MGE detailed information
MGE type: Prophage MGE length: 52181 bp
Accession: NZ_CP034005 Location: 2040418..2092598 Organism: Staphylococcus aureus strain P1D7C1 Replicon: chromosome
Accession: NZ_CP034005 Location: 2040418..2092598 Organism: Staphylococcus aureus strain P1D7C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD70_RS10015 () | 2036916..2037206 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| EFD70_RS10020 () | 2037217..2038650 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
| EFD70_RS10025 () | 2039036..2039286 | + | 251 | Protein_1923 | sphingomyelin phosphodiesterase | - |
| EFD70_RS10030 () | 2039608..2039787 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD70_RS10035 () | 2040105..2040365 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD70_RS10040 () | 2040418..2040768 | - | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| EFD70_RS10045 () | 2041451..2041900 | + | 450 | WP_000727645.1 | chemotaxis-inhibiting protein CHIPS | - |
| EFD70_RS10050 () | 2041995..2042329 | - | 335 | Protein_1928 | SH3 domain-containing protein | - |
| EFD70_RS10055 () | 2042976..2043467 | - | 492 | WP_000920042.1 | staphylokinase | - |
| EFD70_RS10060 () | 2043658..2044413 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD70_RS10065 () | 2044425..2044679 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD70_RS10070 () | 2044731..2044838 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2044760..2044899 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044760..2044899 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044760..2044899 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044760..2044899 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD70_RS10075 () | 2044891..2045067 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD70_RS10080 () | 2045270..2046043 | - | 774 | WP_025174055.1 | staphylococcal enterotoxin type P | - |
| EFD70_RS10085 () | 2046464..2046838 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD70_RS10090 () | 2046894..2047181 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD70_RS10095 () | 2047227..2047379 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD70_RS10100 () | 2047372..2051154 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD70_RS10105 () | 2051170..2052654 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD70_RS10110 () | 2052651..2057180 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD70_RS14035 () | 2057237..2057374 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| EFD70_RS10115 () | 2057425..2057775 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD70_RS10120 () | 2057825..2058049 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD70_RS10125 () | 2058091..2058735 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD70_RS10130 () | 2058736..2059143 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD70_RS10135 () | 2059140..2059544 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD70_RS10140 () | 2059541..2059903 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD70_RS10145 () | 2059887..2060171 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD70_RS10150 () | 2060161..2060445 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD70_RS10155 () | 2060465..2061610 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD70_RS10160 () | 2061634..2062371 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD70_RS10165 () | 2062355..2063542 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD70_RS10170 () | 2063558..2065219 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD70_RS10175 () | 2065216..2065560 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD70_RS10180 () | 2065690..2065989 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD70_RS10185 () | 2066221..2066637 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD70_RS10190 () | 2066665..2066865 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD70_RS10195 () | 2066865..2067014 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD70_RS10200 () | 2067011..2067217 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD70_RS10205 () | 2067214..2067459 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD70_RS10210 () | 2067496..2068032 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD70_RS10215 () | 2068029..2068274 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD70_RS10220 () | 2068289..2068537 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD70_RS10225 () | 2068534..2068791 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD70_RS10230 () | 2068791..2069162 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD70_RS10235 () | 2069175..2069579 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD70_RS10240 () | 2069588..2069806 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD70_RS10245 () | 2069813..2070706 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD70_RS10250 () | 2070736..2071206 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD70_RS10255 () | 2071207..2071824 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD70_RS10260 () | 2071905..2072825 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD70_RS10265 () | 2072827..2074763 | - | 1937 | Protein_1972 | AAA family ATPase | - |
| EFD70_RS10270 () | 2074772..2075035 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD70_RS10275 () | 2075044..2075304 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD70_RS10280 () | 2075309..2075611 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD70_RS10285 () | 2075706..2075867 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD70_RS10290 () | 2075864..2076187 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD70_RS10295 () | 2076242..2076622 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD70_RS10300 () | 2076609..2076806 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD70_RS10305 () | 2076822..2077574 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD70_RS10310 () | 2077625..2077954 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD70_RS10315 () | 2077943..2078158 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD70_RS10320 () | 2078174..2078437 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD70_RS10325 () | 2078434..2078608 | - | 175 | Protein_1984 | transcriptional regulator | - |
| EFD70_RS10330 () | 2078571..2079284 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD70_RS10335 () | 2079300..2080232 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD70_RS10340 () | 2080238..2080579 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD70_RS10345 () | 2080783..2080965 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD70_RS10350 () | 2081065..2082048 | + | 984 | WP_001558608.1 | glycosyltransferase | - |
| EFD70_RS10355 () | 2082059..2082301 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD70_RS10360 () | 2082364..2083401 | + | 1038 | WP_000857180.1 | site-specific integrase | - |
| EFD70_RS10365 () | 2083452..2084282 | + | 831 | Protein_1992 | sphingomyelin phosphodiesterase | - |
| EFD70_RS10370 () | 2084520..2085536 | - | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| EFD70_RS10375 () | 2085558..2086613 | - | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| EFD70_RS10380 () | 2087049..2088272 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD70_RS10385 () | 2088775..2090082 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD70_RS10390 () | 2090622..2092238 | - | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| EFD70_RS10395 () | 2092314..2092598 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD70_RS10400 () | 2092773..2093516 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD70_RS10405 () | 2093541..2094800 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| EFD70_RS10410 () | 2094997..2095623 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD70_RS10415 () | 2095984..2096769 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD70_RS10420 () | 2097369..2097503 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.007 |