MGE detailed information
MGE type: Prophage MGE length: 58708 bp
Accession: NZ_CP033999 Location: 2036917..2095624 Organism: Staphylococcus aureus strain P1D8C2 Replicon: chromosome
Accession: NZ_CP033999 Location: 2036917..2095624 Organism: Staphylococcus aureus strain P1D8C2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD72_RS09985 () | 2032423..2033103 | - | 681 | WP_156668035.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| EFD72_RS09990 () | 2033104..2034000 | - | 897 | WP_000991306.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| EFD72_RS09995 () | 2033997..2034377 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| EFD72_RS10000 () | 2034635..2034811 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| EFD72_RS10005 () | 2035054..2035152 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| EFD72_RS10010 () | 2035352..2036638 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| EFD72_RS10015 () | 2036917..2037207 | - | 291 | WP_000671712.1 | hypothetical protein | VF |
| EFD72_RS10020 () | 2037218..2038651 | - | 1434 | WP_001558588.1 | hypothetical protein | VF |
| EFD72_RS10025 () | 2039037..2039287 | + | 251 | Protein_1921 | hypothetical protein | VF |
| EFD72_RS10030 () | 2039609..2039788 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD72_RS10035 () | 2040106..2040366 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD72_RS10040 () | 2040419..2040769 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| EFD72_RS10045 () | 2041452..2041901 | + | 450 | WP_000727645.1 | hypothetical protein | VF |
| EFD72_RS10050 () | 2041996..2042330 | - | 335 | Protein_1926 | SH3 domain-containing protein | - |
| EFD72_RS10055 () | 2042977..2043468 | - | 492 | WP_000920042.1 | hypothetical protein | VF |
| EFD72_RS10060 () | 2043659..2044414 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD72_RS10065 () | 2044426..2044680 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD72_RS10070 () | 2044732..2044839 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2044761..2044900 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044761..2044900 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044761..2044900 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044761..2044900 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD72_RS10075 () | 2044892..2045068 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD72_RS10080 () | 2045271..2046044 | - | 774 | WP_025174055.1 | hypothetical protein | VF |
| EFD72_RS10085 () | 2046465..2046839 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD72_RS10090 () | 2046895..2047182 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD72_RS10095 () | 2047228..2047380 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD72_RS10100 () | 2047373..2051155 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD72_RS10105 () | 2051171..2052655 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD72_RS10110 () | 2052652..2057181 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD72_RS10115 () | 2057426..2057776 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD72_RS10120 () | 2057826..2058050 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD72_RS10125 () | 2058092..2058736 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD72_RS10130 () | 2058737..2059144 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD72_RS10135 () | 2059141..2059545 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD72_RS10140 () | 2059542..2059904 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD72_RS10145 () | 2059888..2060172 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD72_RS10150 () | 2060162..2060446 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD72_RS10155 () | 2060466..2061611 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD72_RS10160 () | 2061635..2062372 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD72_RS10165 () | 2062356..2063543 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD72_RS10170 () | 2063559..2065220 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD72_RS10175 () | 2065217..2065561 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD72_RS10180 () | 2065691..2065990 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD72_RS10185 () | 2066222..2066638 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD72_RS10190 () | 2066666..2066866 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD72_RS10195 () | 2066866..2067015 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD72_RS10200 () | 2067012..2067218 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD72_RS10205 () | 2067215..2067460 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD72_RS10210 () | 2067497..2068033 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD72_RS10215 () | 2068030..2068275 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD72_RS10220 () | 2068290..2068538 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD72_RS10225 () | 2068535..2068792 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD72_RS10230 () | 2068792..2069163 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD72_RS10235 () | 2069176..2069580 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD72_RS10240 () | 2069589..2069807 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD72_RS10245 () | 2069814..2070707 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD72_RS10250 () | 2070737..2071207 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD72_RS10255 () | 2071208..2071825 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD72_RS10260 () | 2071906..2072826 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD72_RS10265 () | 2072828..2074764 | - | 1937 | Protein_1969 | AAA family ATPase | - |
| EFD72_RS10270 () | 2074773..2075036 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD72_RS10275 () | 2075045..2075305 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD72_RS10280 () | 2075310..2075612 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD72_RS10285 () | 2075707..2075868 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD72_RS10290 () | 2075865..2076188 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD72_RS10295 () | 2076243..2076623 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD72_RS10300 () | 2076610..2076807 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD72_RS10305 () | 2076823..2077575 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD72_RS10310 () | 2077626..2077955 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD72_RS10315 () | 2077944..2078159 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD72_RS10320 () | 2078175..2078438 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD72_RS10325 () | 2078435..2078609 | - | 175 | Protein_1981 | transcriptional regulator | - |
| EFD72_RS10330 () | 2078572..2079285 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD72_RS10335 () | 2079301..2080233 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD72_RS10340 () | 2080239..2080580 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD72_RS10345 () | 2080784..2080966 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD72_RS10350 () | 2081066..2082049 | + | 984 | WP_001558608.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| EFD72_RS10355 () | 2082060..2082302 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD72_RS10360 () | 2082365..2083402 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD72_RS10365 () | 2083453..2084283 | + | 831 | Protein_1989 | hypothetical protein | VF |
| EFD72_RS10370 () | 2084521..2085537 | - | 1017 | WP_000595392.1 | hypothetical protein | VF |
| EFD72_RS10375 () | 2085559..2086614 | - | 1056 | WP_000791411.1 | hypothetical protein | VF |
| EFD72_RS10380 () | 2087050..2088273 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD72_RS10385 () | 2088776..2090083 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD72_RS10390 () | 2090623..2092239 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| EFD72_RS10395 () | 2092315..2092599 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD72_RS10400 () | 2092774..2093517 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD72_RS10405 () | 2093542..2094801 | - | 1260 | WP_000120297.1 | hypothetical protein | VF |
| EFD72_RS10410 () | 2094998..2095624 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD72_RS10415 () | 2095985..2096770 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD72_RS10420 () | 2097370..2097504 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| EFD72_RS10425 () | 2097740..2098303 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| EFD72_RS10430 () | 2098306..2098449 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| EFD72_RS10435 () | 2098479..2099762 | + | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| EFD72_RS10440 () | 2099781..2100497 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.01 |