NZ_CP0320681..163224

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 163224 bp
Accession: NZ_CP032068        Location: 1..163224         Organism: Escherichia coli strain E166       Replicon: plasmid p.E166-P2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D2J89_RS24205 (1182) 1182..2375 + 1194 WP_000450494.1 GTP-binding protein -
D2J89_RS24210 (2553) 2553..2702 + 150 Protein_1 IS3 family transposase -
D2J89_RS24215 (3012) 3012..4401 + 1390 Protein_2 ISNCY family transposase -
D2J89_RS24225 (5233) 5233..5501 + 269 Protein_4 integrase core domain-containing protein -
D2J89_RS24235 (7001) 7001..7180 + 180 Protein_6 integrase core domain-containing protein -
D2J89_RS24240 (8477) 8477..9430 + 954 WP_000280980.1 omptin family outer membrane protease -
D2J89_RS24245 (9863) 9863..10972 + 1110 WP_000771475.1 SDR family oxidoreductase -
D2J89_RS24250 (11041) 11041..11943 + 903 WP_001312822.1 antimicrobial resistance protein Mig-14 -
D2J89_RS24255 (12317) 12317..12505 + 189 WP_014640565.1 hypothetical protein -
D2J89_RS24260 (12626) 12626..13366 + 741 WP_001066953.1 tyrosine-type recombinase/integrase -
D2J89_RS24265 (13651) 13651..14628 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
D2J89_RS24270 (15371) 15371..15694 + 324 Protein_13 helix-turn-helix domain-containing protein -
D2J89_RS24275 (15696) 15696..15800 + 105 Protein_14 AAA family ATPase -
D2J89_RS24280 (15861) 15861..16374 + 514 Protein_15 DUF4113 domain-containing protein -
D2J89_RS24285 (16376) 16376..16792 - 417 WP_001278813.1 plasmid partitioning/stability family protein -
D2J89_RS24290 (16785) 16785..17147 - 363 Protein_17 plasmid segregation protein ParM -
D2J89_RS24295 (17203) 17203..17900 + 698 WP_106425952.1 IS1-like element IS1A family transposase -
D2J89_RS24300 (18113) 18113..18421 - 309 WP_000030198.1 hypothetical protein -
D2J89_RS24305 (18508) 18508..19152 - 645 WP_001144036.1 ParA family protein -
D2J89_RS24310 (19332) 19332..20138 - 807 WP_001593069.1 site-specific integrase -
D2J89_RS24315 (20139) 20139..20444 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
D2J89_RS24320 (20446) 20446..20664 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
D2J89_RS24325 (21492) 21492..21782 - 291 WP_001229374.1 hypothetical protein -
D2J89_RS24330 (21782) 21782..22912 - 1131 WP_000542418.1 DUF4238 domain-containing protein -
D2J89_RS24335 (22942) 22942..24045 - 1104 WP_001127573.1 nucleotide-binding protein -
D2J89_RS24340 (24373) 24373..24630 + 258 WP_000371889.1 hypothetical protein -
D2J89_RS24345 (24630) 24630..25220 + 591 WP_000194553.1 hypothetical protein -
D2J89_RS24350 (25240) 25240..25587 - 348 WP_000142449.1 DUF6404 family protein -
D2J89_RS24355 (25716) 25716..26051 + 336 WP_001080736.1 colicin E1 family microcin immunity protein -
D2J89_RS24360 (26073) 26073..26432 - 360 WP_071599609.1 colicin-like pore-forming protein -
D2J89_RS24370 (27543) 27543..28457 + 915 WP_000286865.1 iron/manganese ABC transporter substrate-binding protein SitA -
D2J89_RS24375 (28457) 28457..29284 + 828 WP_000983718.1 iron/manganese ABC transporter ATP-binding protein SitB -
D2J89_RS24380 (29281) 29281..30138 + 858 WP_001101728.1 iron/manganese ABC transporter permease subunit SitC -
D2J89_RS24385 (30135) 30135..30992 + 858 WP_212407157.1 metal ABC transporter permease -
D2J89_RS24390 (31226) 31226..32931 - 1706 Protein_37 Tn3 family transposase -
D2J89_RS24395 (32896) 32896..33225 + 330 Protein_38 recombinase family protein -
D2J89_RS24400 (33506) 33506..34408 + 903 WP_000640873.1 manganese-dependent inorganic pyrophosphatase -
D2J89_RS24405 (34412) 34412..34840 + 429 WP_000063194.1 universal stress protein -
D2J89_RS24410 (34891) 34891..36135 + 1245 WP_225088619.1 phosphopyruvate hydratase -
D2J89_RS24415 (36476) 36476..36856 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
D2J89_RS24420 (37236) 37236..38429 - 1194 WP_001593064.1 MFS transporter -
D2J89_RS24425 (38565) 38565..40289 + 1725 WP_000602863.1 NIS family aerobactin synthetase IucA -
D2J89_RS24430 (40290) 40290..41237 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase IucB -
D2J89_RS24435 (41237) 41237..42979 + 1743 WP_001015721.1 NIS family aerobactin synthetase IucC -
D2J89_RS24440 (42976) 42976..44309 + 1334 Protein_47 NADPH-dependent L-lysine N(6)-monooxygenase IucD -
D2J89_RS24445 (44335) 44335..46536 + 2202 WP_000973519.1 ferric aerobactin receptor IutA -
D2J89_RS24450 (47062) 47062..47759 + 698 Protein_49 IS1-like element IS1A family transposase -
D2J89_RS24455 (47926) 47926..48279 + 354 WP_000864812.1 colicin M immunity protein -
D2J89_RS24460 (48329) 48329..49144 - 816 WP_001382745.1 lipid II-degrading bacteriocin colicin M -
D2J89_RS24465 (49387) 49387..49914 + 528 WP_000203268.1 colicin B immunity protein -
D2J89_RS24470 (49932) 49932..51467 - 1536 WP_001282376.1 pore-forming bacteriocin colicin B -
D2J89_RS24475 (51908) 51908..52420 + 513 WP_001027529.1 hypothetical protein -
D2J89_RS24480 (52571) 52571..52921 - 351 WP_000361384.1 plasmid partitioning/stability family protein -
D2J89_RS24485 (52924) 52924..53886 - 963 WP_000959880.1 plasmid segregation protein ParM -
D2J89_RS24490 (54034) 54034..54327 + 294 WP_061336563.1 hypothetical protein -
D2J89_RS24495 (54404) 54404..55087 + 684 WP_000085940.1 DNA methylase -
D2J89_RS24500 (55088) 55088..55309 + 222 WP_001104873.1 hypothetical protein -
D2J89_RS24505 (55239) 55239..55757 + 519 WP_224550733.1 DUF1380 family protein -
D2J89_RS24510 (55802) 55802..56571 + 770 Protein_61 hypothetical protein -
D2J89_RS24515 (56988) 56988..57413 + 426 WP_001198930.1 antirestriction protein -
D2J89_RS24520 (57460) 57460..57882 + 423 WP_000271733.1 DUF1380 family protein -
D2J89_RS24525 (57879) 57879..58070 + 192 WP_001027500.1 hypothetical protein -
D2J89_RS24530 (58049) 58049..58517 - 469 Protein_65 hypothetical protein -
D2J89_RS24535 (59032) 59032..59262 + 231 WP_000218649.1 hypothetical protein -
D2J89_RS24540 (59314) 59314..60675 + 1362 WP_212407161.1 DUF3560 domain-containing protein -
D2J89_RS24545 (60722) 60722..61285 + 564 WP_001333938.1 class I SAM-dependent methyltransferase -
D2J89_RS25960 (61371) 61371..61728 - 358 Protein_69 hypothetical protein -
D2J89_RS24550 (61751) 61751..62722 - 972 WP_000082158.1 IS110 family transposase -
D2J89_RS25965 (62893) 62893..62973 - 81 Protein_71 hypothetical protein -
D2J89_RS24555 (63043) 63043..63249 + 207 WP_000547969.1 hypothetical protein -
D2J89_RS24560 (63275) 63275..63814 + 540 WP_001593051.1 single-stranded DNA-binding protein -
D2J89_RS24565 (63872) 63872..64105 + 234 WP_000005985.1 DUF905 family protein -
D2J89_RS24570 (64164) 64164..66128 + 1965 WP_001611034.1 ParB/RepB/Spo0J family partition protein -
D2J89_RS24575 (66197) 66197..66631 + 435 WP_000845962.1 conjugation system SOS inhibitor PsiB -
D2J89_RS24580 (66628) 66628..67390 + 763 Protein_77 plasmid SOS inhibition protein A -
- (67359) 67359..67583 + 225 NuclAT_0 - -
- (67359) 67359..67583 + 225 NuclAT_0 - -
- (67359) 67359..67583 + 225 NuclAT_0 - -
- (67359) 67359..67583 + 225 NuclAT_0 - -
D2J89_RS25970 (67569) 67569..67718 + 150 Protein_78 plasmid maintenance protein Mok -
D2J89_RS24585 (67660) 67660..67785 + 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
D2J89_RS25975 (68086) 68086..68359 - 274 Protein_80 hypothetical protein -
D2J89_RS24590 (68411) 68411..68707 + 297 WP_001272245.1 hypothetical protein -
D2J89_RS24595 (68818) 68818..69639 + 822 WP_001234487.1 DUF932 domain-containing protein -
D2J89_RS24600 (69936) 69936..70526 - 591 WP_001376243.1 transglycosylase SLT domain-containing protein -
D2J89_RS24605 (70859) 70859..71242 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
D2J89_RS24610 (71429) 71429..72118 + 690 Protein_85 conjugal transfer transcriptional regulator TraJ -
D2J89_RS24615 (72211) 72211..72612 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
D2J89_RS24620 (72645) 72645..73010 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
D2J89_RS24625 (73025) 73025..73336 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
D2J89_RS24630 (73358) 73358..73924 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
D2J89_RS24635 (73911) 73911..74639 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
D2J89_RS24640 (74639) 74639..76066 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
D2J89_RS24645 (76056) 76056..76646 + 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
D2J89_RS24650 (76633) 76633..76830 + 198 WP_001324648.1 conjugal transfer protein TrbD -
D2J89_RS24655 (76842) 76842..77093 + 252 WP_001038342.1 conjugal transfer protein TrbG -
D2J89_RS24660 (77090) 77090..77605 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
D2J89_RS24665 (77740) 77740..77961 + 222 WP_001278689.1 conjugal transfer protein TraR -
D2J89_RS24670 (78121) 78121..80748 + 2628 WP_001064245.1 type IV secretion system protein TraC -
D2J89_RS24675 (80745) 80745..81131 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
D2J89_RS24680 (81128) 81128..81760 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
D2J89_RS24685 (81757) 81757..82749 + 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
D2J89_RS24690 (82758) 82758..83396 + 639 WP_000777695.1 type-F conjugative transfer system pilin assembly protein TrbC -
D2J89_RS24695 (83393) 83393..85201 + 1809 WP_212407153.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
D2J89_RS24700 (85228) 85228..85485 + 258 WP_000864318.1 conjugal transfer protein TrbE -
D2J89_RS24705 (85478) 85478..86221 + 744 WP_001030377.1 type-F conjugative transfer system pilin assembly protein TraF -
D2J89_RS24710 (86237) 86237..86584 + 348 WP_001287910.1 conjugal transfer protein TrbA -
D2J89_RS24715 (86586) 86586..86900 - 315 WP_000415566.1 protein ArtA -
D2J89_RS24720 (86981) 86981..87265 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
D2J89_RS24725 (87252) 87252..87797 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
D2J89_RS24730 (87727) 87727..88068 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
D2J89_RS24735 (88055) 88055..88435 + 381 WP_001680290.1 F-type conjugal transfer protein TrbF -
D2J89_RS24740 (88435) 88435..89808 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
D2J89_RS24745 (89805) 89805..92627 + 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
D2J89_RS24750 (92643) 92643..93140 + 498 WP_000605858.1 hypothetical protein -
D2J89_RS24755 (93172) 93172..93903 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
D2J89_RS24760 (94156) 94156..96336 + 2181 WP_000009323.1 type IV conjugative transfer system coupling protein TraD -
D2J89_RS24765 (96345) 96345..96743 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
D2J89_RS24770 (96743) 96743..96970 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
D2J89_RS24775 (97052) 97052..102322 + 5271 WP_001611029.1 conjugative transfer relaxase/helicase TraI -
D2J89_RS24780 (102342) 102342..103088 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
D2J89_RS24785 (103147) 103147..104007 + 861 WP_000704513.1 alpha/beta hydrolase -
D2J89_RS24790 (104110) 104110..104670 + 561 WP_000139315.1 fertility inhibition protein FinO -
D2J89_RS24795 (104806) 104806..105018 + 213 WP_001299730.1 ANR family transcriptional regulator -
D2J89_RS24800 (105264) 105264..105338 + 75 Protein_123 endonuclease -
- (105594) 105594..105655 - 62 NuclAT_1 - Antitoxin Detail
- (105594) 105594..105655 - 62 NuclAT_1 - Antitoxin Detail
- (105594) 105594..105655 - 62 NuclAT_1 - Antitoxin Detail
- (105594) 105594..105655 - 62 NuclAT_1 - Antitoxin Detail
D2J89_RS24805 (105699) 105699..105848 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
D2J89_RS24810 (106132) 106132..106389 + 258 WP_000083845.1 replication regulatory protein RepA -
D2J89_RS25980 (106406) 106406..106657 - 252 WP_223195197.1 replication protein RepA -
D2J89_RS25985 (106648) 106648..106695 + 48 WP_229471593.1 hypothetical protein -
D2J89_RS24820 (106688) 106688..107170 + 483 WP_001273588.1 hypothetical protein -
D2J89_RS24825 (107163) 107163..108020 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
D2J89_RS24830 (108959) 108959..109612 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
D2J89_RS24835 (109705) 109705..109962 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
D2J89_RS24840 (109895) 109895..110296 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
D2J89_RS24845 (110545) 110545..111242 + 698 WP_095033700.1 IS1-like element IS1B family transposase -
D2J89_RS24850 (111265) 111265..111738 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
D2J89_RS24855 (111896) 111896..112909 + 1014 WP_000845048.1 class 1 integron integrase IntI1 -
D2J89_RS24860 (113112) 113112..113462 + 351 WP_000454193.1 DUF3330 domain-containing protein -
D2J89_RS24865 (113588) 113588..114148 + 561 WP_000147567.1 recombinase family protein -
D2J89_RS24870 (114151) 114151..117117 + 2967 WP_001138064.1 Tn3-like element TnAs3 family transposase -
D2J89_RS24875 (117203) 117203..117757 + 555 WP_000616063.1 phospholipase D family protein -
D2J89_RS24880 (117770) 117770..118252 + 483 WP_033544604.1 GNAT family protein -
D2J89_RS24885 (118421) 118421..118993 + 573 WP_135687074.1 IS6 family transposase -
D2J89_RS24890 (118999) 118999..119139 + 141 WP_001044210.1 hypothetical protein -
D2J89_RS24895 (119625) 119625..120362 + 738 WP_001366550.1 recombinase family protein -
D2J89_RS24900 (120359) 120359..120583 + 225 WP_000743213.1 hypothetical protein -
D2J89_RS24905 (120794) 120794..122250 + 1457 Protein_145 IS91 family transposase -
D2J89_RS25990 (122281) 122281..123165 + 885 WP_021598067.1 DUF3363 domain-containing protein -
D2J89_RS24915 (123382) 123382..124596 + 1215 WP_023300759.1 chloramphenicol/florfenicol efflux MFS transporter FloR -
D2J89_RS24920 (124624) 124624..124929 + 306 WP_001255015.1 LysR family transcriptional regulator -
D2J89_RS24925 (125041) 125041..125229 + 189 Protein_149 IS91 family transposase -
D2J89_RS24930 (125196) 125196..126395 - 1200 WP_032153701.1 tetracycline efflux MFS transporter Tet(A) -
D2J89_RS24935 (126501) 126501..127151 + 651 WP_001493764.1 tetracycline resistance transcriptional repressor TetR(A) -
D2J89_RS24940 (127183) 127183..127425 - 243 WP_000844627.1 transposase -
D2J89_RS24945 (127731) 127731..128567 - 837 WP_000480972.1 aminoglycoside O-phosphotransferase APH(6)-Id -
D2J89_RS24950 (128567) 128567..129370 - 804 WP_001082319.1 aminoglycoside O-phosphotransferase APH(3'')-Ib -
D2J89_RS24955 (129431) 129431..130246 - 816 WP_001043260.1 sulfonamide-resistant dihydropteroate synthase Sul2 -
D2J89_RS25995 (130576) 130576..130662 + 87 Protein_156 Arm DNA-binding domain-containing protein -
D2J89_RS24965 (130934) 130934..131689 - 756 Protein_157 IS110-like element IS5075 family transposase -
D2J89_RS24970 (131742) 131742..132446 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
D2J89_RS24975 (132514) 132514..133812 + 1299 Protein_159 Tn3-like element Tn3 family transposase -
D2J89_RS24980 (133846) 133846..134562 + 717 Protein_160 Tn3 family transposase -
D2J89_RS24990 (134672) 134672..134950 + 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB -
D2J89_RS24995 (134996) 134996..135844 + 849 WP_023154360.1 3'-5' exonuclease -
D2J89_RS25000 (135961) 135961..136443 + 483 WP_001311056.1 hypothetical protein -
D2J89_RS25005 (136745) 136745..137092 + 348 WP_000142450.1 DUF6404 family protein -
D2J89_RS25010 (137110) 137110..137295 - 186 Protein_165 hypothetical protein -
D2J89_RS25015 (137521) 137521..141336 + 3816 WP_251364691.1 hypothetical protein -
D2J89_RS25020 (141868) 141868..142218 + 351 WP_000493379.1 hypothetical protein -
D2J89_RS25025 (142262) 142262..142951 + 690 WP_000796228.1 hypothetical protein -
D2J89_RS25030 (142948) 142948..143739 + 792 WP_000016493.1 site-specific integrase -
D2J89_RS25035 (143917) 143917..144270 + 354 WP_000864812.1 colicin M immunity protein -
D2J89_RS25040 (144320) 144320..145135 - 816 WP_001382745.1 lipid II-degrading bacteriocin colicin M -
D2J89_RS25045 (145379) 145379..145906 + 528 WP_000203272.1 colicin B immunity protein -
D2J89_RS25050 (145924) 145924..146091 - 168 Protein_173 colicin-B -
D2J89_RS25055 (146264) 146264..146467 + 204 Protein_174 hypothetical protein -
D2J89_RS25060 (147009) 147009..147245 + 237 WP_014640552.1 colicin V immunity protein -
D2J89_RS25065 (147223) 147223..147420 + 198 Protein_176 colicin V -
D2J89_RS25075 (148369) 148369..150546 + 2178 WP_001222186.1 siderophore salmochelin receptor IroN -
D2J89_RS25080 (150591) 150591..151547 - 957 WP_064055648.1 catecholate siderophore esterase IroE -
D2J89_RS25085 (151632) 151632..152861 - 1230 WP_000933675.1 catecholate siderophore esterase IroD -
D2J89_RS25090 (152965) 152965..156624 - 3660 WP_001111199.1 salmochelin/enterobactin export ABC transporter IroC -
D2J89_RS25095 (156764) 156764..157879 - 1116 WP_001318220.1 salmochelin biosynthesis C-glycosyltransferase IroB -
D2J89_RS25100 (159190) 159190..160216 - 1027 Protein_183 integrase core domain-containing protein -
D2J89_RS25105 (160770) 160770..160969 + 200 Protein_184 lysis protein -
D2J89_RS25110 (161027) 161027..161320 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
D2J89_RS25115 (161947) 161947..163183 + 1237 Protein_186 IS3-like element IS2 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance