MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55415 bp
Accession: NZ_CP032394 Location: 1..55415 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 Replicon: plasmid p22453_2
Accession: NZ_CP032394 Location: 1..55415 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 Replicon: plasmid p22453_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5G00_RS24815 () | 919..1404 | + | 486 | WP_001281416.1 | Abi family protein | - |
| D5G00_RS24820 () | 1563..2690 | - | 1128 | WP_000156234.1 | hypothetical protein | - |
| D5G00_RS24825 () | 3768..4412 | - | 645 | WP_000203397.1 | recombinase family protein | - |
| D5G00_RS24830 () | 4486..8742 | + | 4257 | Protein_4 | conjugative transfer relaxase/helicase TraI | - |
| D5G00_RS24835 () | 8762..9502 | + | 741 | WP_000177628.1 | conjugal transfer pilus acetylase TraX | - |
| D5G00_RS24840 () | 9557..10120 | + | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| D5G00_RS24845 () | 10237..10689 | + | 453 | WP_000477656.1 | hypothetical protein | - |
| D5G00_RS24850 () | 10855..11298 | + | 444 | Protein_8 | phospholipase | - |
| D5G00_RS24855 () | 11477..11743 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| D5G00_RS24865 () | 11991..12068 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| D5G00_RS24870 () | 12049..12930 | + | 882 | WP_001675606.1 | incFII family plasmid replication initiator RepA | - |
| D5G00_RS24880 () | 13725..14119 | - | 395 | Protein_12 | transposase | - |
| D5G00_RS24885 () | 14149..14322 | - | 174 | WP_001675604.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| D5G00_RS26450 () | 14477..14674 | - | 198 | WP_001675602.1 | transposase | - |
| D5G00_RS24895 () | 14969..15763 | - | 795 | WP_001575508.1 | hypothetical protein | - |
| D5G00_RS24900 () | 15799..16458 | - | 660 | WP_001575507.1 | hypothetical protein | - |
| D5G00_RS24905 () | 17917..18189 | + | 273 | WP_001178538.1 | hypothetical protein | - |
| D5G00_RS24910 () | 18425..19222 | + | 798 | WP_000704721.1 | F4 (K88) fimbria minor subunit FaeH | - |
| D5G00_RS24915 () | 19250..20014 | + | 765 | WP_000827659.1 | K88 minor fimbrial subunit faeI | - |
| D5G00_RS24920 () | 20001..20276 | + | 276 | WP_001020576.1 | hypothetical protein | - |
| D5G00_RS24925 () | 20276..20989 | + | 714 | WP_000801115.1 | hypothetical protein | - |
| D5G00_RS24935 () | 21114..21698 | + | 585 | WP_001575501.1 | hypothetical protein | - |
| D5G00_RS24940 () | 21771..21983 | + | 213 | WP_000063794.1 | hypothetical protein | - |
| D5G00_RS26455 () | 22244..22405 | + | 162 | WP_001816720.1 | hypothetical protein | - |
| D5G00_RS24945 () | 22431..23279 | + | 849 | WP_000175391.1 | SdiA-regulated domain-containing protein | - |
| D5G00_RS24960 () | 23849..24277 | - | 429 | WP_000812999.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| D5G00_RS24965 () | 24274..24504 | - | 231 | WP_001261283.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D5G00_RS24970 () | 25249..25467 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D5G00_RS24975 () | 25469..25774 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D5G00_RS24985 () | 25844..26548 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| D5G00_RS24990 () | 26826..27161 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| D5G00_RS24995 () | 27218..27784 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| D5G00_RS25000 () | 27816..28758 | - | 943 | Protein_33 | Rpn family recombination-promoting nuclease/putative transposase | - |
| D5G00_RS25005 () | 29151..29771 | + | 621 | WP_000864788.1 | ParA family protein | - |
| D5G00_RS25010 () | 29823..30053 | + | 231 | WP_000051066.1 | partitioning protein | - |
| D5G00_RS25025 () | 30692..31114 | - | 423 | WP_000202949.1 | hypothetical protein | - |
| D5G00_RS25030 () | 31182..31628 | - | 447 | WP_001074381.1 | hypothetical protein | - |
| D5G00_RS25035 () | 31668..32504 | - | 837 | WP_001575533.1 | replication initiation protein | - |
| D5G00_RS25045 () | 33740..33991 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| D5G00_RS25050 () | 33981..34262 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5G00_RS25055 () | 34408..34731 | + | 324 | WP_001181909.1 | hypothetical protein | - |
| D5G00_RS25060 () | 34776..35021 | + | 246 | WP_000356542.1 | hypothetical protein | - |
| D5G00_RS25065 () | 35011..35226 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| D5G00_RS25070 () | 35319..35648 | + | 330 | WP_000866650.1 | hypothetical protein | - |
| D5G00_RS25075 () | 35691..35870 | + | 180 | WP_001575529.1 | hypothetical protein | - |
| D5G00_RS25080 () | 35940..36089 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| D5G00_RS25085 () | 36102..36374 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| D5G00_RS26590 () | 36631..36705 | + | 75 | Protein_48 | DNA distortion polypeptide 3 | - |
| D5G00_RS25095 () | 36700..37245 | + | 546 | WP_000757691.1 | hypothetical protein | - |
| D5G00_RS25100 () | 37248..38429 | + | 1182 | WP_000539536.1 | relaxase/mobilization nuclease domain-containing protein | - |
| D5G00_RS25105 () | 38775..39293 | + | 519 | WP_001675951.1 | ActX protein | - |
| D5G00_RS25110 () | 39223..39435 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| D5G00_RS25115 () | 39468..40115 | + | 648 | WP_000953526.1 | lytic transglycosylase domain-containing protein | - |
| D5G00_RS25120 () | 40093..40389 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| D5G00_RS25125 () | 40408..43161 | + | 2754 | WP_001675613.1 | VirB3 family type IV secretion system protein | - |
| D5G00_RS25130 () | 43172..43930 | + | 759 | WP_000744198.1 | pilus assembly protein | - |
| D5G00_RS25135 () | 43931..44158 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| D5G00_RS25140 () | 44168..45301 | + | 1134 | WP_000513456.1 | type IV secretion system protein | - |
| D5G00_RS25145 () | 45546..46259 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| D5G00_RS25150 () | 46264..47193 | + | 930 | WP_000783377.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| D5G00_RS25155 () | 47190..48395 | + | 1206 | WP_000139139.1 | TrbI/VirB10 family protein | - |
| D5G00_RS25160 () | 48397..49427 | + | 1031 | Protein_62 | P-type DNA transfer ATPase VirB11 | - |
| D5G00_RS25165 () | 49430..51265 | + | 1836 | WP_000053823.1 | type IV secretory system conjugative DNA transfer family protein | - |
| D5G00_RS25170 () | 51262..51675 | + | 414 | WP_001575522.1 | hypothetical protein | - |
| D5G00_RS25175 () | 51672..51974 | + | 303 | WP_015059377.1 | KikA protein | - |
| D5G00_RS26460 () | 52135..52281 | + | 147 | WP_000382583.1 | hypothetical protein | - |
| D5G00_RS25180 () | 52285..52860 | + | 576 | WP_001198970.1 | hypothetical protein | - |
| D5G00_RS25185 () | 52865..55018 | + | 2154 | WP_001235753.1 | type IA DNA topoisomerase | - |
| D5G00_RS25190 () | 55015..55221 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|