MGE detailed information
MGE type: Genomic_island MGE length: 31880 bp
Accession: NZ_CP032667 Location: 1095941..1127820 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP032667 Location: 1095941..1127820 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8B36_RS05370 () | 1092125..1093393 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| D8B36_RS05375 () | 1093413..1094390 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| D8B36_RS05380 () | 1094726..1096978 | - | 2253 | Protein_1029 | alpha-amylase family protein | - |
| D8B36_RS22945 () | 1098364..1099737 | + | 1374 | Protein_1030 | DUF5507 domain-containing protein | - |
| D8B36_RS05405 () | 1100101..1100310 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| D8B36_RS22950 () | 1100465..1100584 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| D8B36_RS05410 () | 1100648..1105228 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| D8B36_RS05415 () | 1105592..1105921 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| D8B36_RS05420 () | 1105942..1106259 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| D8B36_RS05425 () | 1106297..1106497 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| D8B36_RS05430 () | 1106506..1106988 | - | 483 | WP_001407480.1 | RadC family protein | - |
| D8B36_RS05435 () | 1106997..1107455 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| D8B36_RS05440 () | 1107558..1107781 | - | 224 | Protein_1039 | DUF905 domain-containing protein | - |
| D8B36_RS05445 () | 1108353..1110056 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| D8B36_RS05450 () | 1110198..1111207 | + | 1010 | Protein_1041 | arsenic transporter | - |
| D8B36_RS05455 () | 1111220..1111534 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| D8B36_RS05460 () | 1111759..1112226 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| D8B36_RS05465 () | 1112250..1112693 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| D8B36_RS05470 () | 1112693..1112929 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| D8B36_RS05475 () | 1112970..1113671 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| D8B36_RS05480 () | 1113888..1114709 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| D8B36_RS05485 () | 1114801..1115664 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| D8B36_RS05490 () | 1116019..1116390 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| D8B36_RS05495 () | 1116383..1117456 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| D8B36_RS05500 () | 1117598..1117861 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| D8B36_RS05505 () | 1118221..1119837 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| D8B36_RS05510 () | 1119834..1122023 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| D8B36_RS05515 () | 1122201..1122827 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| D8B36_RS05520 () | 1122980..1124389 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| D8B36_RS05525 () | 1124518..1124730 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| D8B36_RS05530 () | 1124774..1125730 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| D8B36_RS05535 () | 1125974..1127215 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| D8B36_RS05545 () | 1127996..1128478 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| D8B36_RS05550 () | 1128649..1129086 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| D8B36_RS05555 () | 1129076..1129366 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| D8B36_RS05560 () | 1129428..1129769 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| D8B36_RS05565 () | 1129918..1131579 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| D8B36_RS05570 () | 1131665..1132543 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |