NZ_CP0358851..163137

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 163137 bp
Accession: NZ_CP035885        Location: 1..163137         Organism: Escherichia coli strain LSN03-016011/A       Replicon: plasmid pLSN03016011A_163


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EW995_RS24190 (533) 533..802 - 270 Protein_1 IS21 family transposase ISEc12 Transposase
EW995_RS24195 (1386) 1386..2255 - 870 WP_001577353.1 hypothetical protein -
EW995_RS24200 (2257) 2257..3594 - 1338 WP_001577352.1 AAA family ATPase -
EW995_RS24205 (4175) 4175..4915 + 741 WP_001066941.1 tyrosine-type recombinase/integrase -
EW995_RS24210 (5158) 5158..6135 - 978 WP_000361613.1 RepB family plasmid replication initiator protein -
EW995_RS24215 (7003) 7003..7336 - 334 Protein_6 ISL3 family transposase -
EW995_RS24220 (7407) 7407..7664 + 258 Protein_7 IS3 family transposase IS911 Transposase
EW995_RS24225 (7732) 7732..8883 + 1152 WP_001254876.1 IS30 family transposase IS30D Transposase
EW995_RS24230 (8893) 8893..9799 + 907 Protein_9 IS3 family transposase ISEc52 Transposase
EW995_RS24235 (9805) 9805..10588 - 784 Protein_10 IS21 family transposase IS21 Transposase
EW995_RS24240 (10652) 10652..10980 - 329 Protein_11 IS3 family transposase -
EW995_RS24250 (12373) 12373..12629 + 257 Protein_13 transposase -
EW995_RS24255 (12715) 12715..13929 - 1215 WP_134741918.1 acyltransferase -
EW995_RS24260 (14985) 14985..15959 - 975 WP_250192320.1 IS3 family transposase ISAs9 Transposase
EW995_RS24265 (16010) 16010..16237 - 228 WP_097316322.1 transposase -
EW995_RS24270 (16269) 16269..17175 - 907 Protein_17 IS3 family transposase ISEc52 Transposase
EW995_RS24275 (17185) 17185..18336 - 1152 WP_001254876.1 IS30 family transposase IS30D Transposase
EW995_RS24280 (18404) 18404..18661 - 258 Protein_19 IS3 family transposase ISEc52 Transposase
EW995_RS24285 (18734) 18734..19087 + 354 Protein_20 IS3 family transposase ISKpn38 Transposase
EW995_RS24290 (19190) 19190..20277 + 1088 Protein_21 IS91 family transposase ISEc37 Transposase
EW995_RS24295 (20641) 20641..21267 - 627 WP_024168245.1 ATP-binding cassette domain-containing protein -
EW995_RS24300 (21248) 21248..22027 - 780 WP_001578341.1 hypothetical protein -
EW995_RS24305 (21990) 21990..23195 - 1206 WP_167553973.1 TolC family protein -
EW995_RS24310 (23192) 23192..24328 - 1137 WP_001579839.1 hypothetical protein -
EW995_RS25280 (24967) 24967..25362 + 396 WP_250192313.1 plasmid pRiA4b ORF-3 family protein -
EW995_RS25285 (25337) 25337..25561 + 225 WP_250192312.1 hypothetical protein -
EW995_RS24320 (25697) 25697..26269 + 573 WP_001740031.1 Tn3 family transposase TnpR_ISPa40 Transposase
EW995_RS24325 (26305) 26305..27696 + 1392 WP_032173292.1 ISKra4 family transposase ISKpn19 Transposase
EW995_RS25290 (27718) 27718..27852 - 135 Protein_30 hypothetical protein -
EW995_RS24330 (28028) 28028..28477 - 450 WP_134737215.1 hypothetical protein -
EW995_RS24335 (29004) 29004..29445 + 442 Protein_32 IS1 family transposase -
EW995_RS24345 (29523) 29523..29795 + 273 WP_134742656.1 hypothetical protein -
EW995_RS24350 (29776) 29776..30983 + 1208 WP_216349510.1 IS91 family transposase ISSbo1 Transposase
EW995_RS24355 (31163) 31163..31240 + 78 Protein_35 IS1 family transposase -
EW995_RS24360 (31332) 31332..31610 - 279 Protein_36 type II toxin-antitoxin system toxin YacB -
EW995_RS24365 (31610) 31610..31879 - 270 WP_134737203.1 type II toxin-antitoxin system antitoxin YacA -
EW995_RS24370 (32799) 32799..33821 - 1023 WP_000234918.1 plasmid replication initiator RepA -
EW995_RS24375 (33811) 33811..34344 - 534 WP_001505108.1 plasmid replication initiator RepA -
EW995_RS25295 (34337) 34337..34384 - 48 WP_235246954.1 hypothetical protein -
EW995_RS25300 (34375) 34375..34608 + 234 WP_226058127.1 replication protein RepA -
EW995_RS24385 (34644) 34644..34901 - 258 WP_001505109.1 replication regulatory protein RepA -
EW995_RS24390 (35141) 35141..35731 - 591 WP_001505110.1 DUF2726 domain-containing protein -
EW995_RS24395 (35770) 35770..35979 - 210 WP_001299729.1 hemolysin expression modulator Hha -
EW995_RS24400 (36025) 36025..36486 - 462 WP_001505111.1 thermonuclease family protein -
EW995_RS24405 (36731) 36731..36943 - 213 WP_032305142.1 ANR family transcriptional regulator -
EW995_RS24410 (37076) 37076..37636 - 561 WP_000139341.1 fertility inhibition protein FinO -
EW995_RS24415 (37691) 37691..38392 - 702 WP_235246949.1 conjugal transfer pilus acetylase TraX -
EW995_RS24420 (38447) 38447..38866 - 420 WP_000451342.1 hypothetical protein -
EW995_RS24425 (38915) 38915..44184 - 5270 Protein_50 Multifunctional conjugation protein TraI Relaxase
EW995_RS24430 (44184) 44184..46355 - 2172 WP_216349511.1 type IV conjugative transfer system coupling protein TraD -
EW995_RS24435 (46637) 46637..47116 - 480 WP_001473214.1 hypothetical protein -
EW995_RS24440 (47320) 47320..48030 - 711 WP_225089020.1 conjugal transfer complement resistance protein TraT -
EW995_RS24445 (48100) 48100..48585 - 486 WP_077513832.1 surface exclusion protein -
EW995_RS24450 (48601) 48601..51423 - 2823 WP_074534181.1 conjugal transfer mating-pair stabilization protein TraG -
EW995_RS24455 (51420) 51420..52793 - 1374 WP_001403427.1 conjugal transfer pilus assembly protein TraH -
EW995_RS24460 (52780) 52780..53172 - 393 WP_001505123.1 F-type conjugal transfer protein TrbF -
EW995_RS24465 (53153) 53153..53500 - 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
EW995_RS24470 (53430) 53430..53975 - 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
EW995_RS24475 (53962) 53962..54246 - 285 WP_000623730.1 type-F conjugative transfer system pilin chaperone TraQ -
EW995_RS24480 (54373) 54373..54712 - 340 Protein_61 conjugal transfer protein TrbA -
EW995_RS24485 (54728) 54728..55471 - 744 WP_001403429.1 type-F conjugative transfer system pilin assembly protein TraF -
EW995_RS24490 (55464) 55464..55721 - 258 WP_000864347.1 conjugal transfer protein TrbE -
EW995_RS24495 (55748) 55748..56188 - 441 Protein_64 conjugal transfer protein TraN -
EW995_RS24500 (56196) 56196..57347 - 1152 WP_001254876.1 IS30 family transposase IS30D Transposase
EW995_RS24505 (57412) 57412..58821 - 1410 Protein_66 conjugal transfer protein TraN -
EW995_RS24510 (58818) 58818..59456 - 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
EW995_RS24515 (59465) 59465..59770 - 306 WP_001505125.1 hypothetical protein -
EW995_RS24520 (59800) 59800..60792 - 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
EW995_RS24525 (60789) 60789..61421 - 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
EW995_RS24530 (61418) 61418..61804 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
EW995_RS24535 (61801) 61801..64428 - 2628 WP_134741886.1 type IV secretion system protein TraC -
EW995_RS24540 (64588) 64588..64809 - 222 WP_001278694.1 conjugal transfer protein TraR -
EW995_RS24545 (64944) 64944..65459 - 516 WP_001403433.1 type IV conjugative transfer system lipoprotein TraV -
EW995_RS24550 (65459) 65459..65770 - 312 WP_001057272.1 conjugal transfer protein TrbD -
EW995_RS24555 (65757) 65757..66323 - 567 WP_000896601.1 conjugal transfer pilus-stabilizing protein TraP -
EW995_RS24560 (66313) 66313..67764 - 1452 WP_000146647.1 F-type conjugal transfer pilus assembly protein TraB -
EW995_RS24565 (67764) 67764..68492 - 729 WP_001230809.1 type-F conjugative transfer system secretin TraK -
EW995_RS24570 (68479) 68479..69045 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
EW995_RS24575 (69067) 69067..69378 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
EW995_RS24580 (69383) 69383..69745 - 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
EW995_RS24585 (69779) 69779..70006 - 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
EW995_RS24590 (70094) 70094..70786 - 693 WP_001403354.1 PAS domain-containing protein -
EW995_RS24595 (70980) 70980..71363 - 384 WP_134737200.1 conjugal transfer relaxosome DNA-binding protein TraM -
EW995_RS24600 (71694) 71694..72296 + 603 WP_077819394.1 hypothetical protein VF
EW995_RS24605 (72593) 72593..73378 - 786 WP_063101505.1 DUF932 domain-containing protein -
EW995_RS24610 (73533) 73533..73820 - 288 WP_134737199.1 hypothetical protein -
EW995_RS25305 (73845) 73845..74051 - 207 WP_000547968.1 hypothetical protein -
EW995_RS25310 (74121) 74121..74294 + 174 Protein_89 hypothetical protein -
EW995_RS25315 (74292) 74292..74522 - 231 WP_253207931.1 hypothetical protein -
EW995_RS24615 (74743) 74743..74868 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
EW995_RS25320 (74810) 74810..74959 - 150 Protein_92 plasmid maintenance protein Mok -
- (74945) 74945..75169 - 225 NuclAT_0 - Antitoxin Detail
- (74945) 74945..75169 - 225 NuclAT_0 - Antitoxin Detail
- (74945) 74945..75169 - 225 NuclAT_0 - Antitoxin Detail
- (74945) 74945..75169 - 225 NuclAT_0 - Antitoxin Detail
EW995_RS24620 (74981) 74981..75169 + 189 WP_001299721.1 hypothetical protein -
EW995_RS24625 (75138) 75138..75900 - 763 Protein_94 plasmid SOS inhibition protein A -
EW995_RS24630 (75897) 75897..76331 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
EW995_RS24635 (76386) 76386..78344 - 1959 WP_134737225.1 ParB/RepB/Spo0J family partition protein -
EW995_RS24640 (78410) 78410..78643 - 234 WP_000005990.1 DUF905 family protein -
EW995_RS24645 (78706) 78706..79245 - 540 WP_001505134.1 single-stranded DNA-binding protein -
EW995_RS24650 (79271) 79271..79477 - 207 WP_000275853.1 hypothetical protein -
EW995_RS24655 (80087) 80087..80278 - 192 WP_134737227.1 hypothetical protein -
EW995_RS24660 (80275) 80275..80697 - 423 WP_000271681.1 DUF1380 family protein -
EW995_RS24665 (80744) 80744..81169 - 426 WP_001198928.1 antirestriction protein -
EW995_RS24670 (81587) 81587..82357 - 771 Protein_103 hypothetical protein -
EW995_RS24675 (82402) 82402..82869 - 468 WP_250192310.1 DUF1380 family protein -
EW995_RS24680 (82850) 82850..83071 - 222 WP_001505077.1 hypothetical protein -
EW995_RS24685 (83072) 83072..83755 - 684 WP_001474699.1 DNA methylase -
EW995_RS24690 (83831) 83831..84142 - 312 WP_014640311.1 hypothetical protein -
EW995_RS24695 (84139) 84139..85039 - 901 Protein_108 DUF1281 domain-containing protein -
EW995_RS24700 (85457) 85457..85705 + 249 WP_000618110.1 DinI-like family protein -
EW995_RS24705 (85702) 85702..86139 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
EW995_RS24710 (86139) 86139..87002 + 864 Protein_111 translesion error-prone DNA polymerase V subunit UmuC -
EW995_RS24715 (87028) 87028..88599 - 1572 WP_216349491.1 IS66 family transposase ISCro1 Transposase
EW995_RS24720 (88619) 88619..88966 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EW995_RS24725 (88966) 88966..89643 - 678 WP_216349506.1 IS66 family transposase ISCro1 Transposase
EW995_RS24730 (89828) 89828..91399 - 1572 WP_216349491.1 IS66 family transposase ISCro1 Transposase
EW995_RS24735 (91419) 91419..91766 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EW995_RS24740 (91766) 91766..92443 - 678 WP_216349506.1 IS66 family transposase ISCro1 Transposase
EW995_RS24745 (92804) 92804..93394 + 591 WP_134737210.1 hypothetical protein -
EW995_RS24750 (93412) 93412..93759 - 348 WP_000142434.1 DUF6404 family protein -
EW995_RS24755 (93878) 93878..94261 + 384 WP_000762576.1 colicin E1 family microcin immunity protein -
EW995_RS24760 (94209) 94209..94427 - 219 Protein_121 helix-turn-helix domain-containing protein -
EW995_RS25325 (94455) 94455..94567 - 113 Protein_122 IS630 family transposase -
EW995_RS24765 (94703) 94703..95563 + 861 WP_134737211.1 Right origin-binding protein VF
EW995_RS24770 (95879) 95879..96992 + 1114 Protein_124 IS4 family transposase IS186A Transposase
EW995_RS24775 (97181) 97181..97549 - 369 WP_024172958.1 hypothetical protein -
EW995_RS24780 (97850) 97850..98062 - 213 Protein_126 IS1 family transposase IS1N Transposase
EW995_RS24785 (98108) 98108..101115 - 3008 Protein_127 Tn3 family transposase ISEc63 Transposase
EW995_RS24790 (101279) 101279..101836 + 558 WP_001235700.1 Tn3 family transposase ISEc63 Transposase
EW995_RS24795 (101936) 101936..102337 - 402 WP_000085189.1 hypothetical protein -
EW995_RS24800 (102543) 102543..103021 - 479 Protein_130 IS1 family transposase IS1N Transposase
EW995_RS24805 (103206) 103206..103415 - 210 Protein_131 IS5 family transposase ISPan1 Transposase
EW995_RS24810 (103597) 103597..104400 - 804 WP_001584397.1 CFA/I fimbrial subunit D VF
EW995_RS24815 (104610) 104610..104816 + 207 WP_024168349.1 ANR family transcriptional regulator -
EW995_RS25330 (105030) 105030..105116 - 87 Protein_134 hypothetical protein -
EW995_RS24820 (105142) 105142..105321 - 180 Protein_135 transposase domain-containing protein -
EW995_RS24825 (105479) 105479..106498 - 1020 WP_248783405.1 group II intron reverse transcriptase/maturase -
EW995_RS25335 (106393) 106393..106752 + 360 WP_250192311.1 hypothetical protein -
EW995_RS24830 (107111) 107111..107278 - 168 Protein_138 transposase -
EW995_RS24835 (107284) 107284..107865 + 582 Protein_139 IS256 family transposase ISSod4 Transposase
EW995_RS24840 (107900) 107900..108117 - 218 Protein_140 integrase core domain-containing protein -
EW995_RS24845 (108328) 108328..109419 - 1092 WP_134737233.1 CFA/I fimbrial subunit E VF
EW995_RS24850 (109416) 109416..112034 - 2619 WP_001579714.1 hypothetical protein VF
EW995_RS24855 (112101) 112101..112607 - 507 WP_001366218.1 CS1 fimbrial subunit A VF
EW995_RS24860 (112661) 112661..113374 - 714 WP_134737234.1 hypothetical protein VF
EW995_RS24865 (113632) 113632..113796 + 165 WP_167553972.1 IS3 family transposase IS1203 Transposase
EW995_RS24870 (113771) 113771..114109 - 339 Protein_146 IS3 family transposase ISKpn38 Transposase
EW995_RS24875 (114182) 114182..114439 + 258 Protein_147 IS3 family transposase ISEc52 Transposase
EW995_RS24880 (114507) 114507..115658 + 1152 WP_001254876.1 IS30 family transposase IS30D Transposase
EW995_RS24885 (115668) 115668..116573 + 906 Protein_149 IS3 family transposase IS911 Transposase
EW995_RS24890 (116618) 116618..116692 - 75 Protein_150 transposase -
EW995_RS24895 (116719) 116719..117741 - 1023 WP_001295213.1 IS21 family transposase IS100kyp Transposase
EW995_RS24900 (117838) 117838..119012 + 1175 Protein_152 IS3 family transposase -
EW995_RS25340 (119175) 119175..119703 - 529 Protein_153 hypothetical protein -
EW995_RS24910 (120025) 120025..120198 + 174 WP_162173578.1 hypothetical protein -
EW995_RS24915 (120240) 120240..121262 - 1023 WP_001505100.1 hypothetical protein -
EW995_RS24920 (121247) 121247..122812 - 1566 WP_001505099.1 AAA family ATPase -
EW995_RS24925 (122886) 122886..123302 - 417 WP_024167721.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EW995_RS24930 (123299) 123299..123529 - 231 WP_024167720.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
EW995_RS24935 (123858) 123858..127652 + 3795 WP_001505097.1 hypothetical protein -
EW995_RS24940 (127697) 127697..128113 - 417 WP_001505096.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EW995_RS24945 (128110) 128110..128340 - 231 WP_001505095.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
EW995_RS24950 (128927) 128927..129277 + 351 WP_000493398.1 hypothetical protein -
EW995_RS24955 (129321) 129321..129536 + 216 Protein_163 hypothetical protein -
EW995_RS24960 (129588) 129588..130292 - 705 WP_216349507.1 IS6 family transposase IS15DI Transposase
EW995_RS24965 (130283) 130283..130789 + 507 WP_001505085.1 hypothetical protein -
EW995_RS24970 (130786) 130786..131577 + 792 Protein_166 IS91 family transposase ISSod25 Transposase
EW995_RS24975 (131715) 131715..131990 - 276 WP_000239529.1 hypothetical protein -
EW995_RS24980 (131984) 131984..132628 - 645 WP_000633913.1 division plane positioning ATPase MipZ -
EW995_RS24985 (132857) 132857..133828 + 972 WP_001103690.1 plasmid segregation protein ParM -
EW995_RS24990 (133833) 133833..134225 + 393 WP_000340829.1 plasmid partitioning/stability family protein -
EW995_RS24995 (134230) 134230..134649 - 420 Protein_171 DUF4113 domain-containing protein -
EW995_RS25000 (134704) 134704..135381 + 678 WP_216349506.1 IS66 family transposase ISCro1 Transposase
EW995_RS25005 (135381) 135381..135728 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EW995_RS25010 (135748) 135748..137319 + 1572 WP_216349491.1 IS66 family transposase ISCro1 Transposase
EW995_RS25015 (137668) 137668..141762 - 4095 WP_134737245.1 Serine protease EatA VF
EW995_RS25020 (142483) 142483..142895 - 413 Protein_176 Tn3 family transposase -
EW995_RS25030 (144675) 144675..145166 - 492 Protein_178 IS91 family transposase ISSbo1 Transposase
EW995_RS25035 (145147) 145147..145419 - 273 WP_134742656.1 hypothetical protein -
EW995_RS25040 (145734) 145734..146510 + 777 WP_001378495.1 Heat-labile enterotoxin A chain VF
EW995_RS25045 (146507) 146507..146881 + 375 WP_024167121.1 Heat-labile enterotoxin B chain VF
EW995_RS25050 (147203) 147203..147937 - 735 Protein_182 IS3 family transposase ISSd1 Transposase
EW995_RS25055 (147973) 147973..149186 - 1214 Protein_183 IS3 family transposase IS629 Transposase
EW995_RS25060 (149212) 149212..149967 - 756 WP_134737243.1 IS3 family transposase ISEcB1 Transposase
EW995_RS25065 (149943) 149943..150449 - 507 WP_074504062.1 IS3 family transposase ISBope1 Transposase
EW995_RS25070 (150502) 150502..150756 + 255 WP_167553975.1 hypothetical protein -
EW995_RS25075 (151221) 151221..151469 + 249 WP_134737242.1 type II toxin-antitoxin system HicA family toxin Toxin Detail
EW995_RS25080 (151466) 151466..151813 + 348 WP_000681610.1 type II toxin-antitoxin system HicB family antitoxin Antitoxin Detail
EW995_RS25085 (152040) 152040..153217 - 1178 Protein_189 IS91 family transposase ISEc37 Transposase
EW995_RS25090 (153217) 153217..153582 - 366 WP_074480516.1 transposase -
EW995_RS25095 (153664) 153664..154272 + 609 Protein_191 IS3 family transposase IS2 Transposase
EW995_RS25100 (154475) 154475..156286 + 1812 WP_167553976.1 Heme/hemopexin transporter protein HuxB VF
EW995_RS25105 (156376) 156376..160911 + 4536 WP_216349508.1 Heme/hemopexin-binding protein VF
EW995_RS25110 (160936) 160936..161115 + 180 WP_250192314.1 hypothetical protein -
EW995_RS25115 (161194) 161194..163107 + 1914 WP_134737218.1 UDP-glucose:protein N-beta-glucosyltransferase VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance