MGE detailed information
MGE type: Genomic_island MGE length: 47432 bp
Accession: NZ_CP031781 Location: 1321718..1369149 Organism: Vibrio parahaemolyticus strain VPD14 Replicon: chromosome
Accession: NZ_CP031781 Location: 1321718..1369149 Organism: Vibrio parahaemolyticus strain VPD14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0853_RS06575 () | 1317810..1318850 | + | 1041 | WP_005483263.1 | YcjF family protein | - |
| D0853_RS06580 () | 1318951..1320495 | + | 1545 | WP_005483314.1 | transcriptional regulator TyrR | - |
| D0853_RS06585 () | 1320531..1321115 | + | 585 | WP_005458831.1 | ribosomal protein S5-alanine N-acetyltransferase | - |
| D0853_RS06590 () | 1321117..1321704 | + | 588 | WP_005458832.1 | HD domain-containing protein | - |
| D0853_RS06595 () | 1321718..1322191 | + | 474 | WP_005458833.1 | DUF2947 domain-containing protein | - |
| D0853_RS06600 () | 1322242..1323204 | - | 963 | WP_011105976.1 | IS91 family transposase ISWz1 | Transposase |
| D0853_RS25640 () | 1323822..1323959 | + | 138 | WP_029795349.1 | DUF3265 domain-containing protein | - |
| D0853_RS06620 () | 1324033..1324446 | + | 414 | WP_005483188.1 | VOC family protein | - |
| D0853_RS06625 () | 1324617..1325252 | + | 636 | WP_005483168.1 | LysE family transporter | - |
| D0853_RS06630 () | 1325270..1325389 | + | 120 | Protein_1128 | DUF3265 domain-containing protein | - |
| D0853_RS06635 () | 1325392..1325850 | + | 459 | WP_005483220.1 | GNAT family N-acetyltransferase | - |
| D0853_RS06640 () | 1325852..1325968 | + | 117 | WP_005483184.1 | DUF3265 domain-containing protein | - |
| D0853_RS06645 () | 1325997..1326506 | + | 510 | WP_005483274.1 | hypothetical protein | VF |
| D0853_RS06650 () | 1326805..1326984 | + | 180 | WP_005483243.1 | DUF645 family protein | - |
| D0853_RS06660 () | 1327099..1327221 | + | 123 | WP_011105972.1 | hypothetical protein | - |
| D0853_RS06665 () | 1327197..1327739 | + | 543 | WP_005483282.1 | hypothetical protein | - |
| D0853_RS06670 () | 1327736..1327846 | + | 111 | WP_154581842.1 | DUF3265 domain-containing protein | - |
| D0853_RS06675 () | 1327880..1328287 | + | 408 | WP_005490677.1 | hypothetical protein | - |
| D0853_RS06680 () | 1328434..1329261 | + | 828 | WP_005483178.1 | TIGR02391 family protein | - |
| D0853_RS06685 () | 1329402..1329803 | + | 402 | WP_005483261.1 | HIT family protein | - |
| D0853_RS06690 () | 1329838..1329930 | + | 93 | WP_017045846.1 | DUF3265 domain-containing protein | - |
| D0853_RS06695 () | 1330028..1330561 | + | 534 | WP_005483198.1 | hypothetical protein | - |
| D0853_RS06700 () | 1330576..1330668 | + | 93 | WP_072833197.1 | DUF3265 domain-containing protein | - |
| D0853_RS06705 () | 1330795..1331433 | + | 639 | WP_005483174.1 | EcsC family protein | - |
| D0853_RS06710 () | 1331448..1331540 | + | 93 | WP_072833185.1 | DUF3265 domain-containing protein | - |
| D0853_RS06715 () | 1331585..1332001 | + | 417 | WP_021451209.1 | GNAT family N-acetyltransferase | - |
| D0853_RS06720 () | 1332030..1332119 | + | 90 | WP_072833189.1 | DUF3265 domain-containing protein | - |
| D0853_RS06725 () | 1332256..1332495 | + | 240 | WP_005483258.1 | hypothetical protein | - |
| D0853_RS06730 () | 1332634..1332906 | + | 273 | WP_029853404.1 | hypothetical protein | - |
| D0853_RS06735 () | 1333053..1333727 | + | 675 | WP_005483286.1 | hypothetical protein | - |
| D0853_RS06740 () | 1333939..1334337 | + | 399 | WP_005483218.1 | DUF1311 domain-containing protein | - |
| D0853_RS06750 () | 1334471..1335145 | + | 675 | WP_005483207.1 | hypothetical protein | - |
| D0853_RS06755 () | 1335284..1335805 | + | 522 | WP_005483288.1 | GNAT family N-acetyltransferase | - |
| D0853_RS06760 () | 1335812..1335928 | + | 117 | WP_080931826.1 | DUF3265 domain-containing protein | - |
| D0853_RS06765 () | 1335957..1336235 | - | 279 | WP_005483176.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| D0853_RS06770 () | 1336232..1336516 | - | 285 | WP_005483196.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D0853_RS06775 () | 1336593..1336684 | + | 92 | Protein_1155 | DUF3265 domain-containing protein | - |
| D0853_RS06780 () | 1336713..1337351 | + | 639 | WP_005483241.1 | hypothetical protein | - |
| D0853_RS06785 () | 1337335..1337457 | + | 123 | WP_021451208.1 | DUF3265 domain-containing protein | - |
| D0853_RS06790 () | 1337485..1338066 | + | 582 | WP_005483293.1 | hypothetical protein | - |
| D0853_RS06795 () | 1338208..1338720 | + | 513 | WP_024699234.1 | hypothetical protein | - |
| D0853_RS06800 () | 1338748..1338840 | + | 93 | WP_011105963.1 | DUF3265 domain-containing protein | - |
| D0853_RS06815 () | 1339449..1339958 | + | 510 | WP_005483274.1 | hypothetical protein | VF |
| D0853_RS06825 () | 1340096..1340470 | + | 375 | WP_005483170.1 | hypothetical protein | - |
| D0853_RS06830 () | 1340499..1340576 | + | 78 | WP_072833152.1 | DUF3265 domain-containing protein | - |
| D0853_RS06835 () | 1340604..1341080 | + | 477 | WP_005483302.1 | GNAT family N-acetyltransferase | - |
| D0853_RS06840 () | 1341077..1341199 | + | 123 | WP_078511351.1 | DUF3265 domain-containing protein | - |
| D0853_RS06845 () | 1341244..1341528 | + | 285 | WP_005483310.1 | nucleotide pyrophosphohydrolase | - |
| D0853_RS06850 () | 1341536..1341646 | + | 111 | WP_082798391.1 | DUF3265 domain-containing protein | - |
| D0853_RS06855 () | 1341675..1341953 | - | 279 | WP_005483280.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| D0853_RS06860 () | 1341950..1342234 | - | 285 | WP_005483268.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D0853_RS25830 () | 1342311..1342403 | + | 93 | WP_072833191.1 | DUF3265 domain-containing protein | - |
| D0853_RS06865 () | 1342430..1342702 | + | 273 | WP_005462157.1 | nicotinamide mononucleotide transporter | - |
| D0853_RS25835 () | 1342734..1342823 | + | 90 | WP_072833190.1 | DUF3265 domain-containing protein | - |
| D0853_RS06875 () | 1342856..1343398 | + | 543 | WP_005464345.1 | GNAT family N-acetyltransferase | - |
| D0853_RS25660 () | 1343427..1343567 | + | 141 | WP_162828790.1 | hypothetical protein | - |
| D0853_RS06885 () | 1343542..1344363 | + | 822 | WP_005464673.1 | DUF1669 domain-containing protein | - |
| D0853_RS06895 () | 1344434..1345204 | + | 771 | WP_005464405.1 | CBS domain-containing protein | - |
| D0853_RS06900 () | 1345227..1345319 | + | 93 | WP_005464677.1 | DUF3265 domain-containing protein | - |
| D0853_RS06905 () | 1345417..1345950 | + | 534 | WP_005483198.1 | hypothetical protein | - |
| D0853_RS06910 () | 1345965..1346057 | + | 93 | WP_072833197.1 | DUF3265 domain-containing protein | - |
| D0853_RS06915 () | 1346021..1347190 | + | 1170 | WP_005483289.1 | hypothetical protein | - |
| D0853_RS06920 () | 1347214..1347306 | + | 93 | WP_011105955.1 | DUF3265 domain-containing protein | - |
| D0853_RS06925 () | 1347409..1347663 | + | 255 | WP_005483180.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| D0853_RS06930 () | 1347656..1347925 | + | 270 | WP_005464459.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| D0853_RS06935 () | 1348090..1348470 | + | 381 | WP_005467118.1 | energy transducer TonB | - |
| D0853_RS06940 () | 1348498..1348587 | + | 90 | WP_072833196.1 | DUF3265 domain-containing protein | - |
| D0853_RS06955 () | 1349165..1349611 | + | 447 | WP_024699215.1 | hypothetical protein | - |
| D0853_RS06960 () | 1349615..1349731 | + | 117 | WP_161609362.1 | DUF3265 domain-containing protein | - |
| D0853_RS06965 () | 1349764..1350165 | + | 402 | WP_005483261.1 | HIT family protein | - |
| D0853_RS06970 () | 1350200..1350292 | + | 93 | WP_017045846.1 | DUF3265 domain-containing protein | - |
| D0853_RS25665 () | 1350495..1350701 | + | 207 | WP_005462168.1 | hypothetical protein | - |
| D0853_RS06980 () | 1350781..1350912 | + | 132 | WP_078532947.1 | DUF3265 domain-containing protein | - |
| D0853_RS06985 () | 1351034..1351510 | + | 477 | WP_017449567.1 | hypothetical protein | - |
| D0853_RS06990 () | 1351500..1351592 | + | 93 | WP_072833112.1 | DUF3265 domain-containing protein | - |
| D0853_RS06995 () | 1351630..1352019 | + | 390 | WP_005490691.1 | hypothetical protein | - |
| D0853_RS07000 () | 1352145..1353212 | + | 1068 | WP_005477775.1 | toll/interleukin-1 receptor domain-containing protein | - |
| D0853_RS25670 () | 1353740..1353877 | + | 138 | WP_029795349.1 | DUF3265 domain-containing protein | - |
| D0853_RS07020 () | 1354400..1355080 | + | 681 | WP_005477709.1 | tetratricopeptide repeat protein | - |
| D0853_RS25840 () | 1355100..1355192 | + | 93 | WP_005433818.1 | DUF3265 domain-containing protein | - |
| D0853_RS07030 () | 1355242..1355649 | + | 408 | WP_005466276.1 | OsmC family protein | - |
| D0853_RS07040 () | 1355798..1356136 | + | 339 | WP_005477736.1 | tRNA-binding protein | - |
| D0853_RS07045 () | 1356281..1356592 | + | 312 | WP_005477810.1 | antibiotic biosynthesis monooxygenase | - |
| D0853_RS07050 () | 1356607..1356699 | + | 93 | WP_072866292.1 | DUF3265 domain-containing protein | - |
| D0853_RS07055 () | 1356747..1357529 | + | 783 | WP_005462179.1 | hypothetical protein | - |
| D0853_RS07065 () | 1357670..1358050 | + | 381 | WP_005477828.1 | nuclear transport factor 2 family protein | - |
| D0853_RS07070 () | 1358078..1358170 | + | 93 | WP_011105944.1 | DUF3265 domain-containing protein | - |
| D0853_RS07080 () | 1358658..1358789 | + | 132 | WP_017420680.1 | DUF3265 domain-containing protein | - |
| D0853_RS25845 () | 1358826..1360376 | + | 1551 | WP_005462176.1 | hypothetical protein | - |
| D0853_RS07090 () | 1360406..1360498 | + | 93 | WP_072866293.1 | DUF3265 domain-containing protein | - |
| D0853_RS07095 () | 1360733..1361065 | + | 333 | WP_005477784.1 | hypothetical protein | - |
| D0853_RS07110 () | 1362555..1362737 | + | 183 | WP_078532942.1 | DUF3265 domain-containing protein | - |
| D0853_RS07115 () | 1362724..1363083 | + | 360 | WP_005477812.1 | VOC family protein | - |
| D0853_RS07125 () | 1363221..1363592 | + | 372 | WP_005462158.1 | RidA family protein | - |
| D0853_RS07130 () | 1363589..1363774 | + | 186 | WP_100069991.1 | DUF3265 domain-containing protein | - |
| D0853_RS07135 () | 1363740..1364567 | + | 828 | WP_005477844.1 | hypothetical protein | - |
| D0853_RS07140 () | 1364582..1364674 | + | 93 | WP_011105940.1 | DUF3265 domain-containing protein | - |
| D0853_RS07145 () | 1364714..1365259 | + | 546 | WP_029559183.1 | GNAT family N-acetyltransferase | - |
| D0853_RS07155 () | 1365851..1366123 | + | 273 | WP_029853404.1 | hypothetical protein | - |
| D0853_RS07160 () | 1366271..1366693 | + | 423 | WP_005477752.1 | hypothetical protein | - |
| D0853_RS07165 () | 1366859..1367374 | + | 516 | WP_005477694.1 | hypothetical protein | - |
| D0853_RS07170 () | 1367523..1367927 | + | 405 | WP_005477782.1 | GFA family protein | - |
| D0853_RS07175 () | 1368167..1368634 | + | 468 | WP_005464650.1 | cold shock domain-containing protein | - |
| D0853_RS07180 () | 1368865..1370015 | + | 1151 | WP_086026417.1 | IS3-like element ISVpa2 family transposase | - |
| D0853_RS07185 () | 1370045..1370368 | + | 324 | Protein_1223 | N-carbamoylputrescine amidase | - |
| D0853_RS07190 () | 1370381..1371463 | + | 1083 | WP_005464515.1 | agmatine deiminase | - |
| D0853_RS07195 () | 1371518..1372945 | + | 1428 | WP_005477851.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|