MGE detailed information
MGE type: Genomic_island MGE length: 17764 bp
Accession: NZ_CP031859 Location: 1917117..1934880 Organism: Actinobacillus pleuropneumoniae strain HS143 Replicon: chromosome
Accession: NZ_CP031859 Location: 1917117..1934880 Organism: Actinobacillus pleuropneumoniae strain HS143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1108_RS08810 (D1108_08865) | 1912517..1912789 | - | 273 | WP_005599206.1 | PTS sugar transporter subunit IIB | - |
| D1108_RS08815 (D1108_08870) | 1913092..1913505 | + | 414 | WP_005599209.1 | preprotein translocase subunit SecE | - |
| D1108_RS08820 (D1108_08875) | 1913507..1914070 | + | 564 | WP_005599210.1 | transcription termination/antitermination protein NusG | - |
| D1108_RS08825 (D1108_08880) | 1914357..1914785 | + | 429 | WP_005599211.1 | 50S ribosomal protein L11 | - |
| D1108_RS08830 (D1108_08885) | 1914790..1915479 | + | 690 | WP_005599212.1 | 50S ribosomal protein L1 | - |
| D1108_RS08835 (D1108_08890) | 1915768..1916259 | + | 492 | WP_005619364.1 | 50S ribosomal protein L10 | - |
| D1108_RS08840 (D1108_08895) | 1916320..1916688 | + | 369 | WP_005599214.1 | 50S ribosomal protein L7/L12 | - |
| D1108_RS08845 (D1108_08900) | 1916852..1917124 | + | 273 | WP_005599215.1 | helix-turn-helix transcriptional regulator | - |
| D1108_RS08850 (D1108_08905) | 1917129..1918385 | + | 1257 | WP_005613295.1 | type II toxin-antitoxin system HipA family toxin | - |
| D1108_RS08855 (D1108_08910) | 1918544..1918762 | + | 219 | WP_005599219.1 | hypothetical protein | - |
| D1108_RS08860 (D1108_08915) | 1918773..1919312 | + | 540 | WP_005619368.1 | hypothetical protein | - |
| D1108_RS08865 (D1108_08920) | 1919387..1919701 | + | 315 | WP_005602530.1 | hypothetical protein | - |
| D1108_RS08870 (D1108_08925) | 1919717..1920583 | + | 867 | WP_005602531.1 | hypothetical protein | - |
| D1108_RS08875 (D1108_08930) | 1920884..1924912 | + | 4029 | WP_012263369.1 | DNA-directed RNA polymerase subunit beta | - |
| D1108_RS08880 (D1108_08935) | 1925038..1929309 | + | 4272 | WP_005609152.1 | DNA-directed RNA polymerase subunit beta' | - |
| D1108_RS08885 (D1108_08940) | 1929471..1930886 | + | 1416 | WP_005605761.1 | AAA family ATPase | - |
| D1108_RS08890 (D1108_08945) | 1930879..1931451 | + | 573 | WP_005620147.1 | hypothetical protein | - |
| D1108_RS08895 | 1931824..1931964 | - | 141 | WP_005602535.1 | hypothetical protein | - |
| D1108_RS08900 (D1108_08955) | 1932072..1932302 | + | 231 | WP_005616131.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D1108_RS08905 (D1108_08960) | 1932302..1932700 | + | 399 | WP_012263372.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| D1108_RS08910 (D1108_08965) | 1932836..1933252 | - | 417 | WP_012263373.1 | DUF417 family protein | - |
| D1108_RS08915 (D1108_08970) | 1933498..1934148 | + | 651 | WP_012263374.1 | DUF2202 domain-containing protein | - |
| D1108_RS08920 (D1108_08975) | 1934221..1934880 | - | 660 | WP_005605767.1 | hypothetical protein | - |
| D1108_RS08925 (D1108_08980) | 1935194..1936516 | - | 1323 | WP_012263375.1 | HslU--HslV peptidase ATPase subunit | - |
| D1108_RS08930 (D1108_08985) | 1936662..1937183 | - | 522 | WP_005613306.1 | ATP-dependent protease subunit HslV | - |
| D1108_RS08935 (D1108_08990) | 1937261..1937974 | - | 714 | WP_237593392.1 | DNA/RNA nuclease SfsA | - |
| D1108_RS08940 (D1108_08995) | 1938281..1938673 | - | 393 | WP_237593393.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Actinobacillus pleuropneumoniae serovar 3 str. JL03 | Genomic island | TA4922, TA22622 | NC_010278 | 1913969..1931996 | 0.001 |