NZ_CP0363011..154724

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 154724 bp
Accession: NZ_CP036301        Location: 1..154724         Organism: Klebsiella pneumoniae subsp. pneumoniae strain WCHKP015093       Replicon: plasmid pKPC2_015093


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLQ99_RS31540 () 1..858 + 858 WP_032495102.1 incFII family plasmid replication initiator RepA -
CLQ99_RS27520 () 1797..2450 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
CLQ99_RS27525 () 2543..2800 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
CLQ99_RS27530 () 2733..3134 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
CLQ99_RS27535 () 3383..3798 + 416 Protein_5 IS1 family transposase -
CLQ99_RS27540 () 3834..4253 - 420 Protein_6 Tn3 family transposase TnpA_Tn3 Transposase
CLQ99_RS27545 () 4317..5021 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS27550 () 5087..5221 + 135 Protein_8 Tn3 family transposase -
CLQ99_RS27555 () 5273..5977 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS27560 () 6115..6996 + 882 Protein_10 IS1182 family transposase ISKpn6 Transposase
CLQ99_RS27565 () 7246..8127 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
CLQ99_RS27570 () 8403..9383 - 981 WP_013213985.1 IS481 family transposase ISKpn27 Transposase
CLQ99_RS27575 () 9506..9967 - 462 Protein_13 Tn3 family transposase TnpR_Tn3 Transposase
CLQ99_RS27585 () 10019..10723 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS27590 () 10793..10984 + 192 Protein_15 transposase -
CLQ99_RS27595 () 11234..12109 + 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
CLQ99_RS27600 () 12144..13112 + 969 WP_013362812.1 IS5 family transposase IS903B Transposase
CLQ99_RS27605 () 13169..14266 + 1098 Protein_18 TonB-dependent receptor -
CLQ99_RS27610 () 14334..14783 - 450 Protein_19 PAS domain-containing protein -
CLQ99_RS27615 () 14863..15567 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS27620 () 15632..16222 + 591 Protein_21 IS91 family transposase ISSbo1 Transposase
CLQ99_RS27630 () 16678..17382 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS27635 () 17433..18050 - 618 Protein_23 IS91 family transposase ISSbo1 Transposase
CLQ99_RS27640 () 18060..18248 - 189 WP_000957857.1 hypothetical protein -
CLQ99_RS27645 () 18340..18876 + 537 WP_064441864.1 Tn3 family transposase TnpR_Tn3 Transposase
CLQ99_RS27650 () 19059..19919 + 861 WP_000027057.1 Beta-lactamase TEM ARG
CLQ99_RS27655 () 20089..20844 + 756 WP_012372818.1 16S rRNA (guanine(1405)-N(7))-methyltransferase ARG
CLQ99_RS27660 () 20925..21206 - 282 WP_015059004.1 sodium/hydrogen exchanger -
CLQ99_RS27665 () 21294..21998 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
CLQ99_RS27670 () 21989..22129 + 141 WP_071557810.1 hypothetical protein -
CLQ99_RS27685 () 23578..23812 + 235 Protein_31 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ99_RS27690 () 23940..24221 + 282 WP_001333089.1 hypothetical protein -
CLQ99_RS27695 () 24344..24694 - 351 WP_000361389.1 plasmid partitioning/stability family protein -
CLQ99_RS27700 () 24697..25659 - 963 WP_000959884.1 plasmid segregation protein ParM -
CLQ99_RS27705 () 25806..26099 + 294 WP_032146011.1 hypothetical protein -
CLQ99_RS27715 () 26176..26859 + 684 WP_000085883.1 DNA methylase -
CLQ99_RS27720 () 26860..27081 + 222 WP_001104881.1 hypothetical protein -
CLQ99_RS27725 () 27095..27529 + 435 WP_000274503.1 DUF1380 family protein -
CLQ99_RS31545 () 27580..28356 + 777 WP_001383963.1 hypothetical protein -
CLQ99_RS27740 () 28774..29199 + 426 WP_001198928.1 antirestriction protein -
CLQ99_RS27745 () 29246..29668 + 423 WP_000271762.1 DUF1380 family protein -
CLQ99_RS27750 () 29665..29856 + 192 WP_001027493.1 hypothetical protein -
CLQ99_RS27755 () 30170..31837 - 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
CLQ99_RS27765 () 33237..33467 + 231 WP_000218642.1 hypothetical protein -
CLQ99_RS27770 () 33519..34880 + 1362 WP_000170695.1 DUF3560 domain-containing protein -
CLQ99_RS27775 () 34927..35490 + 564 WP_015059007.1 class I SAM-dependent methyltransferase -
CLQ99_RS27795 () 36339..36866 + 528 WP_000290834.1 single-stranded DNA-binding protein -
CLQ99_RS27800 () 36924..37157 + 234 WP_000006003.1 DUF905 family protein -
CLQ99_RS27805 () 37218..39241 + 2024 Protein_49 ParB/RepB/Spo0J family partition protein -
CLQ99_RS27810 () 39310..39744 + 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
CLQ99_RS27815 () 39741..40460 + 720 WP_001276217.1 plasmid SOS inhibition protein A -
- () 40472..40696 + 225 NuclAT_0 - -
- () 40472..40696 + 225 NuclAT_0 - -
- () 40472..40696 + 225 NuclAT_0 - -
- () 40472..40696 + 225 NuclAT_0 - -
CLQ99_RS31200 () 40740..40898 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CLQ99_RS31550 () 41136..41513 - 378 Protein_53 hypothetical protein -
CLQ99_RS27840 () 41813..42109 + 297 WP_001272251.1 hypothetical protein -
CLQ99_RS27845 () 42220..43041 + 822 WP_001234445.1 DUF945 domain-containing protein -
CLQ99_RS27850 () 43338..43985 - 648 WP_015059008.1 hypothetical protein VF
CLQ99_RS27855 () 44262..44645 + 384 WP_000124981.1 relaxosome protein TraM -
CLQ99_RS27860 () 44836..45522 + 687 WP_015059009.1 PAS domain-containing protein -
CLQ99_RS27865 () 45616..45843 + 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
CLQ99_RS27870 () 45877..46242 + 366 WP_021519752.1 type IV conjugative transfer system pilin TraA -
CLQ99_RS27875 () 46257..46568 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
CLQ99_RS27880 () 46590..47156 + 567 WP_000399794.1 type IV conjugative transfer system protein TraE -
CLQ99_RS27885 () 47167..47871 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
CLQ99_RS27890 () 47871..49298 + 1428 WP_032297072.1 conjugal transfer protein TraB -
CLQ99_RS27895 () 49288..49878 + 591 WP_000002778.1 conjugal transfer protein TraP -
CLQ99_RS27900 () 49832..50062 + 231 WP_001352845.1 conjugal transfer protein TrbD -
CLQ99_RS27905 () 50074..50325 + 252 WP_001038341.1 conjugal transfer protein TrbG -
CLQ99_RS27910 () 50322..50837 + 516 WP_062955122.1 type IV conjugative transfer system lipoprotein TraV -
CLQ99_RS27915 () 50972..51193 + 222 WP_001278692.1 conjugal transfer protein TraR -
CLQ99_RS27920 () 51353..53980 + 2628 WP_015059012.1 type IV secretion system protein TraC -
CLQ99_RS27925 () 53977..54363 + 387 WP_015059013.1 type-F conjugative transfer system protein TrbI -
CLQ99_RS27930 () 54360..54992 + 633 WP_001203735.1 type-F conjugative transfer system protein TraW -
CLQ99_RS27935 () 54989..55981 + 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
CLQ99_RS27940 () 56008..56316 + 309 WP_000412447.1 hypothetical protein -
CLQ99_RS27945 () 56379..56900 + 522 WP_015059014.1 hypothetical protein -
CLQ99_RS27950 () 56927..57565 + 639 WP_000087532.1 type-F conjugative transfer system pilin assembly protein TrbC -
CLQ99_RS27955 () 57562..57933 + 372 WP_000056336.1 hypothetical protein -
CLQ99_RS27960 () 57959..58381 + 423 WP_001229309.1 HNH endonuclease -
CLQ99_RS27965 () 58378..60228 + 1851 WP_015059015.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CLQ99_RS27970 () 60255..60512 + 258 WP_053913405.1 conjugal transfer protein TrbE -
CLQ99_RS27975 () 60499..61248 + 750 WP_072354014.1 type-F conjugative transfer system pilin assembly protein TraF -
CLQ99_RS27980 () 61364..61645 + 282 WP_000549793.1 type-F conjugative transfer system pilin chaperone TraQ -
CLQ99_RS27985 () 61632..62177 + 546 WP_000059817.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CLQ99_RS27990 () 62107..62481 + 375 WP_071776752.1 P-type conjugative transfer protein TrbJ -
CLQ99_RS27995 () 62435..62827 + 393 WP_000126338.1 F-type conjugal transfer protein TrbF -
CLQ99_RS28000 () 62814..64187 + 1374 WP_000944325.1 conjugal transfer protein TraH -
CLQ99_RS28005 () 64184..67000 + 2817 WP_015059018.1 conjugal transfer mating pair stabilization protein TraG -
CLQ99_RS28010 () 67033..67554 + 522 WP_000632668.1 conjugal transfer entry exclusion protein TraS -
CLQ99_RS28015 () 67579..68310 + 732 WP_021559024.1 complement resistance protein TraT -
CLQ99_RS28020 () 68513..69250 + 738 WP_015059020.1 hypothetical protein -
CLQ99_RS28025 () 69301..71526 + 2226 WP_000009363.1 type IV conjugative transfer system coupling protein TraD -
CLQ99_RS28030 () 71526..76661 + 5136 WP_071177725.1 Multifunctional conjugation protein TraI Relaxase
CLQ99_RS28035 () 76695..77399 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS28040 () 77868..78425 - 558 WP_042934582.1 hypothetical protein -
CLQ99_RS28045 () 78553..78930 - 378 Protein_95 restriction endonuclease -
CLQ99_RS28050 () 79077..80057 - 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
CLQ99_RS28055 () 80126..80518 + 393 Protein_97 3'-5' exonuclease -
CLQ99_RS28060 () 80571..80966 + 396 WP_015493087.1 hypothetical protein -
CLQ99_RS28065 () 80963..81574 + 612 WP_015493086.1 DUF2913 family protein -
CLQ99_RS28070 () 81571..82521 - 951 WP_015493085.1 Recombination-promoting nuclease RpnA VF
CLQ99_RS28075 () 82668..82868 - 201 WP_040219232.1 hypothetical protein -
CLQ99_RS28080 () 82922..83554 - 633 WP_022652286.1 Tn3 family transposase TnpR_TnEc1 Transposase
CLQ99_RS28085 () 83917..85122 + 1206 WP_015493083.1 Plasmid partition protein A VF
CLQ99_RS28090 () 85119..86090 + 972 WP_016479949.1 ParB/RepB/Spo0J family partition protein -
CLQ99_RS28100 () 86226..87497 - 1272 WP_015493081.1 Y-family DNA polymerase -
CLQ99_RS28105 () 87497..87919 - 423 WP_015493080.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CLQ99_RS28110 () 88099..88770 - 672 WP_015493079.1 SOS response-associated peptidase family protein -
CLQ99_RS28115 () 89129..89806 + 678 WP_002211749.1 DNA methylase -
CLQ99_RS28120 () 89806..90027 + 222 WP_015493077.1 hypothetical protein -
CLQ99_RS28125 () 90038..90457 + 420 WP_015493076.1 DUF1380 domain-containing protein -
CLQ99_RS28130 () 90511..91290 + 780 WP_015493075.1 hypothetical protein -
CLQ99_RS28135 () 91695..92201 + 507 WP_015493074.1 antirestriction protein ArdA -
CLQ99_RS28140 () 92244..92435 + 192 WP_015493073.1 hypothetical protein -
CLQ99_RS28145 () 92628..92882 + 255 WP_015493072.1 DNA polymerase III subunit theta -
CLQ99_RS28150 () 92917..93234 + 318 Protein_115 hypothetical protein -
CLQ99_RS28155 () 93860..94090 + 231 WP_015493071.1 DUF905 domain-containing protein -
CLQ99_RS28160 () 94161..96170 + 2010 Protein_117 ParB/RepB/Spo0J family partition protein -
CLQ99_RS28165 () 96213..96644 + 432 WP_008324186.1 conjugation system SOS inhibitor PsiB -
CLQ99_RS28170 () 96641..97369 + 729 WP_008324185.1 plasmid SOS inhibition protein A -
CLQ99_RS28175 () 97366..97689 + 324 WP_008324183.1 hypothetical protein -
CLQ99_RS28180 () 97751..98110 + 360 WP_015493069.1 hypothetical protein -
CLQ99_RS28185 () 98736..99110 + 375 WP_008324180.1 hypothetical protein -
CLQ99_RS28190 () 99236..99940 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS28200 () 99995..100360 - 366 Protein_124 type IV conjugative transfer system protein TraE -
CLQ99_RS28205 () 100380..100685 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
CLQ99_RS28210 () 100699..101067 - 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
CLQ99_RS28215 () 101129..101335 - 207 WP_171773970.1 TraY domain-containing protein -
CLQ99_RS28220 () 101450..102187 - 738 WP_013214018.1 conjugal transfer protein TrbJ -
CLQ99_RS28225 () 102387..102803 - 417 WP_014343494.1 relaxosome protein TraM -
CLQ99_RS28230 () 103194..103679 + 486 WP_014343495.1 hypothetical protein VF
CLQ99_RS28235 () 103712..104041 - 330 WP_013214015.1 hypothetical protein -
CLQ99_RS28240 () 104074..104895 - 822 WP_004152492.1 DUF945 domain-containing protein -
CLQ99_RS28265 () 105832..106110 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CLQ99_RS28270 () 106100..106420 - 321 WP_014343498.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ99_RS28275 () 106501..106725 - 225 WP_014343499.1 hypothetical protein -
CLQ99_RS28280 () 106736..106948 - 213 WP_014343500.1 hypothetical protein -
CLQ99_RS28285 () 107009..107365 - 357 WP_014343501.1 hypothetical protein -
CLQ99_RS28295 () 108206..108523 - 318 WP_014343505.1 hypothetical protein -
CLQ99_RS28300 () 108538..108888 - 351 WP_040245917.1 hypothetical protein -
CLQ99_RS28305 () 108885..109157 - 273 WP_040245921.1 hypothetical protein -
CLQ99_RS28315 () 109850..110008 - 159 WP_014343509.1 type I toxin-antitoxin system Hok family toxin -
CLQ99_RS28325 () 110236..110610 - 375 WP_014343510.1 hypothetical protein -
CLQ99_RS28330 () 110666..110992 - 327 WP_013023807.1 hypothetical protein -
CLQ99_RS28335 () 110989..111717 - 729 WP_001568058.1 plasmid SOS inhibition protein A -
CLQ99_RS28340 () 111714..112145 - 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
CLQ99_RS28345 () 112190..114247 - 2058 WP_015493064.1 ParB/RepB/Spo0J family partition protein -
CLQ99_RS28350 () 114317..114565 - 249 WP_001568055.1 DUF905 domain-containing protein -
CLQ99_RS28355 () 114614..115156 - 543 WP_072354024.1 single-stranded DNA-binding protein -
CLQ99_RS28370 () 115988..116551 - 564 WP_014343514.1 methyltransferase -
CLQ99_RS28375 () 116599..117954 - 1356 WP_014343515.1 DUF3560 domain-containing protein -
CLQ99_RS28380 () 118006..118236 - 231 WP_001568051.1 hypothetical protein -
CLQ99_RS28385 () 118328..118555 - 228 WP_001568050.1 hypothetical protein -
CLQ99_RS28405 () 119235..119555 - 321 WP_001568049.1 hypothetical protein -
CLQ99_RS28410 () 119590..119844 - 255 WP_011977779.1 DNA polymerase III subunit theta -
CLQ99_RS28415 () 120037..120228 - 192 WP_023340977.1 hypothetical protein -
CLQ99_RS28420 () 120271..120777 - 507 WP_013214014.1 antirestriction protein ArdA -
CLQ99_RS31555 () 120820..121248 - 429 WP_001568045.1 antirestriction protein -
CLQ99_RS28430 () 121929..122696 - 768 WP_013214013.1 hypothetical protein -
CLQ99_RS28435 () 122750..123169 - 420 WP_001568043.1 DUF1380 domain-containing protein -
CLQ99_RS28440 () 123179..123400 - 222 WP_001568042.1 hypothetical protein -
CLQ99_RS28445 () 123400..124101 - 702 WP_001568041.1 DNA methylase -
CLQ99_RS28450 () 124538..124768 - 231 WP_001568040.1 hypothetical protein -
CLQ99_RS28455 () 124831..125502 - 672 WP_013214012.1 plasmid partitioning/stability family protein -
CLQ99_RS28460 () 125505..126476 - 972 WP_004152353.1 mediator of plasmid stability -
CLQ99_RS28465 () 126725..128212 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
CLQ99_RS28475 () 128619..129050 + 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CLQ99_RS28480 () 129050..130321 + 1272 WP_013214011.1 Y-family DNA polymerase -
CLQ99_RS28485 () 130403..131377 - 975 WP_011977819.1 ParB/RepB/Spo0J family partition protein -
CLQ99_RS28490 () 131377..132582 - 1206 WP_011977818.1 AAA family ATPase -
CLQ99_RS28505 () 133692..134558 - 867 WP_004118283.1 replication initiation protein -
CLQ99_RS31280 () 135094..135207 + 114 WP_014343462.1 hypothetical protein -
CLQ99_RS28510 () 135336..135593 + 258 WP_013214010.1 hypothetical protein -
CLQ99_RS28515 () 135639..136418 - 780 WP_013214009.1 site-specific integrase -
CLQ99_RS28520 () 136602..137606 - 1005 WP_011977814.1 hypothetical protein -
CLQ99_RS28525 () 137636..137839 - 204 WP_011977813.1 hypothetical protein -
CLQ99_RS28530 () 137885..138406 - 522 WP_013214008.1 hypothetical protein -
CLQ99_RS28535 () 138464..138856 - 393 WP_011977811.1 hypothetical protein -
CLQ99_RS28540 () 138893..139837 - 945 WP_011977810.1 hypothetical protein -
CLQ99_RS28545 () 139998..140459 - 462 WP_014343465.1 hypothetical protein -
CLQ99_RS28550 () 140416..140646 + 231 WP_001261282.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
CLQ99_RS28555 () 140643..141059 + 417 WP_001044770.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CLQ99_RS28560 () 141133..142695 + 1563 WP_004206609.1 AAA family ATPase -
CLQ99_RS28565 () 142680..143702 + 1023 WP_000361404.1 helicase UvrD -
CLQ99_RS28570 () 143958..144655 + 698 Protein_184 IS1 family transposase ISKpn14 Transposase
CLQ99_RS28575 () 144684..144956 + 273 Protein_185 IS5 family transposase ISPan1 Transposase
CLQ99_RS28580 () 145236..146240 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
CLQ99_RS28585 () 146319..149285 - 2967 WP_042863651.1 Tn3 family transposase TnpA_ISPa38 Transposase
CLQ99_RS28590 () 149288..149353 - 66 Protein_188 helix-turn-helix domain-containing protein -
CLQ99_RS28595 () 149406..150110 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ99_RS28600 () 150174..150335 + 162 Protein_190 DNA helicase -
CLQ99_RS28605 () 150355..151101 + 747 WP_000205770.1 conjugal transfer pilus acetylase TraX -
CLQ99_RS28610 () 151156..151716 + 561 WP_000139328.1 fertility inhibition protein FinO -
CLQ99_RS28615 () 151848..152048 + 201 WP_015059022.1 hypothetical protein -
CLQ99_RS28620 () 152434..153033 + 600 WP_032083981.1 hypothetical protein -
CLQ99_RS28625 () 153197..153427 + 231 WP_001736714.1 hypothetical protein -
- () 153628..153687 - 60 NuclAT_1 - Antitoxin Detail
- () 153628..153687 - 60 NuclAT_1 - Antitoxin Detail
- () 153628..153687 - 60 NuclAT_1 - Antitoxin Detail
- () 153628..153687 - 60 NuclAT_1 - Antitoxin Detail
CLQ99_RS28635 () 153732..153881 + 150 WP_001312851.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CLQ99_RS28640 () 154165..154413 + 249 WP_000083837.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance