MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75328 bp
Accession: NZ_CP038392 Location: 1..75328 Organism: Escherichia coli O157:H7 strain DEC5B Replicon: plasmid pDEC5B-4
Accession: NZ_CP038392 Location: 1..75328 Organism: Escherichia coli O157:H7 strain DEC5B Replicon: plasmid pDEC5B-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3156_RS25810 () | 302..955 | + | 654 | WP_000796224.1 | hypothetical protein | - |
| E3156_RS25815 () | 1019..1453 | + | 435 | WP_000429590.1 | hypothetical protein | - |
| E3156_RS25820 () | 1450..2232 | + | 783 | WP_001418814.1 | site-specific integrase | - |
| E3156_RS25825 () | 2689..2946 | + | 258 | WP_000527007.1 | hypothetical protein | - |
| E3156_RS25830 () | 3041..3490 | - | 450 | WP_050553036.1 | hypothetical protein | - |
| E3156_RS25840 () | 4663..5081 | - | 419 | Protein_7 | helix-turn-helix domain-containing protein | - |
| E3156_RS25845 () | 5273..5407 | + | 135 | Protein_8 | IS1 family transposase | - |
| E3156_RS25850 () | 5529..6149 | - | 621 | WP_096837492.1 | T3SS effector NleG family protein | - |
| E3156_RS25855 () | 6564..6713 | - | 150 | Protein_10 | transposase domain-containing protein | - |
| E3156_RS25860 () | 6806..7016 | + | 211 | Protein_11 | IS110 family transposase | - |
| E3156_RS25865 () | 7088..8104 | + | 1017 | Protein_12 | IS3 family transposase | - |
| E3156_RS25870 () | 8136..9330 | - | 1195 | Protein_13 | transposase | - |
| E3156_RS25875 () | 9338..9766 | + | 429 | Protein_14 | IS200/IS605 family transposase | - |
| E3156_RS25880 () | 9919..10659 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| E3156_RS25885 () | 10981..11320 | + | 340 | Protein_16 | epoxyqueuosine reductase QueH | - |
| E3156_RS25890 () | 12090..12309 | + | 220 | Protein_17 | IS200/IS605 family transposase | - |
| E3156_RS25895 () | 12713..12913 | + | 201 | WP_157909925.1 | hypothetical protein | - |
| E3156_RS25900 () | 13133..13279 | + | 147 | Protein_19 | IS3 family transposase | - |
| E3156_RS25905 () | 13793..14095 | + | 303 | WP_032176921.1 | hypothetical protein | - |
| E3156_RS25910 () | 14343..14693 | + | 351 | Protein_21 | hypothetical protein | - |
| E3156_RS25915 () | 14694..15021 | - | 328 | Protein_22 | helix-turn-helix domain-containing protein | - |
| E3156_RS25920 () | 15220..15867 | + | 648 | WP_122993454.1 | T3SS effector NleG family protein | - |
| E3156_RS25925 () | 16223..16378 | + | 156 | Protein_24 | transposase | - |
| E3156_RS25930 () | 16467..17048 | + | 582 | WP_001119620.1 | T3SS effector guanine exchange factor EspT | - |
| E3156_RS25935 () | 17701..17913 | + | 213 | Protein_26 | group II intron reverse transcriptase/maturase | - |
| E3156_RS25940 () | 17915..18433 | + | 519 | WP_077631143.1 | hypothetical protein | - |
| E3156_RS25945 () | 18830..20058 | + | 1229 | WP_106377009.1 | IS3 family transposase | - |
| E3156_RS25950 () | 20173..20442 | - | 270 | WP_029785643.1 | hypothetical protein | - |
| E3156_RS25955 () | 22330..22587 | - | 258 | WP_001418855.1 | ribbon-helix-helix domain-containing protein | - |
| E3156_RS25960 () | 23648..24505 | - | 858 | WP_000131019.1 | incFII family plasmid replication initiator RepA | - |
| E3156_RS25965 () | 24498..24572 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| E3156_RS25970 () | 24805..25062 | - | 258 | WP_000078114.1 | replication regulatory protein RepA | - |
| E3156_RS25975 () | 25372..25854 | - | 483 | WP_000405244.1 | GNAT family N-acetyltransferase | Toxin Detail |
| E3156_RS25980 () | 25845..26147 | - | 303 | WP_001346256.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| E3156_RS25985 () | 26469..26618 | - | 150 | WP_064717443.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 26663..26722 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26663..26722 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26663..26722 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26663..26722 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| E3156_RS25990 () | 26981..27112 | - | 132 | WP_001418856.1 | hypothetical protein | - |
| E3156_RS25995 () | 27297..27509 | - | 213 | WP_032320915.1 | hypothetical protein | - |
| E3156_RS26000 () | 27639..28199 | - | 561 | WP_096837425.1 | fertility inhibition protein FinO | - |
| E3156_RS26005 () | 28254..28994 | - | 741 | WP_000206157.1 | conjugal transfer pilus acetylase TraX | - |
| E3156_RS26010 () | 29014..30720 | - | 1707 | Protein_41 | conjugative transfer relaxase/helicase TraI | - |
| E3156_RS26015 () | 30759..31972 | + | 1214 | WP_085947772.1 | IS3 family transposase | - |
| E3156_RS26020 () | 31976..32242 | - | 267 | WP_096837424.1 | conjugal transfer protein TraB | - |
| E3156_RS26025 () | 32242..32946 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| E3156_RS26030 () | 32957..33523 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| E3156_RS26035 () | 33545..33856 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3156_RS26040 () | 33871..34236 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| E3156_RS26045 () | 34270..34497 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| E3156_RS26050 () | 34592..35278 | - | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| E3156_RS26055 () | 35472..35855 | - | 384 | WP_000124982.1 | relaxosome protein TraM | - |
| E3156_RS26060 () | 36166..36768 | + | 603 | WP_096837423.1 | transglycosylase SLT domain-containing protein | - |
| E3156_RS26065 () | 37064..37885 | - | 822 | WP_137445206.1 | DUF945 domain-containing protein | - |
| E3156_RS26070 () | 38004..38291 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| E3156_RS26075 () | 38550..39009 | + | 460 | Protein_54 | hypothetical protein | - |
| E3156_RS26080 () | 39095..39658 | - | 564 | WP_001346267.1 | class I SAM-dependent methyltransferase | - |
| E3156_RS26085 () | 39705..41066 | - | 1362 | WP_096837421.1 | DUF3560 domain-containing protein | - |
| E3156_RS26090 () | 41118..41348 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| E3156_RS26095 () | 41832..42204 | - | 373 | Protein_58 | hypothetical protein | - |
| E3156_RS26100 () | 42323..42514 | - | 192 | WP_001027488.1 | hypothetical protein | - |
| E3156_RS26105 () | 42511..42933 | - | 423 | WP_000271728.1 | DUF1380 family protein | - |
| E3156_RS26110 () | 42980..43282 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| E3156_RS26115 () | 43378..43707 | - | 330 | Protein_62 | DUF1472 domain-containing protein | - |
| E3156_RS26120 () | 43809..44696 | - | 888 | WP_000066222.1 | RepB family plasmid replication initiator protein | - |
| E3156_RS26125 () | 45177..45599 | + | 423 | WP_000600198.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3156_RS26130 () | 45599..46873 | + | 1275 | WP_000457546.1 | Y-family DNA polymerase | - |
| E3156_RS26135 () | 46956..47279 | - | 324 | WP_000143875.1 | hypothetical protein | - |
| E3156_RS26140 () | 47276..47713 | - | 438 | WP_000843285.1 | hypothetical protein | - |
| E3156_RS26145 () | 47713..48744 | - | 1032 | WP_001085425.1 | ParB/RepB/Spo0J family partition protein | - |
| E3156_RS26150 () | 48744..49610 | - | 867 | WP_000172786.1 | AAA family ATPase | - |
| E3156_RS26155 () | 49996..50535 | - | 540 | WP_001218555.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| E3156_RS26160 () | 50759..51010 | + | 252 | WP_001120171.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3156_RS26165 () | 51007..51294 | + | 288 | WP_000222786.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3156_RS26170 () | 51457..51654 | - | 198 | WP_077631139.1 | AraC family transcriptional regulator | - |
| E3156_RS26175 () | 51750..52897 | + | 1148 | WP_085949497.1 | IS3 family transposase | - |
| E3156_RS26180 () | 52917..53333 | + | 417 | Protein_75 | IS630 family transposase | - |
| E3156_RS26185 () | 53670..57611 | + | 3942 | WP_171881654.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| E3156_RS26190 () | 57692..58162 | + | 471 | WP_071782130.1 | EspF protein | - |
| E3156_RS26195 () | 58454..59488 | + | 1035 | Protein_78 | transposase | - |
| E3156_RS26200 () | 59493..60622 | - | 1130 | Protein_79 | IS3 family transposase | - |
| E3156_RS26205 () | 60692..61028 | - | 337 | Protein_80 | transposase | - |
| E3156_RS26210 () | 61353..61786 | - | 434 | Protein_81 | hypothetical protein | - |
| E3156_RS26215 () | 62003..62326 | - | 324 | WP_122993459.1 | hypothetical protein | - |
| E3156_RS26220 () | 62473..62718 | - | 246 | WP_114484882.1 | hypothetical protein | - |
| E3156_RS26225 () | 62979..63293 | + | 315 | WP_000638654.1 | PerC family transcriptional regulator | - |
| E3156_RS26230 () | 63344..63973 | - | 630 | Protein_85 | IS3 family transposase | - |
| E3156_RS26235 () | 64051..64542 | + | 492 | Protein_86 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| E3156_RS26240 () | 64713..65345 | - | 633 | WP_024183519.1 | bfpT-regulated chaperone | - |
| E3156_RS26245 () | 65516..66157 | + | 642 | WP_001144872.1 | T3SS effector NleG family protein | - |
| E3156_RS26250 () | 66383..66796 | - | 414 | Protein_89 | DDE-type integrase/transposase/recombinase | - |
| E3156_RS26255 () | 66901..67017 | + | 117 | Protein_90 | helix-turn-helix domain-containing protein | - |
| E3156_RS26260 () | 67078..67857 | - | 780 | WP_024183521.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| E3156_RS26265 () | 67857..68879 | - | 1023 | WP_001418841.1 | IS21 family transposase | - |
| E3156_RS26270 () | 68892..69954 | + | 1063 | Protein_93 | IS21 family transposase | - |
| E3156_RS26275 () | 69911..70387 | + | 477 | Protein_94 | helix-turn-helix domain-containing protein | - |
| E3156_RS26280 () | 71180..71767 | + | 588 | WP_000905842.1 | serine acetyltransferase | - |
| E3156_RS26285 () | 72053..72376 | - | 324 | WP_077631138.1 | proQ/FINO family protein | - |
| E3156_RS26290 () | 72619..72812 | + | 194 | Protein_97 | hypothetical protein | - |
| E3156_RS26295 () | 73878..74468 | - | 591 | WP_000194565.1 | hypothetical protein | - |
| E3156_RS26300 () | 74468..74725 | - | 258 | WP_000343097.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|