MGE detailed information
MGE type: Conjugative plasmid MGE length: 61890 bp
Accession: NZ_CP033881 Location: 1..61890 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_4
Accession: NZ_CP033881 Location: 1..61890 Organism: Escherichia coli strain 50579417 Replicon: plasmid p50579417_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGM66_RS00670 () | 1419..1766 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| EGM66_RS00675 () | 1794..2012 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| EGM66_RS00680 () | 2111..2587 | - | 477 | WP_012881127.1 | hypothetical protein | - |
| EGM66_RS00685 () | 2580..2801 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| EGM66_RS00690 () | 2936..3451 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EGM66_RS00695 () | 3448..3816 | - | 369 | WP_001681801.1 | conjugal transfer protein TrbD | - |
| EGM66_RS00700 () | 3755..4345 | - | 591 | WP_012881129.1 | conjugal transfer protein TraP | - |
| EGM66_RS00705 () | 4335..5762 | - | 1428 | WP_012881130.1 | conjugal transfer protein TraB | - |
| EGM66_RS00710 () | 5762..6490 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| EGM66_RS00715 () | 6477..7043 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| EGM66_RS00720 () | 7065..7376 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| EGM66_RS00725 () | 7391..7753 | - | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| EGM66_RS00730 () | 7787..8026 | - | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| EGM66_RS00735 () | 8134..8781 | - | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| EGM66_RS00740 () | 8973..9356 | - | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| EGM66_RS00745 () | 9689..10279 | + | 591 | WP_000252683.1 | hypothetical protein | VF |
| EGM66_RS00750 () | 10576..11397 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| EGM66_RS00755 () | 11508..11804 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| EGM66_RS00765 () | 12196..12400 | + | 205 | Protein_19 | pilus protein | - |
| EGM66_RS00770 () | 12701..12859 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 12903..13127 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12903..13127 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12903..13127 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12903..13127 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| EGM66_RS27905 () | 12939..13118 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| EGM66_RS00775 () | 13139..13858 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| EGM66_RS00780 () | 13855..14289 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| EGM66_RS00785 () | 14358..16322 | - | 1965 | WP_060578230.1 | ParB/RepB/Spo0J family partition protein | - |
| EGM66_RS00790 () | 16383..16616 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| EGM66_RS00795 () | 16674..17201 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| EGM66_RS00805 () | 17503..17946 | + | 444 | WP_024187997.1 | hypothetical protein | - |
| EGM66_RS00815 () | 18032..18595 | - | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| EGM66_RS00820 () | 18642..20003 | - | 1362 | WP_000170670.1 | DUF3560 domain-containing protein | - |
| EGM66_RS00825 () | 20055..20285 | - | 231 | WP_000218644.1 | hypothetical protein | - |
| EGM66_RS28010 () | 20966..21284 | + | 319 | Protein_31 | pilus assembly protein | - |
| EGM66_RS00840 () | 21254..21445 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| EGM66_RS00845 () | 21442..21864 | - | 423 | WP_000271722.1 | DUF1380 family protein | - |
| EGM66_RS00850 () | 21911..22213 | - | 303 | WP_072257078.1 | antirestriction protein | - |
| EGM66_RS00865 () | 22752..23522 | - | 771 | WP_001006242.1 | hypothetical protein | - |
| EGM66_RS00870 () | 23567..24001 | - | 435 | WP_000274447.1 | DUF1380 family protein | - |
| EGM66_RS00875 () | 24015..24236 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| EGM66_RS00880 () | 24237..24920 | - | 684 | WP_060578183.1 | DNA methylase | - |
| EGM66_RS00885 () | 24997..25308 | - | 312 | WP_032146222.1 | hypothetical protein | - |
| EGM66_RS00890 () | 25305..26207 | - | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| EGM66_RS00895 () | 26744..27706 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| EGM66_RS00900 () | 27709..28059 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| EGM66_RS00905 () | 28172..28486 | - | 315 | Protein_43 | transposase | - |
| EGM66_RS00910 () | 28608..29090 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| EGM66_RS00915 () | 29207..30055 | - | 849 | WP_060578162.1 | 3'-5' exonuclease | - |
| EGM66_RS00920 () | 30090..30371 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGM66_RS00925 () | 30368..30637 | - | 270 | WP_001481137.1 | hypothetical protein | Antitoxin Detail |
| EGM66_RS00940 () | 31553..32410 | - | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| EGM66_RS00945 () | 32403..32477 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EGM66_RS00955 () | 32722..32970 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| EGM66_RS00960 () | 33255..33404 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 33449..33508 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33449..33508 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33449..33508 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33449..33508 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| EGM66_RS00970 () | 33651..34124 | - | 474 | WP_016240489.1 | hypothetical protein | - |
| EGM66_RS00975 () | 34279..34869 | - | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| EGM66_RS00980 () | 34907..35116 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| EGM66_RS00985 () | 35162..35623 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| EGM66_RS00990 () | 35868..36080 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| EGM66_RS00995 () | 36209..36769 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| EGM66_RS01000 () | 36872..37732 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| EGM66_RS01005 () | 37791..38537 | - | 747 | WP_060578161.1 | conjugal transfer pilus acetylase TraX | - |
| EGM66_RS01010 () | 38557..43827 | - | 5271 | WP_060578160.1 | Multifunctional conjugation protein TraI | Relaxase |
| EGM66_RS01015 () | 43827..46061 | - | 2235 | WP_123908718.1 | type IV conjugative transfer system coupling protein TraD | - |
| EGM66_RS01020 () | 46112..46849 | - | 738 | WP_012881122.1 | hypothetical protein | - |
| EGM66_RS01025 () | 47052..47783 | - | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| EGM66_RS01030 () | 47797..48306 | - | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| EGM66_RS01035 () | 48303..51128 | - | 2826 | WP_012881124.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EGM66_RS01040 () | 51125..52498 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| EGM66_RS01045 () | 52485..52910 | - | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| EGM66_RS01050 () | 52858..53205 | - | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| EGM66_RS01055 () | 53135..53680 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EGM66_RS01060 () | 53667..53951 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EGM66_RS01065 () | 54032..54367 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| EGM66_RS01070 () | 54348..54689 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| EGM66_RS01075 () | 54703..55446 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EGM66_RS01080 () | 55439..55696 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| EGM66_RS01085 () | 55723..57573 | - | 1851 | WP_012881125.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EGM66_RS01090 () | 57570..58208 | - | 639 | WP_060578158.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EGM66_RS01095 () | 58217..58522 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| EGM66_RS01100 () | 58552..59544 | - | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| EGM66_RS01105 () | 59541..60173 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EGM66_RS01110 () | 60170..60556 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|