NZ_CP0389281..159159

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 159159 bp
Accession: NZ_CP038928        Location: 1..159159         Organism: Piscirickettsia salmonis strain Psal-013       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
Psal013_RS16375 () 1413..1658 + 246 WP_017377655.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
Psal013_RS16380 () 1655..2041 + 387 WP_017377656.1 type II toxin-antitoxin system VapC family toxin -
Psal013_RS16385 () 2129..2857 + 729 WP_036772434.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16390 () 2836..3456 + 621 WP_080963659.1 ABC transporter permease -
Psal013_RS16395 () 3802..4488 + 687 WP_017377658.1 Fic family protein -
Psal013_RS16400 () 4492..4617 + 126 Protein_6 Tn3 family transposase TnpR_ISPa38 Transposase
Psal013_RS16405 () 4683..5408 - 726 Protein_7 IS6 family transposase ISPsa2 Transposase
Psal013_RS16410 () 5438..5800 - 363 WP_082304501.1 hypothetical protein -
Psal013_RS16415 () 5803..7542 - 1740 WP_016212146.1 Phospholipase D VF
Psal013_RS18660 () 7944..8096 + 153 WP_155046629.1 hypothetical protein -
Psal013_RS16420 () 8124..8663 - 540 WP_196214590.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16425 () 8738..9715 + 978 WP_036771347.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16430 () 9791..9961 + 171 WP_081000019.1 integrase core domain-containing protein -
Psal013_RS16435 () 10002..10730 + 729 WP_048876210.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16440 () 11276..11542 - 267 WP_036771293.1 IS3 family transposase ISLpn8 Transposase
Psal013_RS16445 () 11838..13736 - 1899 WP_036772437.1 DUF1561 family protein -
Psal013_RS16450 () 13816..13938 - 123 Protein_17 IS6 family transposase ISSba18 Transposase
Psal013_RS16455 () 14158..14886 + 729 WP_017377694.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16460 () 14948..15106 + 159 WP_144420842.1 IS3 family transposase -
Psal013_RS16465 () 15523..15687 + 165 WP_155046630.1 hypothetical protein -
Psal013_RS16470 () 15708..16994 + 1287 WP_017375754.1 hypothetical protein -
Psal013_RS16475 () 17177..17905 + 729 WP_036771359.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16480 () 18033..19010 - 978 WP_036771347.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16485 () 19040..19501 - 462 WP_155049765.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16490 () 19609..20100 - 492 WP_069971704.1 DUF1561 family protein -
Psal013_RS16495 () 20182..21159 + 978 WP_036771347.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16500 () 21174..21791 + 618 WP_155049766.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16505 () 21795..22622 + 828 WP_069971703.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16510 () 22649..23110 + 462 Protein_29 tail assembly protein -
Psal013_RS16515 () 23117..23404 - 288 WP_027243212.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
Psal013_RS16520 () 23394..23648 - 255 WP_027243211.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
Psal013_RS16525 () 23866..24027 - 162 WP_155046636.1 hypothetical protein -
Psal013_RS16530 () 24042..25019 - 978 WP_036771347.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16535 () 25038..25271 - 234 WP_062365770.1 hypothetical protein -
Psal013_RS16540 () 25353..26330 + 978 WP_036771347.1 IS5 family transposase ISLlo3 Transposase
Psal013_RS16545 () 26370..26714 + 345 Protein_36 IS6 family transposase ISPsa2 Transposase
Psal013_RS16550 () 26796..27776 - 981 WP_144420849.1 hypothetical protein -
Psal013_RS16555 () 28008..28517 - 510 WP_027242595.1 hypothetical protein -
Psal013_RS16560 () 28557..28919 - 363 WP_027242596.1 hypothetical protein -
Psal013_RS16565 () 29233..30207 - 975 WP_075275482.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS16570 () 30489..30635 - 147 WP_173018589.1 hypothetical protein -
Psal013_RS16575 () 30601..31317 - 717 WP_155049767.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16580 () 31498..34782 - 3285 WP_157894750.1 autotransporter outer membrane beta-barrel domain-containing protein -
Psal013_RS16585 () 34846..35031 - 186 WP_144420848.1 hypothetical protein -
Psal013_RS16590 () 35427..35648 + 222 Protein_45 IS6 family transposase ISSpu17 Transposase
Psal013_RS16595 () 35712..36305 - 594 Protein_46 IS6 family transposase ISPsa2 Transposase
Psal013_RS16600 () 36410..37123 + 714 WP_048876202.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS16605 () 37170..37904 + 735 WP_036771649.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16610 () 37942..38328 - 387 WP_087910668.1 phage portal protein -
Psal013_RS16615 () 38415..38771 - 357 WP_157894751.1 hypothetical protein -
Psal013_RS16620 () 39054..40385 - 1332 WP_048876205.1 terminase large subunit -
Psal013_RS16625 () 40388..40870 - 483 WP_075278733.1 P27 family phage terminase small subunit -
Psal013_RS16630 () 40957..41340 - 384 WP_027242929.1 HNH endonuclease -
Psal013_RS16635 () 41536..41739 - 204 WP_017375952.1 hypothetical protein -
Psal013_RS16640 () 41929..43311 - 1383 WP_027242930.1 hypothetical protein -
Psal013_RS16645 () 43457..43864 - 408 WP_027242931.1 DUF4411 family protein Toxin Detail
Psal013_RS16650 () 43873..44100 - 228 WP_027242932.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
Psal013_RS16655 () 44233..44598 - 366 WP_026063496.1 hypothetical protein -
Psal013_RS16660 () 45477..45806 - 330 WP_162038692.1 HigA family addiction module antidote protein -
Psal013_RS16665 () 45872..46021 + 150 WP_196214251.1 hypothetical protein -
Psal013_RS16670 () 46159..46392 - 234 WP_017375959.1 type II toxin-antitoxin system RelE/ParE family toxin -
Psal013_RS16675 () 46694..47737 + 1044 WP_017375960.1 NAD(P)-dependent alcohol dehydrogenase -
Psal013_RS16680 () 47845..48252 + 408 WP_036817201.1 AAA family ATPase -
Psal013_RS16685 () 48556..49551 + 996 WP_036817204.1 hypothetical protein -
Psal013_RS16690 () 49822..50247 + 426 WP_017375964.1 hypothetical protein -
Psal013_RS16695 () 50198..50716 + 519 WP_155048090.1 hypothetical protein -
Psal013_RS16700 () 50861..51427 + 567 WP_017375966.1 HAMP domain-containing histidine kinase -
Psal013_RS16705 () 51428..52903 + 1476 WP_048876207.1 response regulator -
Psal013_RS16710 () 53409..53639 - 231 WP_144420845.1 hypothetical protein -
Psal013_RS16715 () 53767..54219 - 453 WP_027242936.1 hypothetical protein -
Psal013_RS16720 () 54216..54434 - 219 WP_027242937.1 hypothetical protein -
Psal013_RS16725 () 54741..54950 - 210 WP_017375841.1 hypothetical protein -
Psal013_RS16730 () 55395..55703 - 309 WP_017375972.1 helix-turn-helix domain-containing protein -
Psal013_RS16735 () 55705..56073 - 369 WP_027242938.1 type II toxin-antitoxin system RelE/ParE family toxin -
Psal013_RS16740 () 56487..57551 - 1065 WP_174872554.1 IS91 family transposase ISVsa9 Transposase
Psal013_RS18665 () 57731..57910 - 180 WP_157894752.1 hypothetical protein -
Psal013_RS16750 () 58323..59150 + 828 WP_048876208.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS16755 () 59193..59922 - 730 Protein_78 IS6 family transposase ISPsa2 Transposase
Psal013_RS16760 () 60004..60474 - 471 WP_036771289.1 hypothetical protein -
Psal013_RS16765 () 61124..61300 - 177 Protein_80 IS30 family transposase ISAs2 Transposase
Psal013_RS16770 () 61368..61511 - 144 WP_155046633.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16775 () 61773..62384 - 612 Protein_82 IS6 family transposase ISPsa2 Transposase
Psal013_RS16780 () 62718..63254 - 537 WP_075275480.1 DUF1353 domain-containing protein -
Psal013_RS18670 () 63292..63459 + 168 WP_169834792.1 hypothetical protein -
Psal013_RS16785 () 63671..64447 - 777 WP_017375850.1 N-acetylmuramoyl-L-alanine amidase -
Psal013_RS16790 () 64808..65536 + 729 WP_036771279.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16795 () 65606..65806 + 201 WP_155046634.1 transposase zinc-binding domain-containing protein -
Psal013_RS16800 () 65725..66696 + 972 WP_048876229.1 IS91 family transposase ISVsa9 Transposase
Psal013_RS16805 () 67266..67994 - 729 WP_017375910.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16810 () 68070..68342 - 273 WP_036772441.1 Txe/YoeB family addiction module toxin Toxin Detail
Psal013_RS16815 () 68346..68606 - 261 WP_032126795.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
Psal013_RS16820 () 68946..69110 + 165 Protein_92 IS6 family transposase ISPsa2 Transposase
Psal013_RS16825 () 69396..69962 + 567 Protein_93 IS6 family transposase ISPsa2 Transposase
Psal013_RS16830 () 69965..70396 - 432 Protein_94 IS6 family transposase ISPsa2 Transposase
Psal013_RS16835 () 70785..71048 - 264 Protein_95 IS6 family transposase ISPsa2 Transposase
Psal013_RS16840 () 71128..72255 - 1128 WP_036772450.1 hypothetical protein -
Psal013_RS16845 () 72782..73681 + 900 Protein_97 IS30 family transposase ISPlu1 Transposase
Psal013_RS16850 () 73717..73878 - 162 Protein_98 IS6 family transposase ISSod8 Transposase
Psal013_RS16855 () 74069..75091 + 1023 WP_027243215.1 hypothetical protein -
Psal013_RS16860 () 75164..75505 + 342 Protein_100 IS6 family transposase ISPsa2 Transposase
Psal013_RS16865 () 75574..76302 - 729 WP_036774350.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16870 () 76372..76977 + 606 Protein_102 IS982 family transposase ISPsa1 Transposase
Psal013_RS16875 () 77260..77430 + 171 Protein_103 IS982 family transposase -
Psal013_RS16880 () 77542..78075 + 534 WP_048876194.1 phage portal protein -
Psal013_RS16885 () 78256..78756 + 501 WP_155049768.1 phage portal protein -
Psal013_RS16890 () 78829..80694 - 1866 WP_027243206.1 RecX family transcriptional regulator -
Psal013_RS16895 () 80862..81146 + 285 WP_047927778.1 IS3 family transposase IS1302 Transposase
Psal013_RS16900 () 81205..81426 + 222 Protein_108 IS6 family transposase ISSpu17 Transposase
Psal013_RS16905 () 81490..82218 - 729 WP_017375910.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16910 () 82300..82791 - 492 WP_155046637.1 hypothetical protein -
Psal013_RS16915 () 83131..83520 - 390 Protein_111 IS6 family transposase ISPsa2 Transposase
Psal013_RS16930 () 84745..85098 - 354 Protein_113 IS6 family transposase ISPsa2 Transposase
Psal013_RS16935 () 85303..85731 + 429 WP_048876191.1 HI0074 family nucleotidyltransferase substrate-binding subunit -
Psal013_RS16940 () 85724..86053 + 330 WP_048876190.1 nucleotidyltransferase domain-containing protein -
Psal013_RS16945 () 86083..86811 + 729 WP_017377694.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16950 () 86823..86972 - 150 WP_017375663.1 IS3 family transposase ISPin3 Transposase
Psal013_RS16955 () 87219..87947 - 729 WP_017377694.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS16960 () 88018..88452 + 435 Protein_119 IS30 family transposase ISAs2 Transposase
Psal013_RS16965 () 88488..88799 - 312 Protein_120 IS30 family transposase ISBlo4 Transposase
Psal013_RS16970 () 89325..90275 - 951 WP_027242593.1 tyrosine-type recombinase/integrase -
Psal013_RS16975 () 90311..90640 - 330 WP_027242592.1 hypothetical protein -
Psal013_RS16980 () 90707..91747 - 1041 WP_036774385.1 DNA-binding protein -
Psal013_RS16985 () 91761..91952 - 192 WP_144420833.1 hypothetical protein -
Psal013_RS16990 () 92157..92726 - 570 WP_036774378.1 hypothetical protein -
Psal013_RS16995 () 92769..93068 - 300 WP_036774316.1 nucleotidyltransferase domain-containing protein -
Psal013_RS17000 () 93065..93493 - 429 WP_036774376.1 nucleotidyltransferase substrate binding protein -
Psal013_RS17005 () 93803..94531 + 729 WP_036774373.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17010 () 94705..95361 + 657 Protein_129 IS30 family transposase ISPlu1 Transposase
Psal013_RS17015 () 95650..95967 + 318 Protein_130 IS30 family transposase ISSba10 Transposase
Psal013_RS17020 () 96192..97127 - 936 WP_027243202.1 hypothetical protein -
Psal013_RS17025 () 97402..98130 + 729 WP_017375910.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17030 () 98296..98535 - 240 WP_027243201.1 hypothetical protein -
Psal013_RS17035 () 98599..99681 + 1083 WP_155049769.1 SWIM zinc finger family protein -
Psal013_RS17040 () 99952..102228 + 2277 WP_155049770.1 DEAD/DEAH box helicase -
Psal013_RS17045 () 102386..103114 - 729 WP_036772541.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17050 () 103540..103803 + 264 Protein_137 IS30 family transposase ISSba10 Transposase
Psal013_RS17055 () 103856..104584 + 729 WP_036815648.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17060 () 105068..105796 + 729 WP_036772541.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17065 () 105967..106536 - 570 WP_027243197.1 Tn3 family transposase ISPsy42 Transposase
Psal013_RS17070 () 106541..107236 - 696 WP_027243198.1 Fic family protein -
Psal013_RS17075 () 107376..108104 - 729 WP_036772541.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17080 () 108123..108341 - 219 WP_080963627.1 nucleotidyltransferase domain-containing protein -
Psal013_RS17085 () 108638..109135 + 498 Protein_144 IS6 family transposase ISPsa2 Transposase
Psal013_RS17090 () 109321..110382 - 1062 WP_036774644.1 hypothetical protein -
Psal013_RS17095 () 110891..111637 + 747 WP_047927488.1 AAA family ATPase -
Psal013_RS17100 () 111638..112042 + 405 WP_027243200.1 hypothetical protein -
Psal013_RS17105 () 112349..113323 + 975 WP_036771330.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS17110 () 113360..113605 + 246 Protein_149 IS6 family transposase -
Psal013_RS17115 () 113863..114129 - 267 WP_036771293.1 IS3 family transposase ISLpn8 Transposase
Psal013_RS17120 () 114425..116323 - 1899 WP_036772437.1 DUF1561 family protein -
Psal013_RS17125 () 116403..116525 - 123 Protein_152 IS6 family transposase ISSba18 Transposase
Psal013_RS17130 () 116679..118574 + 1896 WP_036771296.1 DUF1561 family protein -
Psal013_RS17135 () 118652..118816 + 165 Protein_154 IS6 family transposase ISPsa2 Transposase
Psal013_RS18675 () 119103..119183 + 81 Protein_155 IS6 family transposase ISPsa2 Transposase
Psal013_RS17140 () 119274..119609 + 336 WP_017375632.1 IS3 family transposase ISMasp3 Transposase
Psal013_RS17145 () 119804..120007 + 204 WP_017375836.1 hypothetical protein -
Psal013_RS17150 () 120101..120895 + 795 WP_027243203.1 DNA/RNA non-specific endonuclease -
Psal013_RS17155 () 120994..121722 + 729 Protein_159 IS6 family transposase ISPsa2 Transposase
Psal013_RS17160 () 121851..122195 - 345 WP_155049771.1 hypothetical protein -
Psal013_RS18680 () 122377..122520 + 144 WP_196214589.1 hypothetical protein -
Psal013_RS17175 () 123594..123920 - 327 Protein_162 hypothetical protein -
Psal013_RS17185 () 125360..126763 + 1404 WP_080999971.1 IS4 family transposase ISArch10 Transposase
Psal013_RS17190 () 126879..126983 - 105 Protein_164 IS6 family transposase -
Psal013_RS17195 () 127028..127279 - 252 WP_081000017.1 DDE-type integrase/transposase/recombinase -
Psal013_RS17200 () 127477..127647 - 171 Protein_166 IS6 family transposase IS2020 Transposase
Psal013_RS17205 () 127680..128654 - 975 WP_048875857.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS17210 () 128883..129329 - 447 Protein_168 phage portal protein -
Psal013_RS18685 () 129265..129504 + 240 WP_075278737.1 hypothetical protein -
Psal013_RS17220 () 129642..130097 - 456 WP_048876221.1 phage portal protein -
Psal013_RS17225 () 130192..130653 - 462 WP_016212398.1 hypothetical protein -
Psal013_RS17235 () 131270..131755 + 486 Protein_172 IS6 family transposase ISPsa2 Transposase
Psal013_RS17240 () 131821..132384 - 564 Protein_173 IS30 family transposase ISPlu1 Transposase
Psal013_RS17245 () 132714..134786 + 2073 WP_036773695.1 S9 family peptidase -
Psal013_RS17250 () 134816..135544 + 729 WP_017377509.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17255 () 135686..136618 + 933 WP_144420837.1 hypothetical protein -
Psal013_RS17260 () 136648..137376 + 729 WP_017377511.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17265 () 137379..137651 - 273 WP_017377512.1 Serine/threonine-protein kinase B VF
Psal013_RS17270 () 137769..138437 - 669 Protein_179 IS30 family transposase IS4351 Transposase
Psal013_RS17275 () 138502..139230 - 729 WP_017377511.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17280 () 139286..139906 + 621 WP_144420838.1 pentapeptide repeat-containing protein -
Psal013_RS17285 () 140027..140326 + 300 Protein_182 IS6 family transposase -
Psal013_RS17290 () 140361..140987 - 627 Protein_183 IS30 family transposase IS4351 Transposase
Psal013_RS17295 () 141055..141783 - 729 WP_017375910.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17300 () 142003..142905 + 903 WP_162038694.1 IS701 family transposase ISMhu9 Transposase
Psal013_RS17305 () 142999..143586 + 588 Protein_186 IS6 family transposase ISPsa2 Transposase
Psal013_RS17310 () 143575..143745 - 171 WP_017377667.1 hypothetical protein -
Psal013_RS17315 () 143890..144147 - 258 WP_017377666.1 hypothetical protein -
Psal013_RS17320 () 144824..144928 - 105 Protein_189 IS6 family transposase -
Psal013_RS17325 () 144995..145330 - 336 Protein_190 IS6 family transposase ISPsa2 Transposase
Psal013_RS17330 () 145619..146011 - 393 Protein_191 IS6 family transposase ISPsa2 Transposase
Psal013_RS17335 () 146048..146503 - 456 WP_036815609.1 IS4 family transposase ISArch10 Transposase
Psal013_RS17340 () 146747..147145 - 399 WP_036816769.1 putative toxin-antitoxin system toxin component, PIN family -
Psal013_RS17345 () 147142..147405 - 264 WP_047927763.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
Psal013_RS17350 () 147787..148026 + 240 WP_080963666.1 transposase zinc-binding domain-containing protein -
Psal013_RS17355 () 147951..148913 + 963 WP_036773142.1 IS91 family transposase ISVsa9 Transposase
Psal013_RS17360 () 149239..150285 + 1047 WP_027243195.1 hypothetical protein -
Psal013_RS17365 () 150651..151625 - 975 WP_036773116.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS17370 () 151769..152002 + 234 WP_017375692.1 helix-turn-helix domain-containing protein -
Psal013_RS17375 () 152026..152727 + 702 WP_017375691.1 AAA family ATPase -
Psal013_RS17380 () 152711..153028 + 318 WP_036773107.1 hypothetical protein -
Psal013_RS17385 () 153316..154020 + 705 WP_048876211.1 IS30 family transposase ISPlu1 Transposase
Psal013_RS17390 () 154032..154760 - 729 WP_036772541.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17395 () 154790..155179 - 390 WP_051929563.1 Tn3 family transposase TnpR_ISArsp6 Transposase
Psal013_RS17400 () 155202..155930 + 729 WP_017375910.1 IS6 family transposase ISPsa2 Transposase
Psal013_RS17405 () 155933..156541 - 609 WP_036815979.1 IS30 family transposase IS1655 Transposase
Psal013_RS17410 () 156988..157137 + 150 WP_162287778.1 hypothetical protein -
Psal013_RS17415 () 157130..157468 - 339 WP_027243184.1 hypothetical protein -
Psal013_RS17420 () 157482..157934 - 453 WP_017375839.1 hypothetical protein -
Psal013_RS17425 () 157931..158149 - 219 WP_017375840.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance