MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152258 bp
Accession: NZ_CP036516 Location: 1..152258 Organism: Lichenihabitans psoromatis strain PAMC 29148 Replicon: plasmid p_unnamed1
Accession: NZ_CP036516 Location: 1..152258 Organism: Lichenihabitans psoromatis strain PAMC 29148 Replicon: plasmid p_unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EY713_RS21600 () | 1193..2194 | + | 1002 | WP_131120336.1 | ABC transporter permease | - |
| EY713_RS21605 () | 2201..3136 | + | 936 | WP_131120085.1 | ABC transporter permease | - |
| EY713_RS21610 () | 3183..4070 | + | 888 | WP_131120293.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| EY713_RS21615 () | 4132..4656 | - | 525 | WP_131120295.1 | redoxin domain-containing protein | - |
| EY713_RS21620 () | 4704..5327 | + | 624 | WP_131120087.1 | TetR family transcriptional regulator | - |
| EY713_RS21625 () | 5506..6402 | - | 897 | WP_131120089.1 | HTH-type transcriptional regulator PgrR | VF |
| EY713_RS21630 () | 6504..7313 | + | 810 | WP_131120091.1 | Glucose 1-dehydrogenase | VF |
| EY713_RS21635 () | 7622..8503 | - | 882 | WP_165491242.1 | LysR family transcriptional regulator | - |
| EY713_RS21640 () | 8644..11046 | + | 2403 | WP_165491243.1 | FAD-dependent oxidoreductase | - |
| EY713_RS21645 () | 11043..12509 | + | 1467 | WP_131120097.1 | aldehyde dehydrogenase family protein | - |
| EY713_RS21650 () | 12586..13866 | + | 1281 | WP_131120099.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| EY713_RS21655 () | 13936..14319 | + | 384 | WP_131120101.1 | carboxymuconolactone decarboxylase family protein | - |
| EY713_RS21660 () | 14528..15268 | + | 741 | WP_165491255.1 | L-cystine import ATP-binding protein TcyC | VF |
| EY713_RS21665 () | 15265..15909 | + | 645 | WP_131120105.1 | amino acid ABC transporter permease | - |
| EY713_RS21670 () | 15906..16565 | + | 660 | WP_131120107.1 | amino acid ABC transporter permease | - |
| EY713_RS21675 () | 16616..17452 | + | 837 | WP_131120109.1 | transporter substrate-binding domain-containing protein | - |
| EY713_RS21680 () | 17700..18518 | - | 819 | WP_131120111.1 | IS21 family transposase ISRel5 | Transposase |
| EY713_RS21685 () | 18515..19978 | - | 1464 | Protein_18 | IS21 family transposase ISBj11 | Transposase |
| EY713_RS21690 () | 20266..21222 | - | 957 | Protein_19 | ExeA family protein | - |
| EY713_RS21700 () | 21516..22184 | - | 669 | WP_131120113.1 | NAD(P)H-binding protein | - |
| EY713_RS21705 () | 22181..23074 | - | 894 | WP_131120114.1 | SDR family oxidoreductase | - |
| EY713_RS21710 () | 23108..23674 | - | 567 | WP_131120116.1 | TetR/AcrR family transcriptional regulator | - |
| EY713_RS21720 () | 24094..25228 | + | 1135 | Protein_23 | IS3 family transposase ISBj3 | Transposase |
| EY713_RS21725 () | 25204..26472 | + | 1269 | WP_131120120.1 | sugar ABC transporter substrate-binding protein | - |
| EY713_RS21730 () | 27456..27971 | - | 516 | WP_131120297.1 | TetR/AcrR family transcriptional regulator | - |
| EY713_RS21735 () | 28212..29162 | + | 951 | WP_131120299.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| EY713_RS21740 () | 29078..29527 | - | 450 | WP_131120123.1 | hypothetical protein | - |
| EY713_RS21745 () | 30094..30993 | + | 900 | WP_131120125.1 | hypothetical protein | - |
| EY713_RS21750 () | 31025..32398 | + | 1374 | WP_131120127.1 | DUF2272 domain-containing protein | - |
| EY713_RS21755 () | 32432..33268 | + | 837 | WP_131120128.1 | hypothetical protein | - |
| EY713_RS21760 () | 33579..34067 | + | 489 | WP_165491244.1 | transporter substrate-binding domain-containing protein | - |
| EY713_RS21765 () | 34101..34253 | + | 153 | Protein_32 | IS3 family transposase ISMdi5 | Transposase |
| EY713_RS21770 () | 34261..34830 | - | 570 | WP_131120301.1 | TetR/AcrR family transcriptional regulator | - |
| EY713_RS21775 () | 35001..35753 | + | 753 | WP_131120132.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| EY713_RS21780 () | 35945..36658 | + | 714 | WP_131120134.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EY713_RS22900 () | 36651..36815 | + | 165 | WP_165491245.1 | hypothetical protein | - |
| EY713_RS21785 () | 36884..37678 | - | 795 | WP_131120135.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| EY713_RS21790 () | 37803..38237 | + | 435 | WP_131120137.1 | helix-turn-helix transcriptional regulator | - |
| EY713_RS22905 () | 38595..38909 | + | 315 | WP_165491241.1 | IS3 family transposase ISMex7 | Transposase |
| EY713_RS21795 () | 39020..40146 | + | 1127 | WP_131120303.1 | IS3 family transposase ISPmar2 | Transposase |
| EY713_RS21800 () | 40324..40611 | + | 288 | WP_131120139.1 | NAD(P)H-dependent oxidoreductase | - |
| EY713_RS21805 () | 40608..41900 | - | 1293 | WP_131120141.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| EY713_RS22910 () | 42198..43235 | - | 1038 | WP_165491246.1 | M20/M25/M40 family metallo-hydrolase | - |
| EY713_RS21820 () | 43250..43939 | - | 690 | WP_131120145.1 | DUF1028 domain-containing protein | - |
| EY713_RS21825 () | 44738..45481 | - | 744 | WP_131120305.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| EY713_RS21830 () | 45481..46371 | - | 891 | WP_170314128.1 | amino acid ABC transporter permease | - |
| EY713_RS21835 () | 46632..47468 | - | 837 | WP_131120309.1 | ABC transporter substrate-binding protein | - |
| EY713_RS21840 () | 47525..48412 | - | 888 | WP_131120147.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| EY713_RS21845 () | 48415..49281 | - | 867 | WP_131120311.1 | formyltetrahydrofolate deformylase | - |
| EY713_RS21850 () | 49585..50736 | - | 1152 | WP_131120149.1 | glycine cleavage system protein T | - |
| EY713_RS21855 () | 51139..52092 | + | 954 | WP_131120151.1 | methylenetetrahydrofolate reductase | - |
| EY713_RS21860 () | 52135..53616 | + | 1482 | WP_165491247.1 | FAD-binding oxidoreductase | - |
| EY713_RS21865 () | 53628..54815 | + | 1188 | WP_131120155.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| EY713_RS21870 () | 54882..55775 | - | 894 | WP_131120156.1 | ABC transporter permease | - |
| EY713_RS21875 () | 55762..56592 | - | 831 | WP_131120313.1 | ABC transporter permease | - |
| EY713_RS21880 () | 56673..57746 | - | 1074 | WP_131120158.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| EY713_RS21885 () | 57880..58977 | - | 1098 | WP_165491248.1 | extracellular solute-binding protein | - |
| EY713_RS21890 () | 59515..60288 | + | 774 | WP_131120162.1 | Transcriptional repressor IclR | VF |
| EY713_RS21895 () | 60285..61382 | + | 1098 | WP_131120164.1 | DUF917 family protein | - |
| EY713_RS21900 () | 61379..61990 | + | 612 | WP_131120166.1 | glutathione S-transferase family protein | - |
| EY713_RS21905 () | 62077..63363 | + | 1287 | WP_131120168.1 | N-carbamoyl-L-amino acid hydrolase | VF |
| EY713_RS21910 () | 63363..65003 | + | 1641 | WP_131120170.1 | urocanate hydratase | - |
| EY713_RS21915 () | 65074..66606 | + | 1533 | WP_131120172.1 | histidine ammonia-lyase | - |
| EY713_RS21920 () | 66707..68077 | + | 1371 | WP_131120174.1 | amidohydrolase family protein | - |
| EY713_RS21925 () | 68226..68918 | + | 693 | WP_165491249.1 | HTH-type quorum sensing-dependent transcriptional regulator RpaR | VF |
| EY713_RS21930 () | 69900..70097 | + | 198 | WP_131120178.1 | IS21 family transposase ISBj11 | Transposase |
| EY713_RS22915 () | 69999..70601 | - | 603 | Protein_67 | IS21 family transposase ISBj11 | Transposase |
| EY713_RS21935 () | 70716..72269 | + | 1554 | Protein_68 | ISL3 family transposase ISMex26 | Transposase |
| EY713_RS21940 () | 72613..74928 | - | 2316 | WP_131120180.1 | hypothetical protein | Relaxase |
| EY713_RS21945 () | 74925..75356 | - | 432 | WP_131120315.1 | hypothetical protein | - |
| EY713_RS21950 () | 75920..76621 | + | 702 | WP_131120182.1 | Chromosome-partitioning ATPase Soj | VF |
| EY713_RS21955 () | 76618..77034 | + | 417 | WP_131120184.1 | hypothetical protein | - |
| EY713_RS21960 () | 77226..77597 | + | 372 | WP_131120186.1 | helix-turn-helix domain-containing protein | - |
| EY713_RS21965 () | 77763..78083 | - | 321 | WP_131120188.1 | DUF736 family protein | - |
| EY713_RS21970 () | 78641..79870 | - | 1230 | WP_131120190.1 | replication initiation protein RepC | - |
| EY713_RS21975 () | 80091..81110 | - | 1020 | WP_131120192.1 | plasmid partitioning protein RepB | - |
| EY713_RS21980 () | 81113..82318 | - | 1206 | WP_131120194.1 | Sporulation initiation inhibitor protein Soj | VF |
| EY713_RS21985 () | 82754..83074 | - | 321 | WP_131120188.1 | DUF736 family protein | - |
| EY713_RS21990 () | 83592..84026 | - | 435 | WP_131120196.1 | PIN domain-containing protein | Toxin Detail |
| EY713_RS21995 () | 84023..84250 | - | 228 | WP_131120198.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EY713_RS22000 () | 84336..85265 | - | 930 | WP_170314124.1 | DUF2493 domain-containing protein | - |
| EY713_RS22005 () | 85618..86682 | - | 1065 | WP_131120317.1 | toprim domain-containing protein | - |
| EY713_RS22010 () | 86695..91053 | - | 4359 | WP_131120202.1 | strawberry notch family protein | - |
| EY713_RS22015 () | 91264..93378 | - | 2115 | WP_131120204.1 | ParB/RepB/Spo0J family partition protein | - |
| EY713_RS22020 () | 93719..94013 | + | 295 | Protein_85 | hypothetical protein | - |
| EY713_RS22025 () | 94237..94488 | + | 252 | WP_131120206.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EY713_RS22030 () | 94497..94889 | + | 393 | WP_131120208.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EY713_RS22035 () | 95296..96248 | - | 953 | Protein_88 | DUF1738 domain-containing protein | - |
| EY713_RS22040 () | 96705..97037 | + | 333 | WP_131120319.1 | MbcA/ParS/Xre antitoxin family protein | - |
| EY713_RS22045 () | 97034..97567 | + | 534 | WP_131120210.1 | RES domain-containing protein | - |
| EY713_RS22050 () | 98368..99564 | - | 1197 | WP_165491250.1 | IS701 family transposase ISMmg4 | Transposase |
| EY713_RS22060 () | 101655..102257 | + | 603 | WP_131120321.1 | recombinase family protein | - |
| EY713_RS22065 () | 102483..102731 | + | 249 | WP_131120214.1 | hypothetical protein | - |
| EY713_RS22070 () | 102996..104315 | - | 1320 | WP_131120216.1 | APC family permease | - |
| EY713_RS22075 () | 104418..105536 | - | 1119 | WP_131120217.1 | metallophosphoesterase | - |
| EY713_RS22920 () | 106229..106399 | - | 171 | WP_165491251.1 | hypothetical protein | - |
| EY713_RS22080 () | 106746..107015 | + | 270 | WP_131120219.1 | WGR domain-containing protein | - |
| EY713_RS22085 () | 107169..107795 | + | 627 | WP_131120221.1 | 4-coumaroyl-homoserine lactone synthase | VF |
| EY713_RS22090 () | 107822..108067 | + | 246 | WP_131120222.1 | hypothetical protein | - |
| EY713_RS22095 () | 108409..109029 | - | 621 | Protein_101 | hypothetical protein | - |
| EY713_RS22100 () | 109137..109700 | - | 564 | WP_131120224.1 | hypothetical protein | - |
| EY713_RS22105 () | 109746..110234 | - | 489 | WP_131120226.1 | hypothetical protein | - |
| EY713_RS22110 () | 110428..110973 | - | 546 | WP_131120228.1 | hypothetical protein | - |
| EY713_RS22115 () | 110970..111542 | - | 573 | WP_131120323.1 | thermonuclease family protein | - |
| EY713_RS22120 () | 111559..111897 | - | 339 | WP_131120230.1 | single-stranded DNA-binding protein | - |
| EY713_RS22125 () | 111927..112496 | - | 570 | WP_131120325.1 | thermonuclease family protein | - |
| EY713_RS22130 () | 112698..113432 | + | 735 | WP_131120232.1 | lytic transglycosylase domain-containing protein | - |
| EY713_RS22135 () | 113446..113748 | + | 303 | WP_131120234.1 | TrbC/VirB2 family protein | - |
| EY713_RS22140 () | 113745..114041 | + | 297 | WP_131120236.1 | hypothetical protein | VF |
| EY713_RS22145 () | 114051..116462 | + | 2412 | WP_131120239.1 | Type IV secretion system protein virB4 | VF |
| EY713_RS22150 () | 116459..117283 | + | 825 | WP_131120241.1 | hypothetical protein | - |
| EY713_RS22155 () | 117293..118012 | + | 720 | WP_131120242.1 | conjugal transfer protein | - |
| EY713_RS22160 () | 118021..118209 | + | 189 | WP_131120244.1 | hypothetical protein | - |
| EY713_RS22165 () | 118206..118394 | + | 189 | WP_131120246.1 | hypothetical protein | - |
| EY713_RS22170 () | 118401..119513 | + | 1113 | WP_131120248.1 | type IV secretion system protein | - |
| EY713_RS22175 () | 119549..120229 | + | 681 | WP_170314129.1 | Type IV secretion system protein virB8 | VF |
| EY713_RS22180 () | 120229..121067 | + | 839 | Protein_118 | Type IV secretion system protein virB9 | VF |
| EY713_RS22185 () | 121074..122432 | + | 1359 | WP_131120253.1 | Type IV secretion system protein virB10 | VF |
| EY713_RS22190 () | 122392..123501 | + | 1110 | WP_131120255.1 | Type IV secretion system protein VirB11 | VF |
| EY713_RS22195 () | 123479..125620 | + | 2142 | WP_131120257.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EY713_RS22200 () | 125703..126128 | - | 426 | Protein_122 | RES family NAD+ phosphorylase | - |
| EY713_RS22205 () | 126128..126556 | - | 429 | WP_131120328.1 | DUF2384 domain-containing protein | - |
| EY713_RS22210 () | 126860..127629 | - | 770 | Protein_124 | IS5 family transposase ISPme2 | Transposase |
| EY713_RS22220 () | 128435..129280 | + | 846 | WP_131120259.1 | hypothetical protein | - |
| EY713_RS22225 () | 129502..130637 | + | 1136 | WP_131120261.1 | IS3 family transposase ISKpn11 | Transposase |
| EY713_RS22230 () | 130839..131318 | + | 480 | Protein_127 | DUF1993 domain-containing protein | - |
| EY713_RS22235 () | 131568..132056 | - | 489 | WP_131120263.1 | peroxiredoxin family protein | - |
| EY713_RS22240 () | 132108..132383 | - | 276 | WP_165491252.1 | DMT family transporter | - |
| EY713_RS22245 () | 132670..133125 | - | 456 | WP_131120265.1 | carboxymuconolactone decarboxylase family protein | - |
| EY713_RS22250 () | 133268..134023 | - | 756 | Protein_131 | hypothetical protein | - |
| EY713_RS22925 () | 134282..134368 | + | 87 | Protein_132 | Tn3 family transposase | - |
| EY713_RS22930 () | 135045..135209 | + | 165 | WP_165491253.1 | hypothetical protein | - |
| EY713_RS22260 () | 135337..136141 | + | 805 | Protein_134 | IS5 family transposase ISPko5 | Transposase |
| EY713_RS22265 () | 136241..136646 | + | 406 | Protein_135 | transposase | - |
| EY713_RS22270 () | 136643..136885 | + | 243 | WP_131120269.1 | IS66 family transposase ISAli10 | Transposase |
| EY713_RS22275 () | 137079..138524 | - | 1446 | WP_131120271.1 | IS1182 family transposase ISPa7 | Transposase |
| EY713_RS22280 () | 138570..139016 | - | 447 | WP_131120273.1 | GNAT family N-acetyltransferase | - |
| EY713_RS22285 () | 139149..139685 | - | 537 | WP_165491254.1 | LysR family transcriptional regulator substrate-binding protein | - |
| EY713_RS22290 () | 140370..140804 | - | 435 | WP_131120277.1 | PIN domain-containing protein | Toxin Detail |
| EY713_RS22295 () | 140801..141028 | - | 228 | WP_131120279.1 | CopG family transcriptional regulator | Antitoxin Detail |
| EY713_RS22300 () | 141058..142047 | - | 990 | Protein_142 | DUF2493 domain-containing protein | - |
| EY713_RS22305 () | 142382..142978 | - | 597 | WP_131120281.1 | toprim domain-containing protein | - |
| EY713_RS22310 () | 143217..143468 | + | 252 | WP_131120283.1 | hypothetical protein | - |
| EY713_RS22320 () | 143755..144710 | - | 956 | Protein_145 | DUF1738 domain-containing protein | - |
| EY713_RS22325 () | 145207..145785 | + | 579 | WP_131120332.1 | DUF2384 domain-containing protein | - |
| EY713_RS22330 () | 145789..146367 | + | 579 | WP_131120287.1 | RES family NAD+ phosphorylase | - |
| EY713_RS22335 () | 146564..147232 | - | 669 | WP_131120289.1 | hypothetical protein | - |
| EY713_RS22945 () | 148610..148798 | - | 189 | WP_170314126.1 | hypothetical protein | - |
| EY713_RS22350 () | 148921..149178 | + | 258 | WP_170314127.1 | hypothetical protein | - |
| EY713_RS22355 () | 149175..149585 | + | 411 | WP_131120291.1 | Rieske (2Fe-2S) protein | - |
| EY713_RS22360 () | 149862..150491 | + | 630 | Protein_153 | glutathione S-transferase family protein | - |
| EY713_RS22365 () | 150731..151796 | + | 1066 | Protein_154 | BMP family ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|