MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 147979 bp
Accession: NZ_CP035842        Location: 1..147979         Organism: Escherichia coli strain TW10722       Replicon: plasmid pTW10722_147


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EXA02_RS25730 (1050) 1050..1475 + 426 WP_001198880.1 antirestriction protein -
EXA02_RS25735 (1522) 1522..1944 + 423 WP_000271732.1 DUF1380 family protein -
EXA02_RS25740 (1941) 1941..2132 + 192 WP_001024838.1 hypothetical protein -
EXA02_RS25745 (2445) 2445..4112 - 1668 WP_001091723.1 group II intron reverse transcriptase/maturase -
EXA02_RS28455 (4841) 4841..5014 - 174 Protein_5 hypothetical protein -
EXA02_RS25755 (5512) 5512..5742 + 231 WP_000218642.1 hypothetical protein -
EXA02_RS25760 (5794) 5794..7155 + 1362 WP_000170657.1 DUF3560 domain-containing protein -
EXA02_RS25765 (7201) 7201..7764 + 564 WP_001297832.1 class I SAM-dependent methyltransferase -
EXA02_RS28460 (7850) 7850..8276 - 427 Protein_9 hypothetical protein -
EXA02_RS25770 (8578) 8578..9105 + 528 WP_000290803.1 single-stranded DNA-binding protein -
EXA02_RS25775 (9162) 9162..9395 + 234 WP_000005971.1 DUF905 domain-containing protein -
EXA02_RS25780 (9459) 9459..11423 + 1965 Protein_12 ParB/RepB/Spo0J family partition protein -
EXA02_RS25785 (11478) 11478..11912 + 435 WP_000845950.1 conjugation system SOS inhibitor PsiB -
EXA02_RS25790 (11909) 11909..12628 + 720 WP_000994094.1 plasmid SOS inhibition protein A -
EXA02_RS25795 (12625) 12625..12939 + 315 WP_000872086.1 hypothetical protein -
- (12896) 12896..13095 + 200 NuclAT_0 - -
- (12896) 12896..13095 + 200 NuclAT_0 - -
- (12896) 12896..13095 + 200 NuclAT_0 - -
- (12896) 12896..13095 + 200 NuclAT_0 - -
EXA02_RS28465 (13129) 13129..13242 + 114 Protein_16 DUF5431 family protein -
EXA02_RS25800 (13187) 13187..13309 + 123 WP_223195199.1 Hok/Gef family protein -
EXA02_RS25805 (13610) 13610..13907 - 298 Protein_18 hypothetical protein -
EXA02_RS25810 (14204) 14204..14500 + 297 WP_001272251.1 hypothetical protein -
EXA02_RS25815 (14611) 14611..15432 + 822 WP_001234442.1 DUF932 domain-containing protein -
EXA02_RS25820 (15729) 15729..16319 - 591 WP_000252686.1 hypothetical protein VF
EXA02_RS25825 (16654) 16654..17037 + 384 WP_000124827.1 conjugal transfer relaxosome DNA-binding protein TraM -
EXA02_RS25830 (17231) 17231..17902 + 672 WP_000283565.1 conjugal transfer transcriptional regulator TraJ -
EXA02_RS25835 (18039) 18039..18266 + 228 WP_000089263.1 conjugal transfer relaxosome protein TraY -
EXA02_RS25840 (18299) 18299..18661 + 363 WP_001098986.1 type IV conjugative transfer system pilin TraA -
EXA02_RS25845 (18666) 18666..18977 + 312 WP_001117572.1 type IV conjugative transfer system protein TraL -
EXA02_RS25850 (18999) 18999..19565 + 567 WP_000399780.1 type IV conjugative transfer system protein TraE -
EXA02_RS25855 (19552) 19552..20280 + 729 WP_001230779.1 type-F conjugative transfer system secretin TraK -
EXA02_RS25860 (20280) 20280..21731 + 1452 WP_000146678.1 F-type conjugal transfer pilus assembly protein TraB -
EXA02_RS25865 (21721) 21721..21870 + 150 Protein_30 conjugal transfer protein TraP -
EXA02_RS25870 (21957) 21957..22391 + 435 WP_001403014.1 IS66 family transposase ISEc43 Transposase
EXA02_RS25875 (22388) 22388..22738 + 351 WP_000624688.1 IS66 family transposase ISEc47 Transposase
EXA02_RS25880 (22769) 22769..24382 + 1614 WP_001744949.1 IS66 family transposase ISEc47 Transposase
EXA02_RS25885 (24437) 24437..24649 + 213 WP_001301409.1 ANR family transcriptional regulator -
EXA02_RS25890 (24895) 24895..25356 + 462 WP_001233850.1 thermonuclease family protein -
EXA02_RS25895 (25402) 25402..25611 + 210 WP_001353639.1 Hha/YmoA family nucleoid-associated regulatory protein -
EXA02_RS25900 (25649) 25649..26239 + 591 WP_000766827.1 DUF2726 domain-containing protein -
EXA02_RS25905 (26479) 26479..26727 + 249 WP_000083840.1 replication regulatory protein RepA -
EXA02_RS25910 (26972) 26972..27046 + 75 WP_001365705.1 RepA leader peptide Tap -
EXA02_RS25915 (27039) 27039..27896 + 858 WP_000130987.1 incFII family plasmid replication initiator RepA -
EXA02_RS25920 (28597) 28597..28764 + 168 WP_000841011.1 hypothetical protein -
EXA02_RS25925 (28851) 28851..29102 + 252 WP_001139207.1 plasmid stabilization protein Antitoxin Detail
EXA02_RS25930 (29099) 29099..29386 + 288 WP_000222775.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
EXA02_RS25935 (29396) 29396..29926 + 531 WP_253207422.1 hypothetical protein -
EXA02_RS25940 (30592) 30592..31194 - 603 WP_000517689.1 ProQ/FINO family protein -
EXA02_RS25945 (31548) 31548..31796 + 249 Protein_46 hypothetical protein -
EXA02_RS25950 (31835) 31835..33373 - 1539 WP_000998069.1 IS66 family transposase ISEc8 Transposase
EXA02_RS25955 (33423) 33423..33770 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
EXA02_RS25960 (33767) 33767..34147 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
EXA02_RS25965 (34240) 34240..34935 + 696 Protein_50 hypothetical protein -
EXA02_RS25970 (35002) 35002..35784 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
EXA02_RS25975 (35781) 35781..36803 - 1023 WP_001356151.1 IS21 family transposase IS100kyp Transposase
EXA02_RS25980 (36890) 36890..37207 - 318 Protein_53 IS66 family transposase ISEc8 Transposase
EXA02_RS25985 (37261) 37261..37938 + 678 WP_001711999.1 IS66 family transposase ISCro1 Transposase
EXA02_RS25990 (37938) 37938..38285 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EXA02_RS25995 (38305) 38305..39876 + 1572 WP_100004375.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26000 (39906) 39906..40157 + 252 Protein_57 DUF4113 domain-containing protein -
EXA02_RS26005 (40162) 40162..40554 - 393 WP_000340828.1 plasmid partitioning/stability family protein -
EXA02_RS26010 (40559) 40559..41530 - 972 WP_001103696.1 plasmid segregation protein ParM -
EXA02_RS26015 (41759) 41759..42403 + 645 WP_000633916.1 division plane positioning ATPase MipZ -
EXA02_RS26020 (42397) 42397..42672 + 276 WP_000239529.1 hypothetical protein -
EXA02_RS26025 (42810) 42810..43607 - 798 WP_000016490.1 IS91 family transposase ISSod25 Transposase
EXA02_RS26030 (43604) 43604..44293 - 690 WP_000796232.1 hypothetical protein -
EXA02_RS26035 (45104) 45104..46435 + 1332 WP_001658347.1 group II intron reverse transcriptase/maturase -
EXA02_RS26040 (46546) 46546..46944 + 399 Protein_65 contractile injection system protein, VgrG/Pvc8 family -
EXA02_RS26045 (46987) 46987..47247 + 261 WP_000488107.1 ogr/Delta-like zinc finger family protein -
EXA02_RS26050 (47438) 47438..47578 + 141 WP_000078916.1 Hok/Gef family protein -
EXA02_RS26055 (47756) 47756..48088 + 333 WP_001173923.1 hypothetical protein -
EXA02_RS28470 (48093) 48093..48374 + 282 WP_016607956.1 hypothetical protein -
EXA02_RS28475 (48437) 48437..49003 + 567 WP_071594475.1 type VI secretion system-associated protein TagO -
EXA02_RS26065 (49149) 49149..49307 + 159 Protein_71 topoisomerase C-terminal repeat-containing protein -
EXA02_RS26070 (49447) 49447..49710 + 264 WP_000063166.1 hypothetical protein -
EXA02_RS26075 (50643) 50643..50798 + 156 WP_000074142.1 hypothetical protein -
EXA02_RS26080 (50847) 50847..51839 + 993 WP_001398380.1 hypothetical protein -
EXA02_RS26085 (51941) 51941..52057 - 117 Protein_75 plasmid stabilization protein -
EXA02_RS26090 (52352) 52352..53374 - 1023 WP_001398381.1 IS110 family transposase ISSm1 Transposase
EXA02_RS26095 (53533) 53533..55359 - 1827 WP_001239408.1 AAA family ATPase -
EXA02_RS26100 (55390) 55390..55947 - 558 WP_001398382.1 Tn3 family transposase TnpR_TnEc1 Transposase
EXA02_RS26105 (56432) 56432..56779 - 348 WP_000142443.1 DUF6404 family protein -
EXA02_RS26110 (56908) 56908..57243 + 336 WP_001080730.1 colicin 1A immunity protein -
EXA02_RS26115 (57265) 57265..59145 - 1881 WP_021018667.1 colicin Ia central receptor-binding domain-containing protein -
EXA02_RS26120 (59424) 59424..59801 - 378 Protein_82 hypothetical protein -
EXA02_RS26125 (59888) 59888..60910 + 1023 WP_001356151.1 IS21 family transposase IS100kyp Transposase
EXA02_RS26130 (60907) 60907..61689 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
EXA02_RS26135 (61911) 61911..62258 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
EXA02_RS26140 (62255) 62255..62635 - 381 WP_001466366.1 IS66 family transposase ISEc8 Transposase
EXA02_RS26145 (62992) 62992..63798 - 807 WP_000099345.1 site-specific integrase -
EXA02_RS26150 (63799) 63799..64104 - 306 WP_001159861.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
EXA02_RS26155 (64106) 64106..64324 - 219 WP_000813631.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
EXA02_RS26160 (64879) 64879..65568 + 690 WP_001095858.1 helix-turn-helix domain-containing protein -
EXA02_RS26165 (65644) 65644..66756 + 1113 WP_024179954.1 IS4 family transposase IS421 Transposase
EXA02_RS26170 (66951) 66951..67640 - 690 WP_001433458.1 RES family NAD+ phosphorylase -
EXA02_RS26175 (68060) 68060..68290 + 231 WP_001261281.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
EXA02_RS26180 (68287) 68287..68703 + 417 WP_001044769.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EXA02_RS26185 (68879) 68879..69997 + 1119 Protein_95 IS3 family transposase ISEc17 Transposase
EXA02_RS28480 (70932) 70932..71705 + 774 WP_236923691.1 apolipoprotein acyltransferase -
EXA02_RS26195 (71724) 71724..71873 + 150 WP_001399277.1 IS21 family transposase IS100 Transposase
EXA02_RS26200 (72267) 72267..72494 - 228 WP_001757586.1 bacterial lipid A biosynthesis acyltransferase family protein -
EXA02_RS26205 (72746) 72746..73372 - 627 WP_000593827.1 Lipoprotein-releasing system ATP-binding protein LolD VF
EXA02_RS26210 (73365) 73365..74138 - 774 WP_021018664.1 hypothetical protein -
EXA02_RS26215 (74095) 74095..75300 - 1206 WP_001399279.1 TolC family protein -
EXA02_RS26220 (75297) 75297..76436 - 1140 WP_000336105.1 hypothetical protein -
EXA02_RS26225 (76719) 76719..77069 - 351 WP_071594470.1 hypothetical protein -
EXA02_RS26230 (77224) 77224..77604 + 381 Protein_104 IS3 family transposase ISKpn38 Transposase
EXA02_RS26235 (77634) 77634..77882 + 249 Protein_105 transposase domain-containing protein -
EXA02_RS28485 (77912) 77912..77992 - 81 Protein_106 transposase -
EXA02_RS26240 (78055) 78055..78288 + 234 Protein_107 IS66 family transposase IS682 Transposase
EXA02_RS26250 (79558) 79558..79740 + 183 Protein_109 IS3 family transposase -
EXA02_RS28490 (79782) 79782..79883 - 102 Protein_110 DUF3800 domain-containing protein -
EXA02_RS28495 (79969) 79969..80430 - 462 WP_001399017.1 hypothetical protein -
EXA02_RS28500 (80457) 80457..80732 - 276 WP_001399018.1 hypothetical protein -
EXA02_RS26260 (80745) 80745..81245 - 501 WP_000528933.1 HEPN family nuclease -
EXA02_RS26265 (81290) 81290..82828 - 1539 WP_000998068.1 IS66 family transposase ISEc8 Transposase
EXA02_RS26270 (82878) 82878..83225 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
EXA02_RS26275 (83222) 83222..83602 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
EXA02_RS26280 (83681) 83681..84463 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
EXA02_RS26285 (84460) 84460..85482 - 1023 WP_001356151.1 IS21 family transposase IS100kyp Transposase
EXA02_RS26290 (85972) 85972..86649 + 678 WP_001711999.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26295 (86649) 86649..86996 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26300 (87016) 87016..88587 + 1572 WP_000381381.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26305 (88777) 88777..88986 - 210 WP_001297500.1 hypothetical protein -
EXA02_RS26310 (89117) 89117..89677 - 561 WP_000840464.1 fertility inhibition protein FinO -
EXA02_RS26315 (89780) 89780..90640 - 861 WP_000704522.1 putative protein YcjY VF
EXA02_RS26320 (90699) 90699..91445 - 747 WP_000205720.1 conjugal transfer pilus acetylase TraX -
EXA02_RS26325 (91465) 91465..92436 - 972 Protein_126 Multifunctional conjugation protein TraI Relaxase
EXA02_RS26330 (92425) 92425..92778 + 354 Protein_127 IS66 family transposase ISEc43 Transposase
EXA02_RS26335 (93044) 93044..93294 - 251 Protein_128 IS5 family transposase IS903B Transposase
EXA02_RS26340 (93401) 93401..93619 - 219 WP_013188501.1 Heat-stable enterotoxin A3/A4 VF
EXA02_RS26345 (93997) 93997..94415 + 419 Protein_130 IS3 family transposase ISBmu11 Transposase
EXA02_RS26350 (94608) 94608..94937 + 330 WP_000493287.1 type II toxin-antitoxin system RelE/ParE family toxin -
EXA02_RS26355 (94918) 94918..95199 + 282 WP_000780220.1 helix-turn-helix transcriptional regulator -
EXA02_RS26360 (95577) 95577..96764 - 1188 WP_000937544.1 IS91 family transposase ISEc37 Transposase
EXA02_RS26365 (96764) 96764..97129 - 366 WP_001665141.1 hypothetical protein -
EXA02_RS26370 (97219) 97219..97446 + 228 Protein_135 IS5 family transposase IS903B Transposase
EXA02_RS26375 (97702) 97702..98166 + 465 WP_000750952.1 CS6 fimbrial subunit A VF
EXA02_RS26380 (98184) 98184..98687 + 504 WP_000913743.1 CS6 fimbrial subunit CssB -
EXA02_RS26385 (98740) 98740..99438 + 699 WP_000837510.1 Chaperone protein caf1M VF
EXA02_RS26390 (99395) 99395..101854 + 2460 WP_000978936.1 CS6 fimbrial usher CssD -
EXA02_RS26395 (102233) 102233..102490 + 258 Protein_140 IS3 family transposase IS911 Transposase
EXA02_RS26400 (102558) 102558..103714 + 1157 Protein_141 IS30 family transposase IS30D Transposase
EXA02_RS26405 (103727) 103727..104014 - 288 Protein_142 IS3 family transposase IS911 Transposase
EXA02_RS26410 (104066) 104066..105592 + 1527 WP_249822046.1 IS66 family transposase ISEc47 Transposase
EXA02_RS26415 (105713) 105713..106725 - 1013 Protein_144 IS30 family transposase IS30D Transposase
EXA02_RS26420 (106793) 106793..107050 - 258 Protein_145 IS3 family transposase IS911 Transposase
EXA02_RS26425 (107154) 107154..107476 - 323 Protein_146 IS66 family transposase -
EXA02_RS26430 (107502) 107502..107747 - 246 Protein_147 PerC family transcriptional regulator -
EXA02_RS26435 (107855) 107855..108976 - 1122 WP_216266931.1 fimbrial protein -
EXA02_RS28505 (108973) 108973..109647 - 675 WP_000464817.1 hypothetical protein -
EXA02_RS26445 (109661) 109661..110272 - 612 WP_000694232.1 hypothetical protein -
EXA02_RS26450 (110288) 110288..112732 - 2445 WP_001399372.1 TcfC E-set like domain-containing protein -
EXA02_RS26455 (112729) 112729..113403 - 675 WP_000699813.1 hypothetical protein -
EXA02_RS26460 (113460) 113460..114071 - 612 WP_000739895.1 CS5 fimbrial subunit VF
EXA02_RS26465 (114279) 114279..114646 - 368 Protein_154 IS3 family transposase -
EXA02_RS26475 (116019) 116019..117038 - 1020 WP_000878037.1 IS110 family transposase ISEc11 Transposase
EXA02_RS26480 (117172) 117172..117492 + 321 Protein_157 IS481 family transposase ISErsp1 Transposase
EXA02_RS26485 (117639) 117639..118845 + 1207 Protein_158 IS3 family transposase IS629 Transposase
EXA02_RS26490 (118927) 118927..119361 + 435 WP_001403014.1 IS66 family transposase ISEc43 Transposase
EXA02_RS26495 (119358) 119358..119708 + 351 WP_000624688.1 IS66 family transposase ISEc47 Transposase
EXA02_RS26500 (119739) 119739..121352 + 1614 WP_001744949.1 IS66 family transposase ISEc47 Transposase
EXA02_RS26505 (121435) 121435..121671 + 237 Protein_162 IS3 family transposase ISPpr7 Transposase
EXA02_RS26510 (121764) 121764..122176 + 413 Protein_163 Tn3 family transposase -
EXA02_RS26515 (122679) 122679..124010 + 1332 WP_000217401.1 group II intron reverse transcriptase/maturase -
EXA02_RS26520 (124809) 124809..128903 + 4095 WP_001045016.1 Serine protease EatA VF
EXA02_RS26525 (129151) 129151..129828 + 678 WP_001711999.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26530 (129828) 129828..130175 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26535 (130195) 130195..131766 + 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
EXA02_RS26540 (132062) 132062..132652 + 591 WP_001674494.1 hypothetical protein -
EXA02_RS26545 (132670) 132670..133017 - 348 WP_000142434.1 DUF6404 family protein -
EXA02_RS28510 (133313) 133313..133516 + 204 WP_236920223.1 hypothetical protein -
EXA02_RS26555 (133464) 133464..133682 - 219 Protein_172 IS481 family transposase ISErsp1 Transposase
EXA02_RS28515 (133710) 133710..133822 - 113 Protein_173 IS630 family transposase -
EXA02_RS26560 (133958) 133958..134818 + 861 WP_000588734.1 Right origin-binding protein VF
EXA02_RS26565 (135134) 135134..136262 + 1129 Protein_175 IS4 family transposase IS186A Transposase
EXA02_RS26575 (137998) 137998..138207 - 210 Protein_177 IS5 family transposase ISPan1 Transposase
EXA02_RS26580 (138389) 138389..139192 - 804 WP_000346360.1 CFA/I fimbrial subunit D VF
EXA02_RS26585 (139402) 139402..139605 + 204 WP_024169330.1 ANR family transcriptional regulator -
EXA02_RS28520 (139915) 139915..140001 - 87 Protein_180 hypothetical protein -
EXA02_RS26590 (140027) 140027..140206 - 180 Protein_181 transposase domain-containing protein -
EXA02_RS28525 (140364) 140364..140591 - 228 WP_236923692.1 group II intron maturase-specific domain-containing protein -
EXA02_RS26600 (140761) 140761..141879 - 1119 Protein_183 IS3 family transposase ISEc17 Transposase
EXA02_RS26605 (141943) 141943..142422 + 480 Protein_184 Tn3 family transposase ISPsy42 Transposase
EXA02_RS26610 (142454) 142454..142762 + 309 Protein_185 hypothetical protein -
EXA02_RS26615 (142884) 142884..143198 + 315 Protein_186 IS200-IS605 family transposase IS609 Transposase
EXA02_RS26620 (143311) 143311..143661 - 351 WP_001365718.1 plasmid partitioning/stability family protein -
EXA02_RS26625 (143664) 143664..144626 - 963 WP_000959884.1 plasmid segregation protein ParM -
EXA02_RS28530 (144773) 144773..145066 + 294 WP_032165740.1 hypothetical protein -
EXA02_RS26630 (145161) 145161..146063 + 903 WP_077627250.1 DUF1281 domain-containing protein -
EXA02_RS26635 (146067) 146067..146372 + 306 WP_013307862.1 hypothetical protein -
EXA02_RS26640 (146448) 146448..147131 + 684 WP_000086128.1 DNA methylase -
EXA02_RS26645 (147132) 147132..147353 + 222 WP_001104873.1 hypothetical protein -
EXA02_RS26650 (147283) 147283..147801 + 519 WP_235837487.1 DUF1380 family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance