MGE detailed information
MGE type: Genomic_island MGE length: 19772 bp
Accession: NZ_CP034589 Location: 1068707..1088478 Organism: Escherichia coli strain L37 Replicon: chromosome
Accession: NZ_CP034589 Location: 1068707..1088478 Organism: Escherichia coli strain L37 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKM58_RS05100 () | 1063858..1064772 | - | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| EKM58_RS05105 () | 1065013..1065813 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| EKM58_RS05110 () | 1065844..1066440 | + | 597 | Protein_968 | methyltransferase domain-containing protein | - |
| EKM58_RS05115 () | 1066488..1067846 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| EKM58_RS05120 () | 1067918..1068673 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| EKM58_RS05125 () | 1068707..1069429 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| EKM58_RS05130 () | 1069426..1069893 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| EKM58_RS05135 () | 1069958..1070689 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| EKM58_RS05145 () | 1071226..1071999 | + | 774 | WP_024168598.1 | hypothetical protein | - |
| EKM58_RS05150 () | 1072050..1072747 | + | 698 | Protein_975 | IS1 family transposase | - |
| EKM58_RS05155 () | 1072764..1073735 | + | 972 | Protein_976 | ISAs1 family transposase ISEc1 | Transposase |
| EKM58_RS05160 () | 1073776..1074546 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| EKM58_RS05165 () | 1074727..1075173 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EKM58_RS05170 () | 1075216..1077660 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| EKM58_RS05175 () | 1077900..1078478 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| EKM58_RS05180 () | 1078684..1079451 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| EKM58_RS05185 () | 1079422..1080162 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EKM58_RS05190 () | 1080318..1080587 | - | 270 | Protein_983 | type II toxin-antitoxin system YafQ family toxin | - |
| EKM58_RS05195 () | 1080590..1080850 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| EKM58_RS05200 () | 1081036..1081809 | + | 774 | WP_001355630.1 | Murein DD-endopeptidase MepH | VF |
| EKM58_RS05205 () | 1081985..1082482 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| EKM58_RS05210 () | 1082706..1084418 | - | 1713 | Protein_987 | Flagellar biosynthesis protein FlhA | VF |
| EKM58_RS05215 () | 1084390..1085175 | + | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| EKM58_RS05220 () | 1085246..1086301 | + | 1056 | WP_063501914.1 | DNA polymerase IV | - |
| EKM58_RS05225 () | 1086353..1086646 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EKM58_RS05230 () | 1086649..1087047 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EKM58_RS05235 () | 1087057..1087509 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| EKM58_RS05240 () | 1087755..1087958 | + | 204 | Protein_993 | RNA ligase RtcB family protein | - |
| EKM58_RS05245 () | 1087957..1088478 | + | 522 | Protein_994 | peptide chain release factor H | - |
| EKM58_RS05250 () | 1088535..1089992 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| EKM58_RS05255 () | 1090253..1090711 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EKM58_RS05260 () | 1090803..1092047 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1091307..1091387 | + | 81 | NuclAT_11 | - | - |
| - () | 1091307..1091387 | + | 81 | NuclAT_11 | - | - |
| - () | 1091307..1091387 | + | 81 | NuclAT_11 | - | - |
| - () | 1091307..1091387 | + | 81 | NuclAT_11 | - | - |
| EKM58_RS05265 () | 1092105..1092506 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.009 |