949_RS07280 () | 1479673..1484217 | - | 4545 | WP_000504562.1 | phage tail tape measure protein | - |
| E1949_RS14265 () | 1484274..1484411 | - | 138 | WP_001837493.1 | hypothetical protein | - |
| E1949_RS07285 () | 1484462..1484812 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| E1949_RS07290 () | 1484862..1485086 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| E1949_RS07295 () | 1485128..1485772 | - | 645 | WP_000268740.1 | phage tail protein | - |
| E1949_RS07300 () | 1485773..1486180 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| E1949_RS07305 () | 1486177..1486581 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| E1949_RS07310 () | 1486578..1486940 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| E1949_RS07315 () | 1486924..1487208 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| E1949_RS07320 () | 1487198..1487482 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| E1949_RS07325 () | 1487502..1488647 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| E1949_RS07330 () | 1488671..1489408 | - | 738 | WP_000642726.1 | Clp protease ClpP | - |
| E1949_RS07335 () | 1489392..1490579 | - | 1188 | WP_000025277.1 | phage portal protein | - |
| E1949_RS07340 () | 1490595..1492256 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| E1949_RS07345 () | 1492253..1492597 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| E1949_RS07350 () | 1492728..1493027 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| E1949_RS07355 () | 1493259..1493675 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| E1949_RS07360 () | 1493703..1493903 | - | 201 | WP_000265042.1 | DUF1514 family protein | - |
| E1949_RS07365 () | 1493903..1494052 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| E1949_RS07370 () | 1494049..1494435 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| E1949_RS07375 () | 1494432..1494638 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| E1949_RS07380 () | 1494635..1494880 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| E1949_RS07385 () | 1494917..1495459 | - | 543 | WP_000185660.1 | dUTP pyrophosphatase | - |
| E1949_RS07390 () | 1495452..1495634 | - | 183 | WP_000028422.1 | hypothetical protein | - |
| E1949_RS07395 () | 1495624..1495875 | - | 252 | WP_001837494.1 | DUF1024 family protein | Toxin Detail |
| E1949_RS07400 () | 1495868..1496152 | - | 285 | WP_001105620.1 | hypothetical protein | - |
| E1949_RS07405 () | 1496149..1496598 | - | 450 | WP_000982708.1 | hypothetical protein | - |
| E1949_RS07410 () | 1496663..1496905 | - | 243 | WP_000131386.1 | phi PVL orf 51-like protein | - |
| E1949_RS07415 () | 1496909..1497265 | - | 357 | WP_000029376.1 | hypothetical protein | - |
| E1949_RS07420 () | 1497266..1497451 | - | 186 | WP_001187245.1 | DUF3113 family protein | - |
| E1949_RS07425 () | 1497456..1497860 | - | 405 | WP_000049795.1 | DUF1064 domain-containing protein | - |
| E1949_RS07430 () | 1497870..1498091 | - | 222 | WP_001123695.1 | DUF3269 family protein | - |
| E1949_RS07435 () | 1498105..1498263 | - | 159 | WP_000256597.1 | hypothetical protein | - |
| E1949_RS07440 () | 1498257..1499036 | - | 780 | WP_000803063.1 | ATP-binding protein | - |
| E1949_RS07445 () | 1499046..1499816 | - | 771 | WP_000190254.1 | conserved phage C-terminal domain-containing protein | - |
| E1949_RS07450 () | 1499882..1500163 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| E1949_RS14270 () | 1500156..1500305 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| E1949_RS07455 () | 1500302..1500973 | - | 672 | WP_001199422.1 | hypothetical protein | - |
| E1949_RS07460 () | 1500986..1501537 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| E1949_RS07465 () | 1501566..1502354 | - | 789 | WP_000134097.1 | ATP-binding protein | - |
| E1949_RS07470 () | 1502347..1502568 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| E1949_RS07475 () | 1502578..1502838 | - | 261 | WP_000291066.1 | DUF1108 family protein | - |
| E1949_RS07480 () | 1502930..1503250 | - | 321 | WP_000219665.1 | hypothetical protein | - |
| E1949_RS07485 () | 1503251..1503418 | - | 168 | WP_001285950.1 | DUF1270 domain-containing protein | - |
| E1949_RS07490 () | 1503430..1503693 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| E1949_RS07495 () | 1503723..1503941 | - | 219 | WP_001038398.1 | hypothetical protein | - |
| E1949_RS07500 () | 1503938..1504264 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| E1949_RS14275 () | 1504341..1504478 | - | 138 | WP_001662405.1 | hypothetical protein | - |
| E1949_RS07505 () | 1504498..1504758 | - | 261 | WP_000435343.1 | hypothetical protein | - |
| E1949_RS07510 () | 1504771..1505568 | - | 798 | WP_001148574.1 | phage antirepressor Ant | - |
| E1949_RS07515 () | 1505584..1505826 | - | 243 | WP_000639925.1 | DUF739 family protein | - |
| E1949_RS07520 () | 1505990..1506706 | + | 717 | WP_001083970.1 | LexA family transcriptional regulator | - |
| E1949_RS07525 () | 1506724..1507167 | + | 444 | WP_000037409.1 | hypothetical protein | - |
| E1949_RS14280 () | 1507198..1507353 | + | 156 | WP_000345951.1 | hypothetical protein | - |
| E1949_RS07530 () | 1507340..1507525 | + | 186 | WP_001089803.1 | hypothetical protein | - |
| E1949_RS07535 () | 1507583..1507786 | - | 204 | WP_000477304.1 | hypothetical protein | - |
| E1949_RS07540 () | 1507814..1508695 | + | 882 | WP_000683724.1 | hypothetical protein | - |
| E1949_RS07545 () | 1508773..1509978 | + | 1206 | WP_000264740.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| E1949_RS07550 () | 1510021..1512048 | - | 2028 | WP_001829176.1 | hypothetical protein | - |
| E1949_RS07555 () | 1512060..1512968 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| E1949_RS07560 () | 1513213..1514964 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| E1949_RS07565 () | 1514945..1515670 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| E1949_RS07570 () | 1515803..1516540 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| E1949_RS07575 () | 1516533..1517075 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| E1949_RS07580 () | 1517068..1517799 | - | 732 | WP_000273375.1 | segregation/condensation protein A | - |
| E1949_RS07585 () | 1517891..1518397 | + | 507 | WP_001183435.1 | DUF309 domain-containing protein | - |
| E1949_RS07590 () | 1518475..1519362 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E1949_RS07595 () | 1519411..1519860 | - | 450 | WP_000392690.1 | transcriptional repressor | - |
| E1949_RS07600 () | 1519965..1520507 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| E1949_RS07605 () | 1520589..1521497 | + | 909 | WP_001171340.1 | aldo/keto reductase | - |
| E1949_RS07610 () | 1521713..1521961 | - | 249 | WP_000995802.1 | hypothetical protein | - |
| E1949_RS07615 () | 1521977..1522732 | - | 756 | WP_000678236.1 | SDR family oxidoreductase | - |
| E1949_RS07620 () | 1522874..1523689 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| E1949_RS07625 () | 1523792..1524712 | - | 921 | WP_000454065.1 | ribonuclease Z | - |
| E1949_RS07630 () | 1525025..1526509 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| E1949_RS07635 () | 1526739..1527605 | + | 867 | WP_001837502.1 | AraC family transcriptional regulator | - |
| E1949_RS07640 () | 1527687..1529336 | - | 1650 | WP_001041917.1 | alpha-glucosidase | - |
| E1949_RS07645 () | 1529352..1530371 | - | 1020 | WP_000256316.1 | HTH-type transcriptional regulator MalR | VF |
| E1949_RS07650 () | 1530372..1530545 | - | 174 | WP_138079948.1 | hypothetical protein | - |
| E1949_RS07655 () | 1530691..1532006 | + | 1316 | Protein_1470 | ISL3 family transposase ISSau8 | Transposase |
| E1949_RS07660 () | 1532070..1532441 | - | 372 | WP_000413427.1 | VOC family protein | - |
| E1949_RS07665 () | 1532660..1534066 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| E1949_RS07670 () | 1534134..1535267 | - | 1134 | WP_000606685.1 | tripeptidase T | - |
| E1949_RS07675 () | 1535530..1535709 | + | 180 | WP_001804902.1 | stressosome-associated protein Prli42 | - |
| E1949_RS07680 () | 1535836..1536816 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| E1949_RS07685 () | 1536830..1537267 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| E1949_RS07690 () | 1537618..1538892 | - | 1275 | WP_000406841.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|