MGE detailed information
MGE type: Prophage MGE length: 58708 bp
Accession: NZ_CP034002 Location: 2036911..2095618 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Accession: NZ_CP034002 Location: 2036911..2095618 Organism: Staphylococcus aureus strain P1D8C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD71_RS09985 () | 2032417..2033097 | - | 681 | WP_156668035.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| EFD71_RS09990 () | 2033098..2033994 | - | 897 | WP_000991306.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| EFD71_RS09995 () | 2033991..2034371 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| EFD71_RS10000 () | 2034629..2034805 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| EFD71_RS10005 () | 2035048..2035146 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| EFD71_RS10010 () | 2035346..2036632 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| EFD71_RS10015 () | 2036911..2037201 | - | 291 | WP_000671712.1 | hypothetical protein | VF |
| EFD71_RS10020 () | 2037212..2038645 | - | 1434 | WP_001558588.1 | hypothetical protein | VF |
| EFD71_RS10025 () | 2039031..2039281 | + | 251 | Protein_1921 | hypothetical protein | VF |
| EFD71_RS10030 () | 2039603..2039782 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD71_RS10035 () | 2040100..2040360 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD71_RS10040 () | 2040413..2040763 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| EFD71_RS10045 () | 2041446..2041895 | + | 450 | WP_000727645.1 | hypothetical protein | VF |
| EFD71_RS10050 () | 2041990..2042324 | - | 335 | Protein_1926 | SH3 domain-containing protein | - |
| EFD71_RS10055 () | 2042971..2043462 | - | 492 | WP_000920042.1 | hypothetical protein | VF |
| EFD71_RS10060 () | 2043653..2044408 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD71_RS10065 () | 2044420..2044674 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD71_RS10070 () | 2044726..2044833 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2044755..2044894 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044755..2044894 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044755..2044894 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044755..2044894 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD71_RS10075 () | 2044886..2045062 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD71_RS10080 () | 2045265..2046038 | - | 774 | WP_025174055.1 | hypothetical protein | VF |
| EFD71_RS10085 () | 2046459..2046833 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD71_RS10090 () | 2046889..2047176 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD71_RS10095 () | 2047222..2047374 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD71_RS10100 () | 2047367..2051149 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD71_RS10105 () | 2051165..2052649 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD71_RS10110 () | 2052646..2057175 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD71_RS10115 () | 2057420..2057770 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD71_RS10120 () | 2057820..2058044 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD71_RS10125 () | 2058086..2058730 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD71_RS10130 () | 2058731..2059138 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD71_RS10135 () | 2059135..2059539 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD71_RS10140 () | 2059536..2059898 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD71_RS10145 () | 2059882..2060166 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD71_RS10150 () | 2060156..2060440 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD71_RS10155 () | 2060460..2061605 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD71_RS10160 () | 2061629..2062366 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD71_RS10165 () | 2062350..2063537 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD71_RS10170 () | 2063553..2065214 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD71_RS10175 () | 2065211..2065555 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD71_RS10180 () | 2065685..2065984 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD71_RS10185 () | 2066216..2066632 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD71_RS10190 () | 2066660..2066860 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD71_RS10195 () | 2066860..2067009 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD71_RS10200 () | 2067006..2067212 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD71_RS10205 () | 2067209..2067454 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD71_RS10210 () | 2067491..2068027 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD71_RS10215 () | 2068024..2068269 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD71_RS10220 () | 2068284..2068532 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD71_RS10225 () | 2068529..2068786 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD71_RS10230 () | 2068786..2069157 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD71_RS10235 () | 2069170..2069574 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD71_RS10240 () | 2069583..2069801 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD71_RS10245 () | 2069808..2070701 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD71_RS10250 () | 2070731..2071201 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD71_RS10255 () | 2071202..2071819 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD71_RS10260 () | 2071900..2072820 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD71_RS10265 () | 2072822..2074758 | - | 1937 | Protein_1969 | AAA family ATPase | - |
| EFD71_RS10270 () | 2074767..2075030 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD71_RS10275 () | 2075039..2075299 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD71_RS10280 () | 2075304..2075606 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD71_RS10285 () | 2075701..2075862 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD71_RS10290 () | 2075859..2076182 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD71_RS10295 () | 2076237..2076617 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD71_RS10300 () | 2076604..2076801 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD71_RS10305 () | 2076817..2077569 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD71_RS10310 () | 2077620..2077949 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD71_RS10315 () | 2077938..2078153 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD71_RS10320 () | 2078169..2078432 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD71_RS10325 () | 2078429..2078603 | - | 175 | Protein_1981 | transcriptional regulator | - |
| EFD71_RS10330 () | 2078566..2079279 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD71_RS10335 () | 2079295..2080227 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD71_RS10340 () | 2080233..2080574 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD71_RS10345 () | 2080778..2080960 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD71_RS10350 () | 2081060..2082043 | + | 984 | WP_001558608.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| EFD71_RS10355 () | 2082054..2082296 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD71_RS10360 () | 2082359..2083396 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD71_RS10365 () | 2083447..2084277 | + | 831 | Protein_1989 | hypothetical protein | VF |
| EFD71_RS10370 () | 2084515..2085531 | - | 1017 | WP_000595392.1 | hypothetical protein | VF |
| EFD71_RS10375 () | 2085553..2086608 | - | 1056 | WP_000791411.1 | hypothetical protein | VF |
| EFD71_RS10380 () | 2087044..2088267 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD71_RS10385 () | 2088770..2090077 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD71_RS10390 () | 2090617..2092233 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| EFD71_RS10395 () | 2092309..2092593 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD71_RS10400 () | 2092768..2093511 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD71_RS10405 () | 2093536..2094795 | - | 1260 | WP_000120297.1 | hypothetical protein | VF |
| EFD71_RS10410 () | 2094992..2095618 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD71_RS10415 () | 2095979..2096764 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD71_RS10420 () | 2097364..2097498 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| EFD71_RS10425 () | 2097734..2098297 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| EFD71_RS10430 () | 2098300..2098443 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| EFD71_RS10435 () | 2098473..2099756 | + | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| EFD71_RS10440 () | 2099775..2100491 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.01 |